EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000013964 (Gene tree)
Gene ID: 101948267
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 36246 bases
Position: chrKK083152.1:261814-298059
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019307	PRP1_N	PF06424.12	1.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000022740	PRPF6-201	5168	-	ENSCPBP00000019307	977 (aa)	XP_005309929	UPI000388C749

Gene Model

Click here to download ENSCPBG00000013964's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000013964's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000013964	PRPF6	96	97.237	ENSG00000101161	PRPF6	100	97.237	Homo_sapiens
ENSCPBG00000013964	PRPF6	96	92.979	ENSAPOG00000010395	prpf6	98	91.988	Acanthochromis_polyacanthus
ENSCPBG00000013964	PRPF6	97	96.934	ENSAMEG00000001916	PRPF6	99	96.934	Ailuropoda_melanoleuca
ENSCPBG00000013964	PRPF6	96	92.872	ENSACIG00000019862	prpf6	98	91.779	Amphilophus_citrinellus
ENSCPBG00000013964	PRPF6	96	93.085	ENSAOCG00000012988	prpf6	98	92.092	Amphiprion_ocellaris
ENSCPBG00000013964	PRPF6	96	86.383	ENSAPEG00000008301	prpf6	100	86.915	Amphiprion_percula
ENSCPBG00000013964	PRPF6	96	92.553	ENSATEG00000005581	prpf6	98	91.467	Anabas_testudineus
ENSCPBG00000013964	PRPF6	100	96.457	ENSACAG00000006464	PRPF6	100	96.457	Anolis_carolinensis
ENSCPBG00000013964	PRPF6	96	97.343	ENSANAG00000012661	PRPF6	100	98.233	Aotus_nancymaae
ENSCPBG00000013964	PRPF6	96	92.766	ENSACLG00000025875	prpf6	98	91.675	Astatotilapia_calliptera
ENSCPBG00000013964	PRPF6	97	92.797	ENSAMXG00000001929	prpf6	98	92.012	Astyanax_mexicanus
ENSCPBG00000013964	PRPF6	96	97.875	ENSBTAG00000011656	PRPF6	100	97.875	Bos_taurus
ENSCPBG00000013964	PRPF6	96	97.343	ENSCJAG00000010616	PRPF6	100	97.343	Callithrix_jacchus
ENSCPBG00000013964	PRPF6	96	98.087	ENSCAFG00000013165	PRPF6	100	98.087	Canis_familiaris
ENSCPBG00000013964	PRPF6	96	98.087	ENSCAFG00020002050	PRPF6	100	98.087	Canis_lupus_dingo
ENSCPBG00000013964	PRPF6	96	97.875	ENSCHIG00000018187	PRPF6	100	97.875	Capra_hircus
ENSCPBG00000013964	PRPF6	96	97.981	ENSTSYG00000007814	PRPF6	100	97.981	Carlito_syrichta
ENSCPBG00000013964	PRPF6	94	97.056	ENSCAPG00000015077	PRPF6	100	97.056	Cavia_aperea
ENSCPBG00000013964	PRPF6	96	98.406	ENSCPOG00000007518	PRPF6	100	98.406	Cavia_porcellus
ENSCPBG00000013964	PRPF6	96	93.943	ENSCCAG00000024564	PRPF6	100	93.518	Cebus_capucinus
ENSCPBG00000013964	PRPF6	96	97.343	ENSCATG00000037473	PRPF6	100	97.343	Cercocebus_atys
ENSCPBG00000013964	PRPF6	96	94.580	ENSCLAG00000003854	PRPF6	100	94.580	Chinchilla_lanigera
ENSCPBG00000013964	PRPF6	96	92.080	ENSCSAG00000016742	PRPF6	100	91.658	Chlorocebus_sabaeus
ENSCPBG00000013964	PRPF6	81	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSCPBG00000013964	PRPF6	97	73.640	ENSCING00000008817	-	99	73.640	Ciona_intestinalis
ENSCPBG00000013964	PRPF6	96	97.131	ENSCANG00000038230	PRPF6	100	97.131	Colobus_angolensis_palliatus
ENSCPBG00000013964	PRPF6	96	98.193	ENSCGRG00001022666	Prpf6	100	98.193	Cricetulus_griseus_chok1gshd
ENSCPBG00000013964	PRPF6	96	87.553	ENSCSEG00000018561	prpf6	100	87.979	Cynoglossus_semilaevis
ENSCPBG00000013964	PRPF6	96	92.766	ENSCVAG00000010550	prpf6	98	91.883	Cyprinodon_variegatus
ENSCPBG00000013964	PRPF6	97	92.511	ENSDARG00000091367	prpf6	99	92.932	Danio_rerio
ENSCPBG00000013964	PRPF6	96	97.556	ENSDNOG00000040544	PRPF6	100	97.556	Dasypus_novemcinctus
ENSCPBG00000013964	PRPF6	88	97.664	ENSDORG00000005406	Prpf6	100	97.664	Dipodomys_ordii
ENSCPBG00000013964	PRPF6	97	71.882	FBgn0036828	CG6841	99	71.882	Drosophila_melanogaster
ENSCPBG00000013964	PRPF6	82	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSCPBG00000013964	PRPF6	97	86.597	ENSEBUG00000008835	prpf6	99	87.275	Eptatretus_burgeri
ENSCPBG00000013964	PRPF6	99	96.058	ENSEASG00005023115	PRPF6	100	97.875	Equus_asinus_asinus
ENSCPBG00000013964	PRPF6	96	93.624	ENSECAG00000013983	PRPF6	100	93.624	Equus_caballus
ENSCPBG00000013964	PRPF6	86	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSCPBG00000013964	PRPF6	96	91.702	ENSELUG00000001945	prpf6	97	88.866	Esox_lucius
ENSCPBG00000013964	PRPF6	96	98.193	ENSFCAG00000001183	PRPF6	100	98.193	Felis_catus
ENSCPBG00000013964	PRPF6	98	96.698	ENSFALG00000010326	-	100	96.698	Ficedula_albicollis
ENSCPBG00000013964	PRPF6	99	89.278	ENSFALG00000006046	-	99	90.000	Ficedula_albicollis
ENSCPBG00000013964	PRPF6	96	96.918	ENSFDAG00000006451	PRPF6	100	98.299	Fukomys_damarensis
ENSCPBG00000013964	PRPF6	96	93.617	ENSFHEG00000000560	prpf6	98	92.196	Fundulus_heteroclitus
ENSCPBG00000013964	PRPF6	96	89.630	ENSGMOG00000015622	prpf6	99	89.630	Gadus_morhua
ENSCPBG00000013964	PRPF6	96	98.512	ENSGALG00000006001	PRPF6	100	98.512	Gallus_gallus
ENSCPBG00000013964	PRPF6	96	88.298	ENSGAFG00000021109	prpf6	98	87.201	Gambusia_affinis
ENSCPBG00000013964	PRPF6	96	91.702	ENSGACG00000002576	prpf6	99	91.702	Gasterosteus_aculeatus
ENSCPBG00000013964	PRPF6	100	99.795	ENSGAGG00000008653	PRPF6	100	99.795	Gopherus_agassizii
ENSCPBG00000013964	PRPF6	96	97.237	ENSGGOG00000016876	PRPF6	100	97.237	Gorilla_gorilla
ENSCPBG00000013964	PRPF6	96	92.766	ENSHBUG00000004496	prpf6	98	91.675	Haplochromis_burtoni
ENSCPBG00000013964	PRPF6	96	98.300	ENSHGLG00000009222	PRPF6	100	98.300	Heterocephalus_glaber_female
ENSCPBG00000013964	PRPF6	94	98.255	ENSHGLG00100016600	PRPF6	100	98.255	Heterocephalus_glaber_male
ENSCPBG00000013964	PRPF6	96	91.809	ENSHCOG00000011513	prpf6	98	90.644	Hippocampus_comes
ENSCPBG00000013964	PRPF6	99	91.847	ENSIPUG00000004912	prpf6	98	92.316	Ictalurus_punctatus
ENSCPBG00000013964	PRPF6	96	95.541	ENSSTOG00000002922	PRPF6	100	95.541	Ictidomys_tridecemlineatus
ENSCPBG00000013964	PRPF6	96	98.406	ENSJJAG00000000836	Prpf6	100	98.406	Jaculus_jaculus
ENSCPBG00000013964	PRPF6	96	92.553	ENSKMAG00000017800	prpf6	98	91.571	Kryptolebias_marmoratus
ENSCPBG00000013964	PRPF6	96	92.234	ENSLBEG00000012582	prpf6	98	90.843	Labrus_bergylta
ENSCPBG00000013964	PRPF6	97	94.953	ENSLOCG00000004827	prpf6	97	94.381	Lepisosteus_oculatus
ENSCPBG00000013964	PRPF6	96	97.343	ENSLAFG00000005272	PRPF6	100	97.343	Loxodonta_africana
ENSCPBG00000013964	PRPF6	96	97.131	ENSMFAG00000037542	PRPF6	100	97.131	Macaca_fascicularis
ENSCPBG00000013964	PRPF6	96	90.552	ENSMMUG00000015558	PRPF6	98	99.133	Macaca_mulatta
ENSCPBG00000013964	PRPF6	96	82.733	ENSMNEG00000045555	PRPF6	100	82.309	Macaca_nemestrina
ENSCPBG00000013964	PRPF6	96	92.872	ENSMAMG00000010718	prpf6	98	91.675	Mastacembelus_armatus
ENSCPBG00000013964	PRPF6	90	92.281	ENSMZEG00005026539	prpf6	100	92.736	Maylandia_zebra
ENSCPBG00000013964	PRPF6	96	92.242	ENSMZEG00005015261	-	99	92.667	Maylandia_zebra
ENSCPBG00000013964	PRPF6	94	98.691	ENSMGAG00000006634	PRPF6	100	98.691	Meleagris_gallopavo
ENSCPBG00000013964	PRPF6	96	98.193	ENSMAUG00000013969	Prpf6	100	98.193	Mesocricetus_auratus
ENSCPBG00000013964	PRPF6	84	97.202	ENSMICG00000017793	PRPF6	99	97.202	Microcebus_murinus
ENSCPBG00000013964	PRPF6	96	98.193	ENSMOCG00000001701	Prpf6	100	98.193	Microtus_ochrogaster
ENSCPBG00000013964	PRPF6	96	92.340	ENSMMOG00000020419	prpf6	100	92.766	Mola_mola
ENSCPBG00000013964	PRPF6	95	99.137	ENSMODG00000017051	PRPF6	99	99.137	Monodelphis_domestica
ENSCPBG00000013964	PRPF6	95	93.011	ENSMALG00000000089	prpf6	100	93.011	Monopterus_albus
ENSCPBG00000013964	PRPF6	96	91.605	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSCPBG00000013964	PRPF6	96	98.193	ENSMUSG00000002455	Prpf6	100	98.193	Mus_musculus
ENSCPBG00000013964	PRPF6	96	98.193	MGP_PahariEiJ_G0026262	Prpf6	100	98.193	Mus_pahari
ENSCPBG00000013964	PRPF6	96	98.193	MGP_SPRETEiJ_G0025741	Prpf6	100	98.193	Mus_spretus
ENSCPBG00000013964	PRPF6	87	98.208	ENSMPUG00000008673	PRPF6	99	98.208	Mustela_putorius_furo
ENSCPBG00000013964	PRPF6	96	98.406	ENSNGAG00000003365	Prpf6	100	98.406	Nannospalax_galili
ENSCPBG00000013964	PRPF6	96	92.872	ENSNBRG00000015025	prpf6	98	91.779	Neolamprologus_brichardi
ENSCPBG00000013964	PRPF6	96	97.131	ENSNLEG00000010208	PRPF6	100	97.131	Nomascus_leucogenys
ENSCPBG00000013964	PRPF6	96	90.316	ENSMEUG00000009824	-	90	90.316	Notamacropus_eugenii
ENSCPBG00000013964	PRPF6	96	92.242	ENSODEG00000004841	PRPF6	100	91.817	Octodon_degus
ENSCPBG00000013964	PRPF6	96	92.766	ENSONIG00000017406	prpf6	98	91.675	Oreochromis_niloticus
ENSCPBG00000013964	PRPF6	96	99.362	ENSOANG00000004920	PRPF6	100	99.362	Ornithorhynchus_anatinus
ENSCPBG00000013964	PRPF6	95	96.352	ENSOCUG00000014151	PRPF6	100	96.352	Oryctolagus_cuniculus
ENSCPBG00000013964	PRPF6	96	92.660	ENSORLG00000009592	prpf6	98	90.947	Oryzias_latipes
ENSCPBG00000013964	PRPF6	96	92.766	ENSORLG00020001458	prpf6	98	91.051	Oryzias_latipes_hni
ENSCPBG00000013964	PRPF6	96	92.766	ENSORLG00015018762	prpf6	98	91.051	Oryzias_latipes_hsok
ENSCPBG00000013964	PRPF6	96	92.340	ENSOMEG00000012174	prpf6	98	91.259	Oryzias_melastigma
ENSCPBG00000013964	PRPF6	96	90.340	ENSOGAG00000007573	PRPF6	100	89.703	Otolemur_garnettii
ENSCPBG00000013964	PRPF6	97	97.249	ENSOARG00000008776	PRPF6	99	97.249	Ovis_aries
ENSCPBG00000013964	PRPF6	96	97.237	ENSPPAG00000008686	PRPF6	100	97.237	Pan_paniscus
ENSCPBG00000013964	PRPF6	96	98.087	ENSPPRG00000008497	PRPF6	100	98.087	Panthera_pardus
ENSCPBG00000013964	PRPF6	94	98.037	ENSPTIG00000011184	PRPF6	97	98.037	Panthera_tigris_altaica
ENSCPBG00000013964	PRPF6	96	97.237	ENSPTRG00000013765	PRPF6	100	97.237	Pan_troglodytes
ENSCPBG00000013964	PRPF6	96	97.131	ENSPANG00000024135	PRPF6	100	97.131	Papio_anubis
ENSCPBG00000013964	PRPF6	98	93.933	ENSPKIG00000005627	prpf6	99	93.933	Paramormyrops_kingsleyae
ENSCPBG00000013964	PRPF6	90	99.773	ENSPSIG00000007717	PRPF6	100	99.773	Pelodiscus_sinensis
ENSCPBG00000013964	PRPF6	99	87.807	ENSPMGG00000008925	prpf6	98	88.877	Periophthalmus_magnuspinnatus
ENSCPBG00000013964	PRPF6	96	98.087	ENSPEMG00000016036	Prpf6	100	98.087	Peromyscus_maniculatus_bairdii
ENSCPBG00000013964	PRPF6	97	87.618	ENSPMAG00000006144	prpf6	99	87.618	Petromyzon_marinus
ENSCPBG00000013964	PRPF6	96	99.256	ENSPCIG00000017909	PRPF6	100	99.256	Phascolarctos_cinereus
ENSCPBG00000013964	PRPF6	96	93.085	ENSPFOG00000006431	prpf6	98	91.988	Poecilia_formosa
ENSCPBG00000013964	PRPF6	96	92.979	ENSPLAG00000005974	prpf6	98	91.883	Poecilia_latipinna
ENSCPBG00000013964	PRPF6	96	93.191	ENSPMEG00000009977	prpf6	98	91.988	Poecilia_mexicana
ENSCPBG00000013964	PRPF6	96	93.085	ENSPREG00000017993	prpf6	94	91.883	Poecilia_reticulata
ENSCPBG00000013964	PRPF6	96	96.706	ENSPPYG00000011256	PRPF6	100	96.706	Pongo_abelii
ENSCPBG00000013964	PRPF6	91	99.510	ENSPCAG00000006536	PRPF6	88	99.510	Procavia_capensis
ENSCPBG00000013964	PRPF6	96	97.237	ENSPCOG00000016881	PRPF6	100	97.237	Propithecus_coquereli
ENSCPBG00000013964	PRPF6	96	91.392	ENSPVAG00000014316	PRPF6	100	90.967	Pteropus_vampyrus
ENSCPBG00000013964	PRPF6	96	76.302	ENSPNYG00000001939	prpf6	98	89.888	Pundamilia_nyererei
ENSCPBG00000013964	PRPF6	97	92.932	ENSPNAG00000015606	prpf6	98	92.716	Pygocentrus_nattereri
ENSCPBG00000013964	PRPF6	96	98.087	ENSRNOG00000051498	Prpf6	100	98.087	Rattus_norvegicus
ENSCPBG00000013964	PRPF6	96	97.131	ENSRBIG00000043613	PRPF6	100	97.131	Rhinopithecus_bieti
ENSCPBG00000013964	PRPF6	96	93.862	ENSRROG00000040969	PRPF6	98	97.751	Rhinopithecus_roxellana
ENSCPBG00000013964	PRPF6	87	93.253	ENSSBOG00000020632	PRPF6	93	93.253	Saimiri_boliviensis_boliviensis
ENSCPBG00000013964	PRPF6	96	99.256	ENSSHAG00000016810	PRPF6	100	99.256	Sarcophilus_harrisii
ENSCPBG00000013964	PRPF6	95	95.054	ENSSFOG00015020859	prpf6	100	95.054	Scleropages_formosus
ENSCPBG00000013964	PRPF6	96	92.021	ENSSMAG00000008112	prpf6	98	90.531	Scophthalmus_maximus
ENSCPBG00000013964	PRPF6	96	92.660	ENSSDUG00000016142	prpf6	98	91.571	Seriola_dumerili
ENSCPBG00000013964	PRPF6	96	92.660	ENSSLDG00000025283	prpf6	100	89.574	Seriola_lalandi_dorsalis
ENSCPBG00000013964	PRPF6	90	97.279	ENSSPUG00000018260	PRPF6	100	97.279	Sphenodon_punctatus
ENSCPBG00000013964	PRPF6	96	92.766	ENSSPAG00000015850	prpf6	98	91.675	Stegastes_partitus
ENSCPBG00000013964	PRPF6	98	96.555	ENSSSCG00000029119	PRPF6	100	97.506	Sus_scrofa
ENSCPBG00000013964	PRPF6	97	98.729	ENSTGUG00000007221	PRPF6	100	98.729	Taeniopygia_guttata
ENSCPBG00000013964	PRPF6	96	92.021	ENSTRUG00000002920	prpf6	98	91.051	Takifugu_rubripes
ENSCPBG00000013964	PRPF6	96	85.714	ENSTNIG00000017873	prpf6	100	86.138	Tetraodon_nigroviridis
ENSCPBG00000013964	PRPF6	85	98.343	ENSTBEG00000005348	PRPF6	85	96.133	Tupaia_belangeri
ENSCPBG00000013964	PRPF6	96	97.450	ENSTTRG00000013068	PRPF6	100	97.450	Tursiops_truncatus
ENSCPBG00000013964	PRPF6	98	92.872	ENSUMAG00000021631	PRPF6	98	96.522	Ursus_maritimus
ENSCPBG00000013964	PRPF6	96	98.087	ENSVVUG00000014948	PRPF6	100	98.087	Vulpes_vulpes
ENSCPBG00000013964	PRPF6	98	96.226	ENSXETG00000012054	prpf6	99	95.639	Xenopus_tropicalis
ENSCPBG00000013964	PRPF6	96	93.191	ENSXCOG00000008082	prpf6	98	91.988	Xiphophorus_couchianus
ENSCPBG00000013964	PRPF6	96	93.191	ENSXMAG00000015581	prpf6	98	92.092	Xiphophorus_maculatus