EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013831 (Gene tree)
Gene ID: 101944964
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 88501 bases
Position: chrKK082952.1:2336079-2424579
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019093	RRM_1	PF00076.22	1e-39	1	3
ENSCPBP00000019093	RRM_1	PF00076.22	1e-39	2	3
ENSCPBP00000019093	RRM_1	PF00076.22	1e-39	3	3
ENSCPBP00000019094	RRM_1	PF00076.22	1e-39	1	3
ENSCPBP00000019094	RRM_1	PF00076.22	1e-39	2	3
ENSCPBP00000019094	RRM_1	PF00076.22	1e-39	3	3
ENSCPBP00000019096	RRM_1	PF00076.22	1e-39	1	3
ENSCPBP00000019096	RRM_1	PF00076.22	1e-39	2	3
ENSCPBP00000019096	RRM_1	PF00076.22	1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000022502	RBM47-203	1903	-	ENSCPBP00000019096	596 (aa)	XP_005286430	UPI000388BA19
ENSCPBT00000022500	RBM47-202	1887	-	ENSCPBP00000019094	596 (aa)	XP_005286430	UPI000388BA19
ENSCPBT00000022499	RBM47-201	1936	-	ENSCPBP00000019093	596 (aa)	XP_005286430	UPI000388BA19

Gene Model

Click here to download ENSCPBG00000013831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013831	RBM47	72	58.370	ENSCPBG00000026464	A1CF	75	58.370
ENSCPBG00000013831	RBM47	53	71.118	ENSCPBG00000009314	RBM46	71	70.370
ENSCPBG00000013831	RBM47	52	54.516	ENSCPBG00000019850	SYNCRIP	80	46.035
ENSCPBG00000013831	RBM47	54	55.280	ENSCPBG00000015533	HNRNPR	70	46.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013831	RBM47	100	89.500	ENSG00000163694	RBM47	100	93.088	Homo_sapiens
ENSCPBG00000013831	RBM47	100	79.104	ENSAPOG00000011062	rbm47	100	82.908	Acanthochromis_polyacanthus
ENSCPBG00000013831	RBM47	100	88.870	ENSAMEG00000009672	RBM47	100	89.037	Ailuropoda_melanoleuca
ENSCPBG00000013831	RBM47	100	79.000	ENSACIG00000011531	rbm47	100	79.000	Amphilophus_citrinellus
ENSCPBG00000013831	RBM47	100	79.833	ENSAOCG00000022245	rbm47	100	82.908	Amphiprion_ocellaris
ENSCPBG00000013831	RBM47	100	79.833	ENSAPEG00000018304	rbm47	100	82.908	Amphiprion_percula
ENSCPBG00000013831	RBM47	100	78.793	ENSATEG00000018400	rbm47	100	77.941	Anabas_testudineus
ENSCPBG00000013831	RBM47	100	91.806	ENSAPLG00000013974	RBM47	100	90.970	Anas_platyrhynchos
ENSCPBG00000013831	RBM47	100	90.183	ENSACAG00000011833	RBM47	100	90.349	Anolis_carolinensis
ENSCPBG00000013831	RBM47	100	90.000	ENSANAG00000029440	RBM47	100	92.819	Aotus_nancymaae
ENSCPBG00000013831	RBM47	100	77.977	ENSACLG00000016902	rbm47	100	84.536	Astatotilapia_calliptera
ENSCPBG00000013831	RBM47	96	80.551	ENSAMXG00000021794	rbm47	100	77.850	Astyanax_mexicanus
ENSCPBG00000013831	RBM47	100	91.107	ENSBTAG00000002356	RBM47	100	91.443	Bos_taurus
ENSCPBG00000013831	RBM47	100	89.933	ENSCJAG00000019385	RBM47	100	92.553	Callithrix_jacchus
ENSCPBG00000013831	RBM47	96	88.870	ENSCAFG00000015898	RBM47	100	87.646	Canis_familiaris
ENSCPBG00000013831	RBM47	82	91.242	ENSCAFG00020010558	RBM47	94	89.153	Canis_lupus_dingo
ENSCPBG00000013831	RBM47	100	91.107	ENSCHIG00000026214	RBM47	100	91.443	Capra_hircus
ENSCPBG00000013831	RBM47	86	88.496	ENSTSYG00000033612	RBM47	93	88.496	Carlito_syrichta
ENSCPBG00000013831	RBM47	100	82.580	ENSCAPG00000008426	RBM47	100	82.580	Cavia_aperea
ENSCPBG00000013831	RBM47	100	88.610	ENSCPOG00000014100	RBM47	100	91.755	Cavia_porcellus
ENSCPBG00000013831	RBM47	99	62.104	ENSCCAG00000024397	-	99	61.937	Cebus_capucinus
ENSCPBG00000013831	RBM47	100	90.268	ENSCCAG00000030129	-	100	93.085	Cebus_capucinus
ENSCPBG00000013831	RBM47	100	89.933	ENSCATG00000042064	RBM47	100	93.085	Cercocebus_atys
ENSCPBG00000013831	RBM47	100	89.262	ENSCLAG00000001684	RBM47	100	91.223	Chinchilla_lanigera
ENSCPBG00000013831	RBM47	100	89.500	ENSCSAG00000017060	RBM47	100	90.000	Chlorocebus_sabaeus
ENSCPBG00000013831	RBM47	89	85.650	ENSCHOG00000011731	RBM47	88	86.323	Choloepus_hoffmanni
ENSCPBG00000013831	RBM47	100	90.268	ENSCANG00000019997	RBM47	100	93.085	Colobus_angolensis_palliatus
ENSCPBG00000013831	RBM47	89	86.508	ENSCGRG00001020102	-	100	86.508	Cricetulus_griseus_chok1gshd
ENSCPBG00000013831	RBM47	100	88.020	ENSCGRG00001000623	-	100	87.188	Cricetulus_griseus_chok1gshd
ENSCPBG00000013831	RBM47	89	86.243	ENSCGRG00000014760	-	100	86.243	Cricetulus_griseus_crigri
ENSCPBG00000013831	RBM47	100	87.188	ENSCGRG00000007762	-	100	88.608	Cricetulus_griseus_crigri
ENSCPBG00000013831	RBM47	100	76.167	ENSCSEG00000004545	rbm47	100	76.910	Cynoglossus_semilaevis
ENSCPBG00000013831	RBM47	100	77.759	ENSCVAG00000020144	rbm47	100	83.418	Cyprinodon_variegatus
ENSCPBG00000013831	RBM47	96	80.969	ENSDARG00000061985	rbm47	100	78.723	Danio_rerio
ENSCPBG00000013831	RBM47	100	88.591	ENSDNOG00000046854	RBM47	100	89.430	Dasypus_novemcinctus
ENSCPBG00000013831	RBM47	100	89.369	ENSDORG00000010144	Rbm47	100	89.369	Dipodomys_ordii
ENSCPBG00000013831	RBM47	97	90.411	ENSETEG00000009194	RBM47	100	89.667	Echinops_telfairi
ENSCPBG00000013831	RBM47	99	58.609	ENSEBUG00000011912	rbm47	99	59.106	Eptatretus_burgeri
ENSCPBG00000013831	RBM47	100	90.772	ENSEASG00005008443	RBM47	100	91.107	Equus_asinus_asinus
ENSCPBG00000013831	RBM47	100	90.772	ENSECAG00000004400	RBM47	100	91.107	Equus_caballus
ENSCPBG00000013831	RBM47	75	90.909	ENSEEUG00000001194	RBM47	75	90.909	Erinaceus_europaeus
ENSCPBG00000013831	RBM47	100	74.516	ENSELUG00000006148	rbm47	100	82.368	Esox_lucius
ENSCPBG00000013831	RBM47	100	90.604	ENSFCAG00000012399	RBM47	100	90.436	Felis_catus
ENSCPBG00000013831	RBM47	100	93.813	ENSFALG00000002861	RBM47	100	93.980	Ficedula_albicollis
ENSCPBG00000013831	RBM47	100	87.940	ENSFDAG00000016326	RBM47	100	89.096	Fukomys_damarensis
ENSCPBG00000013831	RBM47	100	79.466	ENSFHEG00000007938	rbm47	100	78.428	Fundulus_heteroclitus
ENSCPBG00000013831	RBM47	100	75.000	ENSGMOG00000014802	rbm47	100	75.000	Gadus_morhua
ENSCPBG00000013831	RBM47	63	96.277	ENSGALG00000014267	RBM47	99	96.277	Gallus_gallus
ENSCPBG00000013831	RBM47	63	85.904	ENSGAFG00000020571	rbm47	98	85.904	Gambusia_affinis
ENSCPBG00000013831	RBM47	100	75.244	ENSGACG00000016223	rbm47	100	80.357	Gasterosteus_aculeatus
ENSCPBG00000013831	RBM47	100	99.664	ENSGAGG00000020051	RBM47	100	99.664	Gopherus_agassizii
ENSCPBG00000013831	RBM47	100	89.933	ENSGGOG00000001367	RBM47	100	93.085	Gorilla_gorilla
ENSCPBG00000013831	RBM47	100	77.561	ENSHBUG00000003520	rbm47	100	84.536	Haplochromis_burtoni
ENSCPBG00000013831	RBM47	85	78.906	ENSHGLG00000016914	RBM47	100	89.241	Heterocephalus_glaber_female
ENSCPBG00000013831	RBM47	100	88.423	ENSHGLG00100014028	-	100	90.426	Heterocephalus_glaber_male
ENSCPBG00000013831	RBM47	100	79.698	ENSHGLG00100003071	-	100	79.530	Heterocephalus_glaber_male
ENSCPBG00000013831	RBM47	99	78.094	ENSHCOG00000002074	rbm47	99	82.653	Hippocampus_comes
ENSCPBG00000013831	RBM47	100	79.700	ENSIPUG00000004743	rbm47	100	79.967	Ictalurus_punctatus
ENSCPBG00000013831	RBM47	100	89.000	ENSSTOG00000004727	RBM47	100	88.833	Ictidomys_tridecemlineatus
ENSCPBG00000013831	RBM47	100	87.874	ENSJJAG00000013823	Rbm47	100	88.206	Jaculus_jaculus
ENSCPBG00000013831	RBM47	100	79.167	ENSKMAG00000000084	rbm47	100	82.398	Kryptolebias_marmoratus
ENSCPBG00000013831	RBM47	100	78.702	ENSLBEG00000008436	rbm47	100	81.633	Labrus_bergylta
ENSCPBG00000013831	RBM47	100	88.255	ENSLACG00000007196	RBM47	100	88.423	Latimeria_chalumnae
ENSCPBG00000013831	RBM47	100	85.762	ENSLOCG00000012966	rbm47	95	85.930	Lepisosteus_oculatus
ENSCPBG00000013831	RBM47	100	89.983	ENSLAFG00000011998	RBM47	100	89.816	Loxodonta_africana
ENSCPBG00000013831	RBM47	100	89.933	ENSMFAG00000037967	RBM47	100	93.085	Macaca_fascicularis
ENSCPBG00000013831	RBM47	100	89.500	ENSMMUG00000012036	RBM47	100	92.228	Macaca_mulatta
ENSCPBG00000013831	RBM47	100	89.933	ENSMNEG00000040774	RBM47	100	93.085	Macaca_nemestrina
ENSCPBG00000013831	RBM47	100	94.921	ENSMLEG00000041432	RBM47	100	94.921	Mandrillus_leucophaeus
ENSCPBG00000013831	RBM47	100	78.105	ENSMAMG00000019143	rbm47	99	83.548	Mastacembelus_armatus
ENSCPBG00000013831	RBM47	100	77.977	ENSMZEG00005023659	rbm47	99	84.536	Maylandia_zebra
ENSCPBG00000013831	RBM47	100	95.485	ENSMGAG00000012226	RBM47	100	95.151	Meleagris_gallopavo
ENSCPBG00000013831	RBM47	100	88.167	ENSMAUG00000006493	Rbm47	100	89.241	Mesocricetus_auratus
ENSCPBG00000013831	RBM47	100	83.893	ENSMICG00000026417	RBM47	100	85.904	Microcebus_murinus
ENSCPBG00000013831	RBM47	100	88.314	ENSMOCG00000021170	Rbm47	100	88.608	Microtus_ochrogaster
ENSCPBG00000013831	RBM47	100	78.595	ENSMMOG00000007260	rbm47	100	77.905	Mola_mola
ENSCPBG00000013831	RBM47	51	84.566	ENSMODG00000015426	-	98	83.228	Monodelphis_domestica
ENSCPBG00000013831	RBM47	100	91.987	ENSMODG00000007003	RBM47	100	91.820	Monodelphis_domestica
ENSCPBG00000013831	RBM47	100	82.215	ENSMODG00000020561	-	100	82.215	Monodelphis_domestica
ENSCPBG00000013831	RBM47	100	77.870	ENSMALG00000005167	rbm47	100	82.564	Monopterus_albus
ENSCPBG00000013831	RBM47	100	88.462	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.223	Mus_caroli
ENSCPBG00000013831	RBM47	100	88.462	ENSMUSG00000070780	Rbm47	100	91.489	Mus_musculus
ENSCPBG00000013831	RBM47	100	88.127	MGP_PahariEiJ_G0017040	Rbm47	100	90.957	Mus_pahari
ENSCPBG00000013831	RBM47	100	88.758	MGP_SPRETEiJ_G0028253	Rbm47	100	91.489	Mus_spretus
ENSCPBG00000013831	RBM47	100	89.649	ENSMPUG00000006177	RBM47	94	89.816	Mustela_putorius_furo
ENSCPBG00000013831	RBM47	100	89.615	ENSMLUG00000000889	RBM47	100	90.117	Myotis_lucifugus
ENSCPBG00000013831	RBM47	100	88.000	ENSNGAG00000003325	Rbm47	100	88.333	Nannospalax_galili
ENSCPBG00000013831	RBM47	100	77.850	ENSNBRG00000015092	rbm47	100	77.850	Neolamprologus_brichardi
ENSCPBG00000013831	RBM47	100	89.933	ENSNLEG00000017151	RBM47	100	93.085	Nomascus_leucogenys
ENSCPBG00000013831	RBM47	72	89.535	ENSMEUG00000009516	-	99	89.535	Notamacropus_eugenii
ENSCPBG00000013831	RBM47	76	93.802	ENSOPRG00000016507	-	75	93.802	Ochotona_princeps
ENSCPBG00000013831	RBM47	100	89.094	ENSODEG00000004873	RBM47	100	89.262	Octodon_degus
ENSCPBG00000013831	RBM47	100	78.176	ENSONIG00000009061	rbm47	100	77.488	Oreochromis_niloticus
ENSCPBG00000013831	RBM47	100	87.375	ENSOANG00000008978	RBM47	100	88.870	Ornithorhynchus_anatinus
ENSCPBG00000013831	RBM47	100	89.782	ENSOCUG00000012034	RBM47	100	90.117	Oryctolagus_cuniculus
ENSCPBG00000013831	RBM47	100	78.094	ENSORLG00000005847	rbm47	100	83.033	Oryzias_latipes
ENSCPBG00000013831	RBM47	100	78.261	ENSORLG00020005154	rbm47	100	83.033	Oryzias_latipes_hni
ENSCPBG00000013831	RBM47	100	82.776	ENSORLG00015000066	rbm47	100	82.776	Oryzias_latipes_hsok
ENSCPBG00000013831	RBM47	100	79.299	ENSOMEG00000010730	rbm47	100	78.428	Oryzias_melastigma
ENSCPBG00000013831	RBM47	100	89.316	ENSOGAG00000029367	-	100	89.649	Otolemur_garnettii
ENSCPBG00000013831	RBM47	100	81.879	ENSOGAG00000025193	-	100	82.383	Otolemur_garnettii
ENSCPBG00000013831	RBM47	100	82.550	ENSOARG00000012711	RBM47	100	83.054	Ovis_aries
ENSCPBG00000013831	RBM47	100	89.765	ENSPPAG00000029763	RBM47	100	90.101	Pan_paniscus
ENSCPBG00000013831	RBM47	100	87.248	ENSPPRG00000012873	RBM47	99	92.553	Panthera_pardus
ENSCPBG00000013831	RBM47	85	87.574	ENSPTIG00000017046	RBM47	100	87.771	Panthera_tigris_altaica
ENSCPBG00000013831	RBM47	100	89.933	ENSPTRG00000016006	RBM47	100	93.085	Pan_troglodytes
ENSCPBG00000013831	RBM47	100	89.933	ENSPANG00000005980	RBM47	100	93.085	Papio_anubis
ENSCPBG00000013831	RBM47	96	77.682	ENSPKIG00000005037	rbm47	100	75.658	Paramormyrops_kingsleyae
ENSCPBG00000013831	RBM47	96	76.552	ENSPKIG00000013431	RBM47	98	83.721	Paramormyrops_kingsleyae
ENSCPBG00000013831	RBM47	89	98.106	ENSPSIG00000017516	RBM47	97	98.106	Pelodiscus_sinensis
ENSCPBG00000013831	RBM47	100	76.756	ENSPMGG00000018540	rbm47	100	77.667	Periophthalmus_magnuspinnatus
ENSCPBG00000013831	RBM47	100	87.833	ENSPEMG00000011088	Rbm47	100	88.000	Peromyscus_maniculatus_bairdii
ENSCPBG00000013831	RBM47	96	81.928	ENSPFOG00000007997	rbm47	100	77.958	Poecilia_formosa
ENSCPBG00000013831	RBM47	96	81.897	ENSPLAG00000002072	rbm47	100	85.638	Poecilia_latipinna
ENSCPBG00000013831	RBM47	100	80.731	ENSPMEG00000017492	rbm47	100	82.908	Poecilia_mexicana
ENSCPBG00000013831	RBM47	96	81.552	ENSPREG00000008456	rbm47	100	85.638	Poecilia_reticulata
ENSCPBG00000013831	RBM47	98	77.852	ENSPPYG00000014688	RBM47	100	77.685	Pongo_abelii
ENSCPBG00000013831	RBM47	81	92.269	ENSPCAG00000011879	RBM47	81	92.519	Procavia_capensis
ENSCPBG00000013831	RBM47	100	85.570	ENSPCOG00000023451	RBM47	100	87.766	Propithecus_coquereli
ENSCPBG00000013831	RBM47	100	89.482	ENSPVAG00000003812	RBM47	100	90.150	Pteropus_vampyrus
ENSCPBG00000013831	RBM47	100	77.597	ENSPNYG00000022868	rbm47	100	77.273	Pundamilia_nyererei
ENSCPBG00000013831	RBM47	100	76.998	ENSPNAG00000007940	rbm47	100	77.814	Pygocentrus_nattereri
ENSCPBG00000013831	RBM47	100	88.462	ENSRNOG00000002408	Rbm47	100	88.462	Rattus_norvegicus
ENSCPBG00000013831	RBM47	100	90.268	ENSRBIG00000039601	RBM47	100	93.085	Rhinopithecus_bieti
ENSCPBG00000013831	RBM47	100	90.268	ENSRROG00000044696	RBM47	100	93.085	Rhinopithecus_roxellana
ENSCPBG00000013831	RBM47	100	87.248	ENSSBOG00000028475	RBM47	100	92.784	Saimiri_boliviensis_boliviensis
ENSCPBG00000013831	RBM47	100	92.630	ENSSHAG00000017576	RBM47	100	92.965	Sarcophilus_harrisii
ENSCPBG00000013831	RBM47	100	74.507	ENSSFOG00015012445	rbm47	100	74.836	Scleropages_formosus
ENSCPBG00000013831	RBM47	100	75.712	ENSSFOG00015024101	RBM47	100	75.874	Scleropages_formosus
ENSCPBG00000013831	RBM47	100	76.672	ENSSMAG00000009744	rbm47	100	82.051	Scophthalmus_maximus
ENSCPBG00000013831	RBM47	100	79.967	ENSSDUG00000022684	rbm47	100	79.264	Seriola_dumerili
ENSCPBG00000013831	RBM47	100	80.667	ENSSLDG00000003109	rbm47	100	82.576	Seriola_lalandi_dorsalis
ENSCPBG00000013831	RBM47	85	91.499	ENSSARG00000001735	RBM47	75	91.499	Sorex_araneus
ENSCPBG00000013831	RBM47	100	94.631	ENSSPUG00000007515	RBM47	100	96.277	Sphenodon_punctatus
ENSCPBG00000013831	RBM47	100	80.699	ENSSPAG00000001257	rbm47	100	83.418	Stegastes_partitus
ENSCPBG00000013831	RBM47	100	91.275	ENSSSCG00000008796	RBM47	100	91.107	Sus_scrofa
ENSCPBG00000013831	RBM47	100	93.970	ENSTGUG00000008705	RBM47	100	94.305	Taeniopygia_guttata
ENSCPBG00000013831	RBM47	100	78.130	ENSTRUG00000014050	rbm47	100	77.592	Takifugu_rubripes
ENSCPBG00000013831	RBM47	100	76.923	ENSTNIG00000006127	rbm47	100	76.923	Tetraodon_nigroviridis
ENSCPBG00000013831	RBM47	77	85.638	ENSTBEG00000001607	RBM47	76	86.170	Tupaia_belangeri
ENSCPBG00000013831	RBM47	100	90.604	ENSTTRG00000002839	RBM47	100	90.604	Tursiops_truncatus
ENSCPBG00000013831	RBM47	100	89.983	ENSUAMG00000021346	RBM47	100	89.482	Ursus_americanus
ENSCPBG00000013831	RBM47	57	89.726	ENSVPAG00000000641	-	57	89.726	Vicugna_pacos
ENSCPBG00000013831	RBM47	96	89.895	ENSVVUG00000014774	RBM47	100	88.629	Vulpes_vulpes
ENSCPBG00000013831	RBM47	100	87.479	ENSXETG00000012802	rbm47	100	87.646	Xenopus_tropicalis
ENSCPBG00000013831	RBM47	88	85.638	ENSXCOG00000000780	rbm47	100	85.638	Xiphophorus_couchianus
ENSCPBG00000013831	RBM47	100	79.633	ENSXMAG00000009874	rbm47	100	82.653	Xiphophorus_maculatus