EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000013922 (Gene tree)
Gene ID: 101944070
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 53420 bases
Position: chrKK083223.1:304932-358351
Accession: 29167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019237	R3H	PF01424.22	2.4e-10	1	1
ENSCPBP00000019233	R3H	PF01424.22	2.8e-10	1	1
ENSCPBP00000019235	R3H	PF01424.22	2.9e-10	1	1
ENSCPBP00000019227	R3H	PF01424.22	2.9e-10	1	1
ENSCPBP00000019230	R3H	PF01424.22	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000022656	R3HDM2-202	3192	XM_008175547	ENSCPBP00000019230	1038 (aa)	XP_008173769	UPI000389162F
ENSCPBT00000022665	R3HDM2-205	3022	-	ENSCPBP00000019237	997 (aa)	-	-
ENSCPBT00000022663	R3HDM2-204	3150	-	ENSCPBP00000019235	1024 (aa)	-	-
ENSCPBT00000022653	R3HDM2-201	3246	XM_008175541	ENSCPBP00000019227	1056 (aa)	XP_008173763	UPI000388B313
ENSCPBT00000022661	R3HDM2-203	3156	XM_008175548	ENSCPBP00000019233	1026 (aa)	XP_008173770	UPI000388A75D

Gene Model

Click here to download ENSCPBG00000013922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000013922	R3HDM2	66	57.816	ENSCPBG00000013513	ARPP21	82	55.245
ENSCPBG00000013922	R3HDM2	81	76.667	ENSCPBG00000009645	R3HDM1	100	54.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013922	R3HDM2	100	80.307	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSCPBG00000013922	R3HDM2	99	63.153	ENSAPOG00000020341	r3hdm2	95	65.789	Acanthochromis_polyacanthus
ENSCPBG00000013922	R3HDM2	54	39.085	ENSAPOG00000021873	-	76	41.831	Acanthochromis_polyacanthus
ENSCPBG00000013922	R3HDM2	100	79.944	ENSAMEG00000004812	R3HDM2	100	80.019	Ailuropoda_melanoleuca
ENSCPBG00000013922	R3HDM2	93	61.919	ENSACIG00000016146	r3hdm2	98	61.934	Amphilophus_citrinellus
ENSCPBG00000013922	R3HDM2	54	41.809	ENSAOCG00000003840	-	78	41.840	Amphiprion_ocellaris
ENSCPBG00000013922	R3HDM2	99	63.063	ENSAOCG00000023694	r3hdm2	95	65.470	Amphiprion_ocellaris
ENSCPBG00000013922	R3HDM2	99	63.143	ENSAPEG00000008851	r3hdm2	99	65.067	Amphiprion_percula
ENSCPBG00000013922	R3HDM2	54	41.468	ENSAPEG00000014325	-	78	41.667	Amphiprion_percula
ENSCPBG00000013922	R3HDM2	99	60.645	ENSATEG00000025024	r3hdm2	100	65.100	Anabas_testudineus
ENSCPBG00000013922	R3HDM2	64	77.489	ENSAPLG00000004298	R3HDM2	99	79.298	Anas_platyrhynchos
ENSCPBG00000013922	R3HDM2	100	83.061	ENSACAG00000006388	R3HDM2	100	83.542	Anolis_carolinensis
ENSCPBG00000013922	R3HDM2	100	80.288	ENSANAG00000025397	-	100	79.981	Aotus_nancymaae
ENSCPBG00000013922	R3HDM2	98	75.418	ENSANAG00000031310	-	100	75.098	Aotus_nancymaae
ENSCPBG00000013922	R3HDM2	99	62.993	ENSACLG00000019106	r3hdm2	95	65.851	Astatotilapia_calliptera
ENSCPBG00000013922	R3HDM2	94	58.824	ENSAMXG00000017180	r3hdm2	99	60.020	Astyanax_mexicanus
ENSCPBG00000013922	R3HDM2	100	78.998	ENSBTAG00000018361	R3HDM2	100	78.785	Bos_taurus
ENSCPBG00000013922	R3HDM2	100	80.462	ENSCJAG00000007365	R3HDM2	100	80.154	Callithrix_jacchus
ENSCPBG00000013922	R3HDM2	100	80.134	ENSCAFG00000000215	R3HDM2	100	80.211	Canis_familiaris
ENSCPBG00000013922	R3HDM2	100	79.683	ENSCAFG00020023713	R3HDM2	100	79.757	Canis_lupus_dingo
ENSCPBG00000013922	R3HDM2	100	79.757	ENSCHIG00000014022	R3HDM2	100	79.552	Capra_hircus
ENSCPBG00000013922	R3HDM2	100	79.079	ENSTSYG00000001449	R3HDM2	100	78.866	Carlito_syrichta
ENSCPBG00000013922	R3HDM2	100	79.439	ENSCPOG00000009217	R3HDM2	100	78.952	Cavia_porcellus
ENSCPBG00000013922	R3HDM2	89	79.870	ENSCCAG00000026083	R3HDM2	100	78.284	Cebus_capucinus
ENSCPBG00000013922	R3HDM2	100	80.403	ENSCATG00000036929	R3HDM2	100	80.096	Cercocebus_atys
ENSCPBG00000013922	R3HDM2	100	79.740	ENSCLAG00000011997	R3HDM2	100	79.647	Chinchilla_lanigera
ENSCPBG00000013922	R3HDM2	100	80.453	ENSCSAG00000004911	R3HDM2	100	80.151	Chlorocebus_sabaeus
ENSCPBG00000013922	R3HDM2	76	80.240	ENSCHOG00000005636	R3HDM2	91	80.439	Choloepus_hoffmanni
ENSCPBG00000013922	R3HDM2	100	79.925	ENSCANG00000043807	R3HDM2	100	79.626	Colobus_angolensis_palliatus
ENSCPBG00000013922	R3HDM2	100	79.353	ENSCGRG00001017324	R3hdm2	100	78.857	Cricetulus_griseus_chok1gshd
ENSCPBG00000013922	R3HDM2	100	79.353	ENSCGRG00000003862	R3hdm2	100	78.857	Cricetulus_griseus_crigri
ENSCPBG00000013922	R3HDM2	96	65.108	ENSCSEG00000010925	r3hdm2	100	63.250	Cynoglossus_semilaevis
ENSCPBG00000013922	R3HDM2	60	35.106	ENSCVAG00000007202	-	79	37.961	Cyprinodon_variegatus
ENSCPBG00000013922	R3HDM2	99	62.534	ENSCVAG00000009058	r3hdm2	100	60.751	Cyprinodon_variegatus
ENSCPBG00000013922	R3HDM2	94	60.985	ENSDARG00000102610	r3hdm2	99	62.124	Danio_rerio
ENSCPBG00000013922	R3HDM2	100	79.323	ENSDNOG00000015033	R3HDM2	100	78.519	Dasypus_novemcinctus
ENSCPBG00000013922	R3HDM2	95	76.813	ENSDORG00000011462	R3hdm2	99	77.096	Dipodomys_ordii
ENSCPBG00000013922	R3HDM2	100	80.558	ENSEASG00005007091	R3HDM2	100	80.354	Equus_asinus_asinus
ENSCPBG00000013922	R3HDM2	100	80.859	ENSECAG00000003157	R3HDM2	100	80.935	Equus_caballus
ENSCPBG00000013922	R3HDM2	98	62.186	ENSELUG00000015969	r3hdm2	100	60.171	Esox_lucius
ENSCPBG00000013922	R3HDM2	100	80.577	ENSFCAG00000000192	R3HDM2	99	80.437	Felis_catus
ENSCPBG00000013922	R3HDM2	89	76.649	ENSFALG00000000255	R3HDM2	100	77.106	Ficedula_albicollis
ENSCPBG00000013922	R3HDM2	100	79.592	ENSFDAG00000019385	R3HDM2	100	79.499	Fukomys_damarensis
ENSCPBG00000013922	R3HDM2	59	36.866	ENSFHEG00000007936	-	79	38.938	Fundulus_heteroclitus
ENSCPBG00000013922	R3HDM2	99	61.719	ENSFHEG00000016484	r3hdm2	95	64.778	Fundulus_heteroclitus
ENSCPBG00000013922	R3HDM2	95	63.593	ENSGMOG00000007961	r3hdm2	100	62.476	Gadus_morhua
ENSCPBG00000013922	R3HDM2	100	85.149	ENSGALG00000043736	R3HDM2	100	85.280	Gallus_gallus
ENSCPBG00000013922	R3HDM2	99	63.134	ENSGAFG00000013887	r3hdm2	100	61.227	Gambusia_affinis
ENSCPBG00000013922	R3HDM2	52	40.204	ENSGAFG00000015558	-	79	39.929	Gambusia_affinis
ENSCPBG00000013922	R3HDM2	95	66.059	ENSGACG00000006442	r3hdm2	100	66.251	Gasterosteus_aculeatus
ENSCPBG00000013922	R3HDM2	100	96.692	ENSGAGG00000017797	R3HDM2	100	96.595	Gopherus_agassizii
ENSCPBG00000013922	R3HDM2	100	80.211	ENSGGOG00000015007	R3HDM2	100	79.904	Gorilla_gorilla
ENSCPBG00000013922	R3HDM2	100	79.721	ENSHGLG00000010434	-	100	79.423	Heterocephalus_glaber_female
ENSCPBG00000013922	R3HDM2	89	70.410	ENSHGLG00000010421	-	97	69.978	Heterocephalus_glaber_female
ENSCPBG00000013922	R3HDM2	96	69.138	ENSHGLG00100018871	-	99	68.706	Heterocephalus_glaber_male
ENSCPBG00000013922	R3HDM2	100	79.628	ENSHGLG00100004183	-	100	79.330	Heterocephalus_glaber_male
ENSCPBG00000013922	R3HDM2	99	62.429	ENSHCOG00000001142	r3hdm2	92	65.064	Hippocampus_comes
ENSCPBG00000013922	R3HDM2	99	60.567	ENSIPUG00000023873	r3hdm2	95	63.506	Ictalurus_punctatus
ENSCPBG00000013922	R3HDM2	100	76.583	ENSSTOG00000013424	R3HDM2	100	76.635	Ictidomys_tridecemlineatus
ENSCPBG00000013922	R3HDM2	100	80.690	ENSJJAG00000010001	R3hdm2	100	79.925	Jaculus_jaculus
ENSCPBG00000013922	R3HDM2	96	65.262	ENSKMAG00000012695	r3hdm2	99	65.217	Kryptolebias_marmoratus
ENSCPBG00000013922	R3HDM2	53	38.153	ENSKMAG00000004052	-	78	38.840	Kryptolebias_marmoratus
ENSCPBG00000013922	R3HDM2	56	39.833	ENSLBEG00000002779	-	83	41.711	Labrus_bergylta
ENSCPBG00000013922	R3HDM2	99	62.818	ENSLBEG00000013115	r3hdm2	92	65.341	Labrus_bergylta
ENSCPBG00000013922	R3HDM2	95	70.217	ENSLACG00000019064	r3hdm2	100	70.217	Latimeria_chalumnae
ENSCPBG00000013922	R3HDM2	100	66.416	ENSLOCG00000005976	r3hdm2	100	67.545	Lepisosteus_oculatus
ENSCPBG00000013922	R3HDM2	100	80.000	ENSLAFG00000006510	R3HDM2	100	79.702	Loxodonta_africana
ENSCPBG00000013922	R3HDM2	100	79.795	ENSMFAG00000036385	R3HDM2	100	79.497	Macaca_fascicularis
ENSCPBG00000013922	R3HDM2	100	80.912	ENSMMUG00000021789	R3HDM2	100	80.615	Macaca_mulatta
ENSCPBG00000013922	R3HDM2	100	80.345	ENSMNEG00000025314	R3HDM2	100	80.038	Macaca_nemestrina
ENSCPBG00000013922	R3HDM2	100	80.500	ENSMLEG00000028915	R3HDM2	100	80.192	Mandrillus_leucophaeus
ENSCPBG00000013922	R3HDM2	57	37.724	ENSMAMG00000011755	-	85	40.484	Mastacembelus_armatus
ENSCPBG00000013922	R3HDM2	99	62.343	ENSMAMG00000009793	r3hdm2	95	65.070	Mastacembelus_armatus
ENSCPBG00000013922	R3HDM2	99	62.993	ENSMZEG00005007319	r3hdm2	95	65.851	Maylandia_zebra
ENSCPBG00000013922	R3HDM2	100	80.402	ENSMICG00000012389	R3HDM2	100	80.210	Microcebus_murinus
ENSCPBG00000013922	R3HDM2	100	79.832	ENSMOCG00000014425	R3hdm2	100	79.346	Microtus_ochrogaster
ENSCPBG00000013922	R3HDM2	95	63.030	ENSMMOG00000007448	r3hdm2	99	62.866	Mola_mola
ENSCPBG00000013922	R3HDM2	95	60.142	ENSMALG00000010211	r3hdm2	98	59.574	Monopterus_albus
ENSCPBG00000013922	R3HDM2	100	80.948	MGP_CAROLIEiJ_G0015896	R3hdm2	100	80.019	Mus_caroli
ENSCPBG00000013922	R3HDM2	100	81.023	ENSMUSG00000025404	R3hdm2	100	80.093	Mus_musculus
ENSCPBG00000013922	R3HDM2	100	81.623	MGP_PahariEiJ_G0031189	R3hdm2	100	81.063	Mus_pahari
ENSCPBG00000013922	R3HDM2	100	80.966	MGP_SPRETEiJ_G0016722	R3hdm2	100	80.037	Mus_spretus
ENSCPBG00000013922	R3HDM2	98	79.868	ENSMPUG00000001818	R3HDM2	97	80.038	Mustela_putorius_furo
ENSCPBG00000013922	R3HDM2	100	80.149	ENSMLUG00000004980	R3HDM2	100	79.851	Myotis_lucifugus
ENSCPBG00000013922	R3HDM2	100	80.859	ENSNGAG00000018800	R3hdm2	100	80.374	Nannospalax_galili
ENSCPBG00000013922	R3HDM2	94	61.723	ENSNBRG00000004483	r3hdm2	99	63.137	Neolamprologus_brichardi
ENSCPBG00000013922	R3HDM2	100	80.288	ENSNLEG00000017351	R3HDM2	100	79.981	Nomascus_leucogenys
ENSCPBG00000013922	R3HDM2	99	72.311	ENSMEUG00000008588	R3HDM2	100	72.217	Notamacropus_eugenii
ENSCPBG00000013922	R3HDM2	100	72.640	ENSOPRG00000013670	R3HDM2	100	72.351	Ochotona_princeps
ENSCPBG00000013922	R3HDM2	99	62.689	ENSONIG00000005075	r3hdm2	95	65.548	Oreochromis_niloticus
ENSCPBG00000013922	R3HDM2	100	79.981	ENSOCUG00000013258	R3HDM2	100	79.777	Oryctolagus_cuniculus
ENSCPBG00000013922	R3HDM2	55	34.797	ENSORLG00000011606	-	76	37.794	Oryzias_latipes
ENSCPBG00000013922	R3HDM2	99	62.860	ENSORLG00000005502	r3hdm2	99	63.645	Oryzias_latipes
ENSCPBG00000013922	R3HDM2	99	62.770	ENSORLG00020017069	r3hdm2	99	63.554	Oryzias_latipes_hni
ENSCPBG00000013922	R3HDM2	99	62.860	ENSORLG00015012735	r3hdm2	99	63.645	Oryzias_latipes_hsok
ENSCPBG00000013922	R3HDM2	99	57.895	ENSOMEG00000018079	r3hdm2	94	60.679	Oryzias_melastigma
ENSCPBG00000013922	R3HDM2	52	37.031	ENSOMEG00000009631	-	75	37.950	Oryzias_melastigma
ENSCPBG00000013922	R3HDM2	52	37.031	ENSOMEG00000016256	-	75	37.950	Oryzias_melastigma
ENSCPBG00000013922	R3HDM2	96	69.478	ENSOGAG00000027966	-	99	68.976	Otolemur_garnettii
ENSCPBG00000013922	R3HDM2	100	80.633	ENSOGAG00000012055	R3HDM2	100	80.326	Otolemur_garnettii
ENSCPBG00000013922	R3HDM2	100	79.038	ENSOARG00000006929	R3HDM2	100	78.826	Ovis_aries
ENSCPBG00000013922	R3HDM2	100	80.307	ENSPPAG00000034395	R3HDM2	100	80.000	Pan_paniscus
ENSCPBG00000013922	R3HDM2	100	80.038	ENSPPRG00000009240	R3HDM2	100	80.019	Panthera_pardus
ENSCPBG00000013922	R3HDM2	100	80.038	ENSPTIG00000008752	R3HDM2	100	80.019	Panthera_tigris_altaica
ENSCPBG00000013922	R3HDM2	100	79.609	ENSPTRG00000046457	R3HDM2	100	79.310	Pan_troglodytes
ENSCPBG00000013922	R3HDM2	98	79.081	ENSPANG00000024002	R3HDM2	100	78.669	Papio_anubis
ENSCPBG00000013922	R3HDM2	95	66.569	ENSPKIG00000003171	r3hdm2	96	66.699	Paramormyrops_kingsleyae
ENSCPBG00000013922	R3HDM2	67	74.640	ENSPSIG00000006954	R3HDM2	100	77.139	Pelodiscus_sinensis
ENSCPBG00000013922	R3HDM2	93	64.826	ENSPMGG00000007061	r3hdm2	99	65.066	Periophthalmus_magnuspinnatus
ENSCPBG00000013922	R3HDM2	100	80.187	ENSPEMG00000015964	R3hdm2	100	79.794	Peromyscus_maniculatus_bairdii
ENSCPBG00000013922	R3HDM2	100	79.251	ENSPCIG00000023841	R3HDM2	100	79.038	Phascolarctos_cinereus
ENSCPBG00000013922	R3HDM2	94	54.128	ENSPFOG00000006077	r3hdm2	99	56.947	Poecilia_formosa
ENSCPBG00000013922	R3HDM2	99	62.282	ENSPLAG00000002971	r3hdm2	99	61.462	Poecilia_latipinna
ENSCPBG00000013922	R3HDM2	99	62.282	ENSPMEG00000005330	r3hdm2	99	61.462	Poecilia_mexicana
ENSCPBG00000013922	R3HDM2	99	62.443	ENSPREG00000008424	r3hdm2	95	65.250	Poecilia_reticulata
ENSCPBG00000013922	R3HDM2	98	75.492	ENSPPYG00000004685	R3HDM2	81	74.705	Pongo_abelii
ENSCPBG00000013922	R3HDM2	88	92.058	ENSPCAG00000014642	R3HDM2	94	89.298	Procavia_capensis
ENSCPBG00000013922	R3HDM2	100	80.614	ENSPCOG00000013201	R3HDM2	100	80.403	Propithecus_coquereli
ENSCPBG00000013922	R3HDM2	100	80.392	ENSPVAG00000003967	R3HDM2	100	80.093	Pteropus_vampyrus
ENSCPBG00000013922	R3HDM2	94	61.039	ENSPNYG00000013479	r3hdm2	100	62.351	Pundamilia_nyererei
ENSCPBG00000013922	R3HDM2	99	62.103	ENSPNAG00000017473	r3hdm2	95	64.939	Pygocentrus_nattereri
ENSCPBG00000013922	R3HDM2	100	80.558	ENSRNOG00000007801	R3hdm2	100	79.628	Rattus_norvegicus
ENSCPBG00000013922	R3HDM2	100	78.077	ENSRBIG00000037403	R3HDM2	100	77.478	Rhinopithecus_bieti
ENSCPBG00000013922	R3HDM2	100	81.063	ENSRROG00000022271	R3HDM2	100	80.269	Rhinopithecus_roxellana
ENSCPBG00000013922	R3HDM2	100	80.462	ENSSBOG00000023547	R3HDM2	100	80.154	Saimiri_boliviensis_boliviensis
ENSCPBG00000013922	R3HDM2	100	78.431	ENSSHAG00000003511	R3HDM2	99	80.087	Sarcophilus_harrisii
ENSCPBG00000013922	R3HDM2	94	66.497	ENSSFOG00015011219	r3hdm2	99	66.395	Scleropages_formosus
ENSCPBG00000013922	R3HDM2	99	63.562	ENSSMAG00000012073	r3hdm2	99	63.861	Scophthalmus_maximus
ENSCPBG00000013922	R3HDM2	99	63.419	ENSSDUG00000019269	r3hdm2	100	61.753	Seriola_dumerili
ENSCPBG00000013922	R3HDM2	99	63.382	ENSSLDG00000005252	r3hdm2	100	61.976	Seriola_lalandi_dorsalis
ENSCPBG00000013922	R3HDM2	94	74.431	ENSSARG00000003958	R3HDM2	94	74.431	Sorex_araneus
ENSCPBG00000013922	R3HDM2	100	82.692	ENSSPUG00000014132	R3HDM2	100	82.885	Sphenodon_punctatus
ENSCPBG00000013922	R3HDM2	52	40.171	ENSSPAG00000016856	-	78	40.728	Stegastes_partitus
ENSCPBG00000013922	R3HDM2	99	62.960	ENSSPAG00000022594	r3hdm2	100	62.525	Stegastes_partitus
ENSCPBG00000013922	R3HDM2	100	79.364	ENSSSCG00000026498	R3HDM2	99	80.788	Sus_scrofa
ENSCPBG00000013922	R3HDM2	76	79.188	ENSTGUG00000015881	R3HDM2	100	80.076	Taeniopygia_guttata
ENSCPBG00000013922	R3HDM2	95	60.537	ENSTRUG00000015075	r3hdm2	99	61.730	Takifugu_rubripes
ENSCPBG00000013922	R3HDM2	91	82.081	ENSTNIG00000007057	r3hdm2	91	82.081	Tetraodon_nigroviridis
ENSCPBG00000013922	R3HDM2	79	83.333	ENSTBEG00000015967	R3HDM2	81	83.333	Tupaia_belangeri
ENSCPBG00000013922	R3HDM2	89	84.368	ENSTTRG00000013082	R3HDM2	95	81.818	Tursiops_truncatus
ENSCPBG00000013922	R3HDM2	100	80.208	ENSUAMG00000020913	R3HDM2	100	80.284	Ursus_americanus
ENSCPBG00000013922	R3HDM2	100	75.510	ENSUMAG00000019179	R3HDM2	100	75.836	Ursus_maritimus
ENSCPBG00000013922	R3HDM2	95	90.057	ENSVPAG00000008656	R3HDM2	94	90.057	Vicugna_pacos
ENSCPBG00000013922	R3HDM2	98	80.685	ENSVVUG00000018014	R3HDM2	97	80.212	Vulpes_vulpes
ENSCPBG00000013922	R3HDM2	100	71.058	ENSXETG00000017153	r3hdm2	100	71.191	Xenopus_tropicalis
ENSCPBG00000013922	R3HDM2	87	59.144	ENSXCOG00000013882	r3hdm2	100	61.194	Xiphophorus_couchianus
ENSCPBG00000013922	R3HDM2	99	62.240	ENSXMAG00000017978	r3hdm2	100	61.194	Xiphophorus_maculatus