EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPBG00000014074 (Gene tree)
Gene ID
101939420
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Chrysemys_picta_bellii
Status
putative
Strand
Minus strand
Length
50766 bases
Position
chrKK088203.1:8331535-8382300
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPBP00000019474CPSF73-100_CPF11718.84.2e-5411
ENSCPBP00000019474Beta-CaspPF10996.86.7e-3411
ENSCPBP00000019474Lactamase_BPF00753.271.5e-1811
ENSCPBP00000019474RMMBLPF07521.122.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPBT00000022932CPSF3-2012508-ENSCPBP00000019474691 (aa)XP_005287800UPI000388D062
Gene Model
Click here to download ENSCPBG00000014074's gene model file
Pathways
Pathway IDPathway NameSource
cpic03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014074's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPBG00000014074CPSF35943.802ENSCPBG00000022634INTS118043.802
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPBG00000014074CPSF39995.455ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCPBG00000014074CPSF37495.874ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSCPBG00000014074CPSF39985.051ENSAPOG00000022087cpsf39985.051Acanthochromis_polyacanthus
ENSCPBG00000014074CPSF39996.041ENSAMEG00000008493CPSF39996.041Ailuropoda_melanoleuca
ENSCPBG00000014074CPSF39186.508ENSACIG00000023663CPSF39986.508Amphilophus_citrinellus
ENSCPBG00000014074CPSF39182.166ENSACIG00000009846cpsf39982.166Amphilophus_citrinellus
ENSCPBG00000014074CPSF39987.246ENSAOCG00000010077CPSF39987.246Amphiprion_ocellaris
ENSCPBG00000014074CPSF39985.196ENSAOCG00000022056cpsf39590.301Amphiprion_ocellaris
ENSCPBG00000014074CPSF39985.341ENSAPEG00000019526cpsf39986.212Amphiprion_percula
ENSCPBG00000014074CPSF39987.246ENSAPEG00000021167CPSF39987.246Amphiprion_percula
ENSCPBG00000014074CPSF39982.754ENSATEG00000014525CPSF39982.754Anabas_testudineus
ENSCPBG00000014074CPSF39985.196ENSATEG00000003959cpsf39985.196Anabas_testudineus
ENSCPBG00000014074CPSF39797.466ENSAPLG00000006941CPSF39897.466Anas_platyrhynchos
ENSCPBG00000014074CPSF39293.239ENSACAG00000001759CPSF310093.239Anolis_carolinensis
ENSCPBG00000014074CPSF39989.150ENSANAG00000031254CPSF39989.805Aotus_nancymaae
ENSCPBG00000014074CPSF39686.015ENSACLG00000014484cpsf39986.015Astatotilapia_calliptera
ENSCPBG00000014074CPSF39186.508ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSCPBG00000014074CPSF39987.971ENSAMXG00000004786cpsf39987.971Astyanax_mexicanus
ENSCPBG00000014074CPSF39995.894ENSBTAG00000019735CPSF39995.894Bos_taurus
ENSCPBG00000014074CPSF39258.257WBGene00013460cpsf-39258.257Caenorhabditis_elegans
ENSCPBG00000014074CPSF39995.601ENSCJAG00000006276CPSF39995.601Callithrix_jacchus
ENSCPBG00000014074CPSF39996.041ENSCAFG00000003375CPSF39596.041Canis_familiaris
ENSCPBG00000014074CPSF38997.087ENSCAFG00020026799CPSF39997.087Canis_lupus_dingo
ENSCPBG00000014074CPSF39995.894ENSCHIG00000013973CPSF39995.894Capra_hircus
ENSCPBG00000014074CPSF39995.455ENSTSYG00000002967CPSF39995.455Carlito_syrichta
ENSCPBG00000014074CPSF39694.595ENSCAPG00000013851CPSF39994.595Cavia_aperea
ENSCPBG00000014074CPSF39994.428ENSCPOG00000011299CPSF39994.428Cavia_porcellus
ENSCPBG00000014074CPSF39995.455ENSCCAG00000036730CPSF39995.652Cebus_capucinus
ENSCPBG00000014074CPSF39993.119ENSCATG00000014770CPSF39998.448Cercocebus_atys
ENSCPBG00000014074CPSF39994.428ENSCLAG00000002727CPSF39994.428Chinchilla_lanigera
ENSCPBG00000014074CPSF39987.683ENSCSAG00000007125CPSF39987.683Chlorocebus_sabaeus
ENSCPBG00000014074CPSF385100.000ENSCHOG00000000180CPSF38569.772Choloepus_hoffmanni
ENSCPBG00000014074CPSF39867.496ENSCING00000007214-9867.496Ciona_intestinalis
ENSCPBG00000014074CPSF39983.261ENSCANG00000034435CPSF39983.261Colobus_angolensis_palliatus
ENSCPBG00000014074CPSF39995.308ENSCGRG00001013134Cpsf39995.308Cricetulus_griseus_chok1gshd
ENSCPBG00000014074CPSF39995.308ENSCGRG00000018319Cpsf39995.308Cricetulus_griseus_crigri
ENSCPBG00000014074CPSF39986.252ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSCPBG00000014074CPSF39987.536ENSCVAG00000015067CPSF39987.536Cyprinodon_variegatus
ENSCPBG00000014074CPSF39988.261ENSDARG00000027649cpsf39988.261Danio_rerio
ENSCPBG00000014074CPSF39994.583ENSDNOG00000008940CPSF39594.583Dasypus_novemcinctus
ENSCPBG00000014074CPSF39496.308ENSDORG00000014263Cpsf39996.308Dipodomys_ordii
ENSCPBG00000014074CPSF39966.618FBgn0261065Cpsf739966.618Drosophila_melanogaster
ENSCPBG00000014074CPSF39483.538ENSETEG00000003893CPSF39983.538Echinops_telfairi
ENSCPBG00000014074CPSF39978.702ENSEBUG00000009018cpsf39978.843Eptatretus_burgeri
ENSCPBG00000014074CPSF39996.041ENSEASG00005003970CPSF39996.041Equus_asinus_asinus
ENSCPBG00000014074CPSF39996.041ENSECAG00000019911CPSF39996.041Equus_caballus
ENSCPBG00000014074CPSF39980.352ENSEEUG00000015422CPSF39980.352Erinaceus_europaeus
ENSCPBG00000014074CPSF39987.954ENSELUG00000013775cpsf39987.954Esox_lucius
ENSCPBG00000014074CPSF39995.894ENSFCAG00000007852CPSF39995.975Felis_catus
ENSCPBG00000014074CPSF39397.523ENSFALG00000006572CPSF39997.523Ficedula_albicollis
ENSCPBG00000014074CPSF39994.567ENSFDAG00000006317CPSF39994.567Fukomys_damarensis
ENSCPBG00000014074CPSF35968.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSCPBG00000014074CPSF39984.470ENSFHEG00000014774cpsf39984.470Fundulus_heteroclitus
ENSCPBG00000014074CPSF39985.797ENSGMOG00000003157cpsf39985.797Gadus_morhua
ENSCPBG00000014074CPSF39996.657ENSGALG00000016424CPSF39996.657Gallus_gallus
ENSCPBG00000014074CPSF39987.954ENSGAFG00000008016CPSF39987.954Gambusia_affinis
ENSCPBG00000014074CPSF39182.512ENSGAFG00000019449cpsf39976.667Gambusia_affinis
ENSCPBG00000014074CPSF36899.143ENSGAGG00000025583CPSF39399.143Gopherus_agassizii
ENSCPBG00000014074CPSF39993.257ENSGGOG00000001757CPSF39995.584Gorilla_gorilla
ENSCPBG00000014074CPSF35979.753ENSHBUG00000014332CPSF39979.753Haplochromis_burtoni
ENSCPBG00000014074CPSF39985.776ENSHBUG00000001188cpsf39985.776Haplochromis_burtoni
ENSCPBG00000014074CPSF39994.126ENSHGLG00000000666CPSF39994.126Heterocephalus_glaber_female
ENSCPBG00000014074CPSF39994.126ENSHGLG00100007765CPSF39994.126Heterocephalus_glaber_male
ENSCPBG00000014074CPSF39985.652ENSHCOG00000015957CPSF39985.652Hippocampus_comes
ENSCPBG00000014074CPSF39984.783ENSHCOG00000007251cpsf39984.783Hippocampus_comes
ENSCPBG00000014074CPSF39985.942ENSIPUG00000023488cpsf39985.942Ictalurus_punctatus
ENSCPBG00000014074CPSF39995.894ENSSTOG00000004476CPSF39995.894Ictidomys_tridecemlineatus
ENSCPBG00000014074CPSF39994.721ENSJJAG00000023415Cpsf39994.721Jaculus_jaculus
ENSCPBG00000014074CPSF39987.391ENSKMAG00000007317CPSF39987.391Kryptolebias_marmoratus
ENSCPBG00000014074CPSF39984.325ENSKMAG00000002806cpsf39984.325Kryptolebias_marmoratus
ENSCPBG00000014074CPSF35478.933ENSLBEG00000015018-9978.933Labrus_bergylta
ENSCPBG00000014074CPSF39588.450ENSLBEG00000013492CPSF39988.450Labrus_bergylta
ENSCPBG00000014074CPSF39978.374ENSLBEG00000020569cpsf39678.374Labrus_bergylta
ENSCPBG00000014074CPSF39983.164ENSLACG00000008308CPSF39983.164Latimeria_chalumnae
ENSCPBG00000014074CPSF39988.423ENSLOCG00000016823cpsf39988.423Lepisosteus_oculatus
ENSCPBG00000014074CPSF39894.993ENSLAFG00000009467CPSF39994.993Loxodonta_africana
ENSCPBG00000014074CPSF39995.455ENSMFAG00000001339CPSF39995.504Macaca_fascicularis
ENSCPBG00000014074CPSF39395.511ENSMMUG00000018038CPSF39995.511Macaca_mulatta
ENSCPBG00000014074CPSF39982.698ENSMNEG00000039447CPSF39982.698Macaca_nemestrina
ENSCPBG00000014074CPSF39995.601ENSMLEG00000026825CPSF39995.601Mandrillus_leucophaeus
ENSCPBG00000014074CPSF39184.968ENSMAMG00000008835CPSF39978.757Mastacembelus_armatus
ENSCPBG00000014074CPSF39985.631ENSMAMG00000003076cpsf39985.631Mastacembelus_armatus
ENSCPBG00000014074CPSF39987.971ENSMZEG00005006258CPSF39987.971Maylandia_zebra
ENSCPBG00000014074CPSF39985.776ENSMZEG00005014358cpsf39985.776Maylandia_zebra
ENSCPBG00000014074CPSF39696.547ENSMGAG00000013995CPSF39996.547Meleagris_gallopavo
ENSCPBG00000014074CPSF35490.933ENSMAUG00000000166Cpsf39990.933Mesocricetus_auratus
ENSCPBG00000014074CPSF39990.469ENSMICG00000002363CPSF39990.469Microcebus_murinus
ENSCPBG00000014074CPSF39990.909ENSMOCG00000020067Cpsf39990.909Microtus_ochrogaster
ENSCPBG00000014074CPSF38070.833ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCPBG00000014074CPSF39382.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSCPBG00000014074CPSF39994.194ENSMODG00000014703CPSF39994.194Monodelphis_domestica
ENSCPBG00000014074CPSF39985.776ENSMALG00000016416cpsf39985.776Monopterus_albus
ENSCPBG00000014074CPSF39283.281ENSMALG00000011474CPSF39983.281Monopterus_albus
ENSCPBG00000014074CPSF39994.868MGP_CAROLIEiJ_G0017640Cpsf39994.868Mus_caroli
ENSCPBG00000014074CPSF39994.868ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSCPBG00000014074CPSF39994.721MGP_PahariEiJ_G0029397Cpsf39994.721Mus_pahari
ENSCPBG00000014074CPSF39994.868MGP_SPRETEiJ_G0018481Cpsf39994.868Mus_spretus
ENSCPBG00000014074CPSF39995.448ENSMPUG00000013213CPSF39995.448Mustela_putorius_furo
ENSCPBG00000014074CPSF39995.168ENSMLUG00000010636CPSF39995.168Myotis_lucifugus
ENSCPBG00000014074CPSF39995.308ENSNGAG00000019836Cpsf39995.308Nannospalax_galili
ENSCPBG00000014074CPSF39985.486ENSNBRG00000004770cpsf39985.486Neolamprologus_brichardi
ENSCPBG00000014074CPSF39186.508ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSCPBG00000014074CPSF39995.455ENSNLEG00000013359CPSF39995.511Nomascus_leucogenys
ENSCPBG00000014074CPSF39863.382ENSMEUG00000013117-9963.196Notamacropus_eugenii
ENSCPBG00000014074CPSF39887.187ENSOPRG00000008902CPSF39987.187Ochotona_princeps
ENSCPBG00000014074CPSF39994.428ENSODEG00000003129CPSF39994.428Octodon_degus
ENSCPBG00000014074CPSF39986.067ENSONIG00000018812cpsf39986.067Oreochromis_niloticus
ENSCPBG00000014074CPSF38195.382ENSOANG00000008577CPSF39995.382Ornithorhynchus_anatinus
ENSCPBG00000014074CPSF39995.748ENSOCUG00000003728CPSF39995.748Oryctolagus_cuniculus
ENSCPBG00000014074CPSF39983.454ENSORLG00000018854cpsf39983.454Oryzias_latipes
ENSCPBG00000014074CPSF39983.309ENSORLG00020013331cpsf39983.309Oryzias_latipes_hni
ENSCPBG00000014074CPSF39983.454ENSORLG00015011017cpsf39983.454Oryzias_latipes_hsok
ENSCPBG00000014074CPSF39983.454ENSOMEG00000010647cpsf39583.454Oryzias_melastigma
ENSCPBG00000014074CPSF39985.777ENSOGAG00000001680CPSF39985.777Otolemur_garnettii
ENSCPBG00000014074CPSF39995.894ENSOARG00000015073CPSF39995.894Ovis_aries
ENSCPBG00000014074CPSF39995.601ENSPPAG00000042457CPSF39995.601Pan_paniscus
ENSCPBG00000014074CPSF39995.601ENSPPRG00000016790CPSF39995.666Panthera_pardus
ENSCPBG00000014074CPSF39895.876ENSPTIG00000003920CPSF39995.876Panthera_tigris_altaica
ENSCPBG00000014074CPSF39995.601ENSPTRG00000011638CPSF39995.601Pan_troglodytes
ENSCPBG00000014074CPSF39995.308ENSPANG00000016798CPSF39995.308Papio_anubis
ENSCPBG00000014074CPSF39988.679ENSPKIG00000023646cpsf39988.837Paramormyrops_kingsleyae
ENSCPBG00000014074CPSF39897.797ENSPSIG00000016144CPSF39997.797Pelodiscus_sinensis
ENSCPBG00000014074CPSF37987.455ENSPMGG00000006141-9587.455Periophthalmus_magnuspinnatus
ENSCPBG00000014074CPSF35978.519ENSPMGG00000015311CPSF39978.519Periophthalmus_magnuspinnatus
ENSCPBG00000014074CPSF39994.868ENSPEMG00000017668Cpsf39994.868Peromyscus_maniculatus_bairdii
ENSCPBG00000014074CPSF37890.055ENSPMAG00000004841cpsf39990.055Petromyzon_marinus
ENSCPBG00000014074CPSF39695.495ENSPCIG00000009823CPSF39895.859Phascolarctos_cinereus
ENSCPBG00000014074CPSF39987.663ENSPFOG00000010418-9987.663Poecilia_formosa
ENSCPBG00000014074CPSF39984.783ENSPFOG00000015922cpsf39984.783Poecilia_formosa
ENSCPBG00000014074CPSF39984.783ENSPLAG00000000882cpsf39984.783Poecilia_latipinna
ENSCPBG00000014074CPSF35881.436ENSPLAG00000021300-9981.436Poecilia_latipinna
ENSCPBG00000014074CPSF39984.928ENSPMEG00000018309cpsf39984.928Poecilia_mexicana
ENSCPBG00000014074CPSF39182.671ENSPREG00000014875cpsf39976.812Poecilia_reticulata
ENSCPBG00000014074CPSF39982.874ENSPREG00000004482CPSF39982.874Poecilia_reticulata
ENSCPBG00000014074CPSF39991.056ENSPPYG00000012666CPSF39991.056Pongo_abelii
ENSCPBG00000014074CPSF39462.809ENSPCAG00000015042CPSF39962.809Procavia_capensis
ENSCPBG00000014074CPSF38987.500ENSPCOG00000023016CPSF39987.500Propithecus_coquereli
ENSCPBG00000014074CPSF39995.461ENSPVAG00000005324CPSF39995.461Pteropus_vampyrus
ENSCPBG00000014074CPSF39985.776ENSPNYG00000004405cpsf39985.776Pundamilia_nyererei
ENSCPBG00000014074CPSF37890.608ENSPNYG00000021047CPSF39190.608Pundamilia_nyererei
ENSCPBG00000014074CPSF39987.101ENSPNAG00000023060cpsf39987.101Pygocentrus_nattereri
ENSCPBG00000014074CPSF39994.860ENSRNOG00000052418Cpsf39994.860Rattus_norvegicus
ENSCPBG00000014074CPSF39989.589ENSRBIG00000041615CPSF39991.022Rhinopithecus_bieti
ENSCPBG00000014074CPSF39995.601ENSRROG00000033792CPSF39995.601Rhinopithecus_roxellana
ENSCPBG00000014074CPSF39240.940YLR277CYSH19540.940Saccharomyces_cerevisiae
ENSCPBG00000014074CPSF39691.194ENSSBOG00000027263CPSF39791.194Saimiri_boliviensis_boliviensis
ENSCPBG00000014074CPSF39995.455ENSSHAG00000007024CPSF39995.455Sarcophilus_harrisii
ENSCPBG00000014074CPSF39989.260ENSSFOG00015002108cpsf39989.260Scleropages_formosus
ENSCPBG00000014074CPSF39586.474ENSSMAG00000020534CPSF39786.474Scophthalmus_maximus
ENSCPBG00000014074CPSF39985.631ENSSDUG00000002828cpsf39785.631Seriola_dumerili
ENSCPBG00000014074CPSF39987.536ENSSDUG00000018498CPSF39987.536Seriola_dumerili
ENSCPBG00000014074CPSF39985.631ENSSLDG00000008469cpsf39390.134Seriola_lalandi_dorsalis
ENSCPBG00000014074CPSF39987.536ENSSLDG00000005234CPSF39987.536Seriola_lalandi_dorsalis
ENSCPBG00000014074CPSF39978.592ENSSARG00000005186CPSF39978.592Sorex_araneus
ENSCPBG00000014074CPSF39694.179ENSSPUG00000015525CPSF39794.179Sphenodon_punctatus
ENSCPBG00000014074CPSF39985.631ENSSPAG00000018579cpsf39985.631Stegastes_partitus
ENSCPBG00000014074CPSF39987.246ENSSPAG00000002906CPSF39987.246Stegastes_partitus
ENSCPBG00000014074CPSF39995.894ENSSSCG00000020799CPSF39995.894Sus_scrofa
ENSCPBG00000014074CPSF39997.365ENSTGUG00000013016CPSF39997.365Taeniopygia_guttata
ENSCPBG00000014074CPSF39985.341ENSTRUG00000007030cpsf39885.341Takifugu_rubripes
ENSCPBG00000014074CPSF35873.219ENSTRUG00000013905CPSF39973.219Takifugu_rubripes
ENSCPBG00000014074CPSF38493.132ENSTBEG00000002707CPSF38493.132Tupaia_belangeri
ENSCPBG00000014074CPSF38785.946ENSTTRG00000000861CPSF38785.946Tursiops_truncatus
ENSCPBG00000014074CPSF39596.489ENSUAMG00000007535CPSF39496.489Ursus_americanus
ENSCPBG00000014074CPSF39396.130ENSUMAG00000003676CPSF39996.130Ursus_maritimus
ENSCPBG00000014074CPSF39294.164ENSVPAG00000008041CPSF310094.164Vicugna_pacos
ENSCPBG00000014074CPSF39996.041ENSVVUG00000002194CPSF39996.041Vulpes_vulpes
ENSCPBG00000014074CPSF39989.840ENSXETG00000008263cpsf39989.840Xenopus_tropicalis
ENSCPBG00000014074CPSF35480.054ENSXCOG00000000957-8780.054Xiphophorus_couchianus
ENSCPBG00000014074CPSF39984.928ENSXCOG00000019695cpsf39984.928Xiphophorus_couchianus
ENSCPBG00000014074CPSF39984.783ENSXMAG00000009784cpsf39984.783Xiphophorus_maculatus
ENSCPBG00000014074CPSF39987.808ENSXMAG00000027291CPSF39987.808Xiphophorus_maculatus

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