EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000014029 (Gene tree)
Gene ID: 101938970
Gene Symbol: PAN2
Alias: KIAA0710|USP52|hPAN2
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 21481 bases
Position: chrKK083195.1:621862-643342
Accession: 20074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019410	RNase_T	PF00929.24	1.7e-19	1	1
ENSCPBP00000019413	RNase_T	PF00929.24	1.7e-19	1	1
ENSCPBP00000019417	RNase_T	PF00929.24	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000022855	PAN2-201	4898	XM_024111747	ENSCPBP00000019410	1195 (aa)	XP_008173475	UPI00046C1839
ENSCPBT00000022862	PAN2-203	4711	-	ENSCPBP00000019417	1119 (aa)	-	-
ENSCPBT00000022858	PAN2-202	4722	XM_024111747	ENSCPBP00000019413	1195 (aa)	XP_008173475	UPI00046C1839

Gene Model

Click here to download ENSCPBG00000014029's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014029	PAN2	100	77.759	ENSAPOG00000022955	pan2	99	77.842	Acanthochromis_polyacanthus
ENSCPBG00000014029	PAN2	100	85.952	ENSAMEG00000003824	PAN2	100	85.786	Ailuropoda_melanoleuca
ENSCPBG00000014029	PAN2	99	76.773	ENSACIG00000013079	pan2	99	76.769	Amphilophus_citrinellus
ENSCPBG00000014029	PAN2	100	63.055	ENSACIG00000012858	PAN2	99	61.648	Amphilophus_citrinellus
ENSCPBG00000014029	PAN2	100	77.044	ENSAOCG00000022334	pan2	99	77.126	Amphiprion_ocellaris
ENSCPBG00000014029	PAN2	100	77.100	ENSAPEG00000022760	pan2	99	77.183	Amphiprion_percula
ENSCPBG00000014029	PAN2	99	77.224	ENSATEG00000024030	pan2	100	77.288	Anabas_testudineus
ENSCPBG00000014029	PAN2	99	93.482	ENSAPLG00000005195	PAN2	100	93.571	Anas_platyrhynchos
ENSCPBG00000014029	PAN2	100	92.809	ENSACAG00000007067	PAN2	100	92.726	Anolis_carolinensis
ENSCPBG00000014029	PAN2	100	85.762	ENSANAG00000036468	PAN2	99	87.234	Aotus_nancymaae
ENSCPBG00000014029	PAN2	100	77.393	ENSACLG00000023674	pan2	99	77.475	Astatotilapia_calliptera
ENSCPBG00000014029	PAN2	99	61.815	ENSACLG00000023821	pan2	99	61.088	Astatotilapia_calliptera
ENSCPBG00000014029	PAN2	99	76.923	ENSAMXG00000005418	pan2	98	76.769	Astyanax_mexicanus
ENSCPBG00000014029	PAN2	100	86.178	ENSBTAG00000004376	PAN2	100	86.012	Bos_taurus
ENSCPBG00000014029	PAN2	100	85.786	ENSCJAG00000011141	PAN2	100	85.619	Callithrix_jacchus
ENSCPBG00000014029	PAN2	100	85.845	ENSCAFG00000000119	PAN2	100	86.667	Canis_familiaris
ENSCPBG00000014029	PAN2	100	84.843	ENSCAFG00020024865	PAN2	100	84.843	Canis_lupus_dingo
ENSCPBG00000014029	PAN2	100	85.029	ENSCHIG00000026935	PAN2	100	85.029	Capra_hircus
ENSCPBG00000014029	PAN2	100	85.443	ENSTSYG00000006927	PAN2	99	87.500	Carlito_syrichta
ENSCPBG00000014029	PAN2	100	85.501	ENSCPOG00000014918	PAN2	100	85.501	Cavia_porcellus
ENSCPBG00000014029	PAN2	100	85.869	ENSCCAG00000036637	PAN2	99	87.500	Cebus_capucinus
ENSCPBG00000014029	PAN2	100	86.178	ENSCATG00000045076	PAN2	99	87.968	Cercocebus_atys
ENSCPBG00000014029	PAN2	100	85.336	ENSCLAG00000011700	PAN2	100	85.336	Chinchilla_lanigera
ENSCPBG00000014029	PAN2	100	86.035	ENSCSAG00000005173	PAN2	100	85.869	Chlorocebus_sabaeus
ENSCPBG00000014029	PAN2	91	46.924	ENSCSAVG00000003833	-	99	55.970	Ciona_savignyi
ENSCPBG00000014029	PAN2	100	84.136	ENSCANG00000017798	PAN2	100	83.970	Colobus_angolensis_palliatus
ENSCPBG00000014029	PAN2	100	85.762	ENSCGRG00001019707	Pan2	100	85.595	Cricetulus_griseus_chok1gshd
ENSCPBG00000014029	PAN2	100	84.864	ENSCGRG00000009996	Pan2	100	84.864	Cricetulus_griseus_crigri
ENSCPBG00000014029	PAN2	100	73.223	ENSCSEG00000021529	pan2	99	73.493	Cynoglossus_semilaevis
ENSCPBG00000014029	PAN2	100	77.126	ENSCVAG00000010197	pan2	100	76.821	Cyprinodon_variegatus
ENSCPBG00000014029	PAN2	100	75.931	ENSDARG00000074675	pan2	99	76.013	Danio_rerio
ENSCPBG00000014029	PAN2	100	86.155	ENSDNOG00000010940	PAN2	100	85.988	Dasypus_novemcinctus
ENSCPBG00000014029	PAN2	95	42.440	FBgn0033352	PAN2	96	42.669	Drosophila_melanogaster
ENSCPBG00000014029	PAN2	75	90.395	ENSETEG00000012041	PAN2	82	90.395	Echinops_telfairi
ENSCPBG00000014029	PAN2	99	58.940	ENSEBUG00000002773	pan2	98	58.898	Eptatretus_burgeri
ENSCPBG00000014029	PAN2	100	85.467	ENSEASG00005005235	PAN2	100	85.301	Equus_asinus_asinus
ENSCPBG00000014029	PAN2	100	86.178	ENSECAG00000019814	PAN2	100	86.012	Equus_caballus
ENSCPBG00000014029	PAN2	99	77.004	ENSELUG00000024604	pan2	99	76.758	Esox_lucius
ENSCPBG00000014029	PAN2	100	85.786	ENSFCAG00000012021	PAN2	100	85.619	Felis_catus
ENSCPBG00000014029	PAN2	99	92.225	ENSFALG00000000464	PAN2	99	91.611	Ficedula_albicollis
ENSCPBG00000014029	PAN2	100	85.277	ENSFDAG00000017104	PAN2	100	85.277	Fukomys_damarensis
ENSCPBG00000014029	PAN2	92	73.768	ENSFHEG00000000157	pan2	96	74.245	Fundulus_heteroclitus
ENSCPBG00000014029	PAN2	100	74.587	ENSGMOG00000007249	pan2	99	75.021	Gadus_morhua
ENSCPBG00000014029	PAN2	100	93.317	ENSGALG00000031512	PAN2	100	93.233	Gallus_gallus
ENSCPBG00000014029	PAN2	100	77.126	ENSGAFG00000000284	pan2	100	77.261	Gambusia_affinis
ENSCPBG00000014029	PAN2	100	75.495	ENSGACG00000010722	pan2	99	76.132	Gasterosteus_aculeatus
ENSCPBG00000014029	PAN2	100	98.661	ENSGAGG00000007868	PAN2	100	98.661	Gopherus_agassizii
ENSCPBG00000014029	PAN2	100	85.702	ENSGGOG00000009115	PAN2	99	87.701	Gorilla_gorilla
ENSCPBG00000014029	PAN2	100	77.419	ENSHBUG00000005234	pan2	99	77.556	Haplochromis_burtoni
ENSCPBG00000014029	PAN2	99	84.821	ENSHGLG00000005647	PAN2	99	84.821	Heterocephalus_glaber_female
ENSCPBG00000014029	PAN2	99	84.570	ENSHGLG00100014057	PAN2	99	84.570	Heterocephalus_glaber_male
ENSCPBG00000014029	PAN2	100	76.853	ENSHCOG00000007920	pan2	99	76.936	Hippocampus_comes
ENSCPBG00000014029	PAN2	100	78.257	ENSIPUG00000011065	PAN2	99	78.257	Ictalurus_punctatus
ENSCPBG00000014029	PAN2	94	86.076	ENSSTOG00000015974	PAN2	100	86.076	Ictidomys_tridecemlineatus
ENSCPBG00000014029	PAN2	99	85.537	ENSJJAG00000013044	Pan2	98	85.321	Jaculus_jaculus
ENSCPBG00000014029	PAN2	100	76.879	ENSKMAG00000006192	pan2	99	76.961	Kryptolebias_marmoratus
ENSCPBG00000014029	PAN2	99	73.801	ENSLBEG00000015763	pan2	99	73.645	Labrus_bergylta
ENSCPBG00000014029	PAN2	100	76.356	ENSLACG00000018694	PAN2	100	76.437	Latimeria_chalumnae
ENSCPBG00000014029	PAN2	100	79.868	ENSLOCG00000004333	pan2	99	80.033	Lepisosteus_oculatus
ENSCPBG00000014029	PAN2	100	84.176	ENSLAFG00000014873	PAN2	100	84.176	Loxodonta_africana
ENSCPBG00000014029	PAN2	100	86.095	ENSMFAG00000002293	PAN2	99	87.968	Macaca_fascicularis
ENSCPBG00000014029	PAN2	100	86.095	ENSMMUG00000013482	PAN2	100	85.928	Macaca_mulatta
ENSCPBG00000014029	PAN2	100	86.178	ENSMNEG00000033264	PAN2	99	87.701	Macaca_nemestrina
ENSCPBG00000014029	PAN2	100	86.261	ENSMLEG00000037388	PAN2	99	87.968	Mandrillus_leucophaeus
ENSCPBG00000014029	PAN2	100	77.374	ENSMAMG00000001624	pan2	100	77.457	Mastacembelus_armatus
ENSCPBG00000014029	PAN2	100	77.393	ENSMZEG00005026462	pan2	99	77.475	Maylandia_zebra
ENSCPBG00000014029	PAN2	98	63.124	ENSMZEG00005026472	pan2	98	61.937	Maylandia_zebra
ENSCPBG00000014029	PAN2	99	93.750	ENSMGAG00000001439	PAN2	100	93.512	Meleagris_gallopavo
ENSCPBG00000014029	PAN2	99	85.392	ENSMAUG00000012602	Pan2	99	85.392	Mesocricetus_auratus
ENSCPBG00000014029	PAN2	100	86.178	ENSMICG00000017661	PAN2	100	86.012	Microcebus_murinus
ENSCPBG00000014029	PAN2	100	84.833	ENSMOCG00000007191	Pan2	100	84.667	Microtus_ochrogaster
ENSCPBG00000014029	PAN2	99	77.107	ENSMMOG00000009313	pan2	97	77.193	Mola_mola
ENSCPBG00000014029	PAN2	100	77.595	ENSMALG00000013377	pan2	100	77.759	Monopterus_albus
ENSCPBG00000014029	PAN2	100	84.838	MGP_CAROLIEiJ_G0015930	Pan2	100	84.838	Mus_caroli
ENSCPBG00000014029	PAN2	100	85.392	ENSMUSG00000005682	Pan2	100	85.392	Mus_musculus
ENSCPBG00000014029	PAN2	100	84.838	MGP_PahariEiJ_G0031154	Pan2	100	84.838	Mus_pahari
ENSCPBG00000014029	PAN2	100	85.321	MGP_SPRETEiJ_G0016755	Pan2	100	85.309	Mus_spretus
ENSCPBG00000014029	PAN2	100	86.178	ENSMPUG00000001383	PAN2	100	86.012	Mustela_putorius_furo
ENSCPBG00000014029	PAN2	100	85.179	ENSMLUG00000006737	PAN2	100	85.096	Myotis_lucifugus
ENSCPBG00000014029	PAN2	100	85.786	ENSNGAG00000007930	Pan2	100	85.786	Nannospalax_galili
ENSCPBG00000014029	PAN2	90	94.286	ENSNBRG00000006585	pan2	89	94.286	Neolamprologus_brichardi
ENSCPBG00000014029	PAN2	100	80.282	ENSNLEG00000017499	PAN2	99	87.433	Nomascus_leucogenys
ENSCPBG00000014029	PAN2	100	88.103	ENSMEUG00000010125	PAN2	100	87.937	Notamacropus_eugenii
ENSCPBG00000014029	PAN2	100	84.660	ENSOPRG00000001468	PAN2	100	84.494	Ochotona_princeps
ENSCPBG00000014029	PAN2	100	84.793	ENSODEG00000007203	PAN2	100	84.793	Octodon_degus
ENSCPBG00000014029	PAN2	100	75.980	ENSONIG00000016732	pan2	100	76.062	Oreochromis_niloticus
ENSCPBG00000014029	PAN2	82	73.127	ENSOANG00000005151	PAN2	99	73.327	Ornithorhynchus_anatinus
ENSCPBG00000014029	PAN2	100	84.768	ENSOCUG00000007227	PAN2	100	84.768	Oryctolagus_cuniculus
ENSCPBG00000014029	PAN2	100	76.403	ENSORLG00000015195	pan2	100	76.568	Oryzias_latipes
ENSCPBG00000014029	PAN2	100	76.403	ENSORLG00020000277	pan2	100	76.568	Oryzias_latipes_hni
ENSCPBG00000014029	PAN2	100	76.403	ENSORLG00015005193	pan2	100	76.568	Oryzias_latipes_hsok
ENSCPBG00000014029	PAN2	100	76.815	ENSOMEG00000022087	pan2	100	76.980	Oryzias_melastigma
ENSCPBG00000014029	PAN2	100	85.207	ENSOGAG00000030620	PAN2	100	85.207	Otolemur_garnettii
ENSCPBG00000014029	PAN2	100	85.869	ENSOARG00000009379	PAN2	100	85.702	Ovis_aries
ENSCPBG00000014029	PAN2	100	85.928	ENSPPAG00000001208	PAN2	99	87.968	Pan_paniscus
ENSCPBG00000014029	PAN2	100	85.869	ENSPPRG00000021586	PAN2	100	85.702	Panthera_pardus
ENSCPBG00000014029	PAN2	100	82.645	ENSPTIG00000012494	PAN2	100	82.479	Panthera_tigris_altaica
ENSCPBG00000014029	PAN2	100	85.928	ENSPTRG00000052054	PAN2	99	87.968	Pan_troglodytes
ENSCPBG00000014029	PAN2	92	86.204	ENSPANG00000018906	PAN2	99	87.968	Papio_anubis
ENSCPBG00000014029	PAN2	100	77.521	ENSPKIG00000003973	pan2	99	77.355	Paramormyrops_kingsleyae
ENSCPBG00000014029	PAN2	100	93.144	ENSPSIG00000003267	PAN2	100	93.227	Pelodiscus_sinensis
ENSCPBG00000014029	PAN2	100	76.827	ENSPMGG00000023186	pan2	100	76.827	Periophthalmus_magnuspinnatus
ENSCPBG00000014029	PAN2	100	84.533	ENSPEMG00000018505	Pan2	100	84.533	Peromyscus_maniculatus_bairdii
ENSCPBG00000014029	PAN2	92	69.402	ENSPMAG00000004731	pan2	100	69.653	Petromyzon_marinus
ENSCPBG00000014029	PAN2	100	88.657	ENSPCIG00000024643	PAN2	100	88.657	Phascolarctos_cinereus
ENSCPBG00000014029	PAN2	100	76.879	ENSPFOG00000008392	pan2	99	77.044	Poecilia_formosa
ENSCPBG00000014029	PAN2	100	76.879	ENSPLAG00000009198	pan2	99	77.044	Poecilia_latipinna
ENSCPBG00000014029	PAN2	100	76.961	ENSPMEG00000001484	pan2	100	76.955	Poecilia_mexicana
ENSCPBG00000014029	PAN2	100	76.879	ENSPREG00000000900	pan2	100	76.846	Poecilia_reticulata
ENSCPBG00000014029	PAN2	89	87.869	ENSPPYG00000004656	PAN2	100	88.088	Pongo_abelii
ENSCPBG00000014029	PAN2	92	85.805	ENSPCAG00000011047	PAN2	99	85.624	Procavia_capensis
ENSCPBG00000014029	PAN2	100	86.012	ENSPCOG00000018263	PAN2	100	86.095	Propithecus_coquereli
ENSCPBG00000014029	PAN2	94	86.667	ENSPVAG00000007591	PAN2	94	86.667	Pteropus_vampyrus
ENSCPBG00000014029	PAN2	99	77.660	ENSPNYG00000002629	pan2	99	77.473	Pundamilia_nyererei
ENSCPBG00000014029	PAN2	100	78.524	ENSPNAG00000027140	pan2	99	78.607	Pygocentrus_nattereri
ENSCPBG00000014029	PAN2	100	85.225	ENSRNOG00000032441	Pan2	100	85.225	Rattus_norvegicus
ENSCPBG00000014029	PAN2	100	85.928	ENSRBIG00000029591	PAN2	99	87.433	Rhinopithecus_bieti
ENSCPBG00000014029	PAN2	100	85.845	ENSRROG00000041950	PAN2	99	87.433	Rhinopithecus_roxellana
ENSCPBG00000014029	PAN2	100	85.928	ENSSBOG00000027343	PAN2	99	87.500	Saimiri_boliviensis_boliviensis
ENSCPBG00000014029	PAN2	92	87.392	ENSSHAG00000000122	PAN2	100	88.208	Sarcophilus_harrisii
ENSCPBG00000014029	PAN2	100	78.282	ENSSFOG00015017740	pan2	99	78.613	Scleropages_formosus
ENSCPBG00000014029	PAN2	100	75.848	ENSSMAG00000020901	pan2	100	76.179	Scophthalmus_maximus
ENSCPBG00000014029	PAN2	100	76.834	ENSSDUG00000001840	pan2	99	77.183	Seriola_dumerili
ENSCPBG00000014029	PAN2	100	76.777	ENSSLDG00000013866	pan2	100	77.089	Seriola_lalandi_dorsalis
ENSCPBG00000014029	PAN2	92	85.056	ENSSARG00000013350	PAN2	92	84.831	Sorex_araneus
ENSCPBG00000014029	PAN2	92	92.488	ENSSPUG00000004270	PAN2	99	92.287	Sphenodon_punctatus
ENSCPBG00000014029	PAN2	100	77.100	ENSSPAG00000019970	pan2	100	76.675	Stegastes_partitus
ENSCPBG00000014029	PAN2	100	85.595	ENSSSCG00000000393	PAN2	100	85.583	Sus_scrofa
ENSCPBG00000014029	PAN2	100	77.741	ENSTRUG00000014260	pan2	99	77.824	Takifugu_rubripes
ENSCPBG00000014029	PAN2	100	77.063	ENSTNIG00000012537	pan2	99	77.145	Tetraodon_nigroviridis
ENSCPBG00000014029	PAN2	80	84.793	ENSTTRG00000007150	PAN2	80	84.793	Tursiops_truncatus
ENSCPBG00000014029	PAN2	100	85.880	ENSUAMG00000026522	PAN2	100	85.714	Ursus_americanus
ENSCPBG00000014029	PAN2	100	85.455	ENSUMAG00000017020	PAN2	100	85.289	Ursus_maritimus
ENSCPBG00000014029	PAN2	83	95.288	ENSVPAG00000007309	PAN2	85	95.567	Vicugna_pacos
ENSCPBG00000014029	PAN2	100	85.762	ENSVVUG00000021878	PAN2	100	85.595	Vulpes_vulpes
ENSCPBG00000014029	PAN2	99	82.779	ENSXETG00000009434	pan2	100	82.925	Xenopus_tropicalis
ENSCPBG00000014029	PAN2	100	73.610	ENSXCOG00000014391	pan2	100	73.444	Xiphophorus_couchianus
ENSCPBG00000014029	PAN2	100	77.374	ENSXMAG00000011661	pan2	100	77.012	Xiphophorus_maculatus