EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000014293 (Gene tree)
Gene ID: 101947188
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 18475 bases
Position: chr8:13645974-13664448
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019858	RRM_1	PF00076.22	2.6e-25	1	1
ENSCPBP00000019856	RRM_1	PF00076.22	2.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023367	CSTF2-201	2355	XM_005288335	ENSCPBP00000019856	642 (aa)	XP_005288392	UPI000388DC6C
ENSCPBT00000023369	CSTF2-202	2295	XM_005288336	ENSCPBP00000019858	622 (aa)	XP_005288393	UPI000388A14C

Gene Model

Click here to download ENSCPBG00000014293's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014293	CSTF2	100	76.425	ENSG00000101811	CSTF2	96	87.558	Homo_sapiens
ENSCPBG00000014293	CSTF2	89	68.810	ENSAPOG00000005630	cstf2	97	68.000	Acanthochromis_polyacanthus
ENSCPBG00000014293	CSTF2	100	76.651	ENSAMEG00000002082	CSTF2	100	77.519	Ailuropoda_melanoleuca
ENSCPBG00000014293	CSTF2	65	84.898	ENSACIG00000012852	cstf2	97	67.689	Amphilophus_citrinellus
ENSCPBG00000014293	CSTF2	89	69.048	ENSAOCG00000020905	cstf2	97	67.529	Amphiprion_ocellaris
ENSCPBG00000014293	CSTF2	89	69.048	ENSAPEG00000006526	cstf2	97	68.000	Amphiprion_percula
ENSCPBG00000014293	CSTF2	90	67.067	ENSATEG00000018186	cstf2	97	66.271	Anabas_testudineus
ENSCPBG00000014293	CSTF2	97	84.603	ENSAPLG00000007255	CSTF2	98	84.335	Anas_platyrhynchos
ENSCPBG00000014293	CSTF2	100	75.963	ENSANAG00000022342	CSTF2	100	76.205	Aotus_nancymaae
ENSCPBG00000014293	CSTF2	90	69.065	ENSACLG00000000779	cstf2	94	68.160	Astatotilapia_calliptera
ENSCPBG00000014293	CSTF2	63	98.413	ENSAMXG00000021477	cstf2	98	92.754	Astyanax_mexicanus
ENSCPBG00000014293	CSTF2	100	75.199	ENSBTAG00000003547	CSTF2	100	75.441	Bos_taurus
ENSCPBG00000014293	CSTF2	100	76.117	ENSCJAG00000004422	CSTF2	100	87.291	Callithrix_jacchus
ENSCPBG00000014293	CSTF2	100	76.312	ENSCAFG00000017551	CSTF2	100	76.565	Canis_familiaris
ENSCPBG00000014293	CSTF2	100	76.579	ENSCAFG00020007619	CSTF2	100	76.827	Canis_lupus_dingo
ENSCPBG00000014293	CSTF2	100	75.199	ENSCHIG00000016994	CSTF2	100	75.441	Capra_hircus
ENSCPBG00000014293	CSTF2	100	77.196	ENSTSYG00000006529	CSTF2	100	77.449	Carlito_syrichta
ENSCPBG00000014293	CSTF2	100	76.271	ENSCPOG00000015255	CSTF2	89	91.411	Cavia_porcellus
ENSCPBG00000014293	CSTF2	100	76.117	ENSCCAG00000032975	CSTF2	100	76.361	Cebus_capucinus
ENSCPBG00000014293	CSTF2	100	76.117	ENSCATG00000022835	CSTF2	100	76.361	Cercocebus_atys
ENSCPBG00000014293	CSTF2	100	75.963	ENSCLAG00000001904	CSTF2	87	92.500	Chinchilla_lanigera
ENSCPBG00000014293	CSTF2	100	76.117	ENSCSAG00000010360	CSTF2	100	76.361	Chlorocebus_sabaeus
ENSCPBG00000014293	CSTF2	63	96.855	ENSCHOG00000012803	CSTF2	63	96.855	Choloepus_hoffmanni
ENSCPBG00000014293	CSTF2	100	76.117	ENSCANG00000030612	CSTF2	100	76.361	Colobus_angolensis_palliatus
ENSCPBG00000014293	CSTF2	100	74.281	ENSCGRG00001023023	Cstf2	100	73.259	Cricetulus_griseus_chok1gshd
ENSCPBG00000014293	CSTF2	100	72.627	ENSCGRG00000003897	Cstf2	100	73.280	Cricetulus_griseus_crigri
ENSCPBG00000014293	CSTF2	92	69.575	ENSCVAG00000005731	cstf2	97	70.139	Cyprinodon_variegatus
ENSCPBG00000014293	CSTF2	73	82.000	ENSDARG00000090788	cstf2	97	93.750	Danio_rerio
ENSCPBG00000014293	CSTF2	100	74.560	ENSDORG00000007195	Cstf2	89	92.593	Dipodomys_ordii
ENSCPBG00000014293	CSTF2	70	82.143	ENSETEG00000004931	CSTF2	68	82.143	Echinops_telfairi
ENSCPBG00000014293	CSTF2	100	76.888	ENSEASG00005001216	CSTF2	100	77.294	Equus_asinus_asinus
ENSCPBG00000014293	CSTF2	100	76.888	ENSECAG00000009325	CSTF2	100	77.294	Equus_caballus
ENSCPBG00000014293	CSTF2	100	76.425	ENSFCAG00000007000	CSTF2	100	76.672	Felis_catus
ENSCPBG00000014293	CSTF2	93	83.802	ENSFALG00000003859	CSTF2	100	84.692	Ficedula_albicollis
ENSCPBG00000014293	CSTF2	100	76.948	ENSFDAG00000002416	CSTF2	100	77.207	Fukomys_damarensis
ENSCPBG00000014293	CSTF2	93	68.519	ENSFHEG00000017065	cstf2	94	67.391	Fundulus_heteroclitus
ENSCPBG00000014293	CSTF2	74	90.000	ENSGMOG00000005145	cstf2	99	65.358	Gadus_morhua
ENSCPBG00000014293	CSTF2	100	85.417	ENSGALG00000006760	CSTF2	99	95.333	Gallus_gallus
ENSCPBG00000014293	CSTF2	66	82.470	ENSGAFG00000020027	cstf2	97	66.133	Gambusia_affinis
ENSCPBG00000014293	CSTF2	92	64.828	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSCPBG00000014293	CSTF2	100	95.820	ENSGAGG00000006037	CSTF2	100	95.820	Gopherus_agassizii
ENSCPBG00000014293	CSTF2	100	76.425	ENSGGOG00000022267	CSTF2	100	76.672	Gorilla_gorilla
ENSCPBG00000014293	CSTF2	90	68.974	ENSHBUG00000016183	cstf2	94	68.075	Haplochromis_burtoni
ENSCPBG00000014293	CSTF2	100	76.471	ENSHGLG00000000659	-	88	90.909	Heterocephalus_glaber_female
ENSCPBG00000014293	CSTF2	100	65.660	ENSHGLG00000013455	-	100	66.453	Heterocephalus_glaber_female
ENSCPBG00000014293	CSTF2	100	65.660	ENSHGLG00100015391	-	100	66.453	Heterocephalus_glaber_male
ENSCPBG00000014293	CSTF2	100	76.471	ENSHGLG00100001130	-	88	90.909	Heterocephalus_glaber_male
ENSCPBG00000014293	CSTF2	89	67.696	ENSHCOG00000005157	cstf2	98	66.509	Hippocampus_comes
ENSCPBG00000014293	CSTF2	90	72.365	ENSIPUG00000017839	cstf2	99	73.832	Ictalurus_punctatus
ENSCPBG00000014293	CSTF2	100	76.358	ENSSTOG00000023445	CSTF2	87	92.453	Ictidomys_tridecemlineatus
ENSCPBG00000014293	CSTF2	100	76.244	ENSJJAG00000020507	Cstf2	87	92.453	Jaculus_jaculus
ENSCPBG00000014293	CSTF2	65	85.306	ENSKMAG00000001068	cstf2	97	68.765	Kryptolebias_marmoratus
ENSCPBG00000014293	CSTF2	99	67.428	ENSLACG00000015927	CSTF2	99	66.921	Latimeria_chalumnae
ENSCPBG00000014293	CSTF2	92	73.721	ENSLOCG00000015300	cstf2	94	72.706	Lepisosteus_oculatus
ENSCPBG00000014293	CSTF2	100	76.471	ENSLAFG00000000474	CSTF2	100	77.245	Loxodonta_africana
ENSCPBG00000014293	CSTF2	100	76.117	ENSMFAG00000043888	CSTF2	100	76.361	Macaca_fascicularis
ENSCPBG00000014293	CSTF2	100	75.655	ENSMMUG00000013008	CSTF2	100	75.739	Macaca_mulatta
ENSCPBG00000014293	CSTF2	100	76.117	ENSMNEG00000041824	CSTF2	100	76.361	Macaca_nemestrina
ENSCPBG00000014293	CSTF2	100	76.117	ENSMLEG00000036870	CSTF2	100	76.361	Mandrillus_leucophaeus
ENSCPBG00000014293	CSTF2	90	66.667	ENSMAMG00000020364	cstf2	96	66.348	Mastacembelus_armatus
ENSCPBG00000014293	CSTF2	90	69.065	ENSMZEG00005007200	cstf2	97	68.160	Maylandia_zebra
ENSCPBG00000014293	CSTF2	93	76.070	ENSMGAG00000004139	CSTF2	99	93.281	Meleagris_gallopavo
ENSCPBG00000014293	CSTF2	100	74.601	ENSMAUG00000000965	Cstf2	100	74.684	Mesocricetus_auratus
ENSCPBG00000014293	CSTF2	100	77.196	ENSMICG00000014121	CSTF2	100	77.449	Microcebus_murinus
ENSCPBG00000014293	CSTF2	100	74.684	ENSMOCG00000008081	Cstf2	100	74.209	Microtus_ochrogaster
ENSCPBG00000014293	CSTF2	58	94.924	ENSMMOG00000000538	cstf2	86	94.000	Mola_mola
ENSCPBG00000014293	CSTF2	100	75.501	ENSMODG00000011785	CSTF2	100	77.570	Monodelphis_domestica
ENSCPBG00000014293	CSTF2	100	74.281	MGP_CAROLIEiJ_G0033383	Cstf2	87	92.500	Mus_caroli
ENSCPBG00000014293	CSTF2	100	74.121	ENSMUSG00000031256	Cstf2	87	92.500	Mus_musculus
ENSCPBG00000014293	CSTF2	100	74.400	MGP_PahariEiJ_G0031923	Cstf2	100	74.880	Mus_pahari
ENSCPBG00000014293	CSTF2	100	74.121	MGP_SPRETEiJ_G0034548	Cstf2	87	92.500	Mus_spretus
ENSCPBG00000014293	CSTF2	100	73.560	ENSMPUG00000002339	CSTF2	100	73.770	Mustela_putorius_furo
ENSCPBG00000014293	CSTF2	100	72.834	ENSMLUG00000004598	CSTF2	98	72.889	Myotis_lucifugus
ENSCPBG00000014293	CSTF2	100	75.594	ENSNGAG00000021985	Cstf2	100	76.000	Nannospalax_galili
ENSCPBG00000014293	CSTF2	69	91.176	ENSNBRG00000021694	cstf2	93	91.667	Neolamprologus_brichardi
ENSCPBG00000014293	CSTF2	100	76.271	ENSNLEG00000007510	CSTF2	100	76.516	Nomascus_leucogenys
ENSCPBG00000014293	CSTF2	100	75.199	ENSMEUG00000011186	-	100	77.492	Notamacropus_eugenii
ENSCPBG00000014293	CSTF2	92	72.491	ENSMEUG00000014025	-	100	73.702	Notamacropus_eugenii
ENSCPBG00000014293	CSTF2	100	72.814	ENSMEUG00000007875	-	100	73.802	Notamacropus_eugenii
ENSCPBG00000014293	CSTF2	87	77.064	ENSOPRG00000003106	CSTF2	83	78.109	Ochotona_princeps
ENSCPBG00000014293	CSTF2	100	75.994	ENSODEG00000002059	CSTF2	100	76.083	Octodon_degus
ENSCPBG00000014293	CSTF2	97	72.031	ENSOANG00000004208	CSTF2	100	71.768	Ornithorhynchus_anatinus
ENSCPBG00000014293	CSTF2	100	75.517	ENSOCUG00000010468	CSTF2	100	75.602	Oryctolagus_cuniculus
ENSCPBG00000014293	CSTF2	93	67.447	ENSORLG00000001380	cstf2	97	66.284	Oryzias_latipes
ENSCPBG00000014293	CSTF2	93	67.447	ENSORLG00020021917	cstf2	97	66.284	Oryzias_latipes_hni
ENSCPBG00000014293	CSTF2	93	67.447	ENSORLG00015011996	cstf2	97	66.284	Oryzias_latipes_hsok
ENSCPBG00000014293	CSTF2	91	67.832	ENSOMEG00000015507	cstf2	97	67.361	Oryzias_melastigma
ENSCPBG00000014293	CSTF2	100	71.219	ENSOGAG00000011192	CSTF2	100	72.741	Otolemur_garnettii
ENSCPBG00000014293	CSTF2	100	75.199	ENSOARG00000001022	CSTF2	100	75.441	Ovis_aries
ENSCPBG00000014293	CSTF2	100	76.425	ENSPPAG00000031804	CSTF2	100	76.672	Pan_paniscus
ENSCPBG00000014293	CSTF2	100	76.425	ENSPPRG00000022492	CSTF2	100	76.672	Panthera_pardus
ENSCPBG00000014293	CSTF2	100	76.117	ENSPTIG00000009922	CSTF2	100	76.361	Panthera_tigris_altaica
ENSCPBG00000014293	CSTF2	100	76.425	ENSPTRG00000022090	CSTF2	100	76.672	Pan_troglodytes
ENSCPBG00000014293	CSTF2	100	76.117	ENSPANG00000002303	CSTF2	100	76.361	Papio_anubis
ENSCPBG00000014293	CSTF2	90	71.154	ENSPKIG00000005033	cstf2	98	68.483	Paramormyrops_kingsleyae
ENSCPBG00000014293	CSTF2	93	66.370	ENSPMGG00000006534	cstf2	97	67.898	Periophthalmus_magnuspinnatus
ENSCPBG00000014293	CSTF2	100	74.684	ENSPEMG00000019415	Cstf2	100	74.209	Peromyscus_maniculatus_bairdii
ENSCPBG00000014293	CSTF2	100	75.498	ENSPCIG00000002989	CSTF2	100	77.399	Phascolarctos_cinereus
ENSCPBG00000014293	CSTF2	92	60.360	ENSPLAG00000011176	cstf2	97	64.143	Poecilia_latipinna
ENSCPBG00000014293	CSTF2	66	82.869	ENSPMEG00000017743	cstf2	97	64.143	Poecilia_mexicana
ENSCPBG00000014293	CSTF2	100	76.271	ENSPPYG00000020541	CSTF2	100	76.516	Pongo_abelii
ENSCPBG00000014293	CSTF2	100	76.271	ENSPCOG00000027744	CSTF2	100	76.516	Propithecus_coquereli
ENSCPBG00000014293	CSTF2	97	62.890	ENSPVAG00000008342	CSTF2	100	63.184	Pteropus_vampyrus
ENSCPBG00000014293	CSTF2	65	85.830	ENSPNYG00000010852	cstf2	96	88.462	Pundamilia_nyererei
ENSCPBG00000014293	CSTF2	92	72.082	ENSPNAG00000018887	cstf2	99	73.349	Pygocentrus_nattereri
ENSCPBG00000014293	CSTF2	100	74.367	ENSRNOG00000048025	Cstf2	100	74.441	Rattus_norvegicus
ENSCPBG00000014293	CSTF2	100	75.358	ENSRBIG00000030745	CSTF2	100	75.602	Rhinopithecus_bieti
ENSCPBG00000014293	CSTF2	100	76.117	ENSRROG00000045042	CSTF2	100	76.361	Rhinopithecus_roxellana
ENSCPBG00000014293	CSTF2	100	75.963	ENSSBOG00000021649	CSTF2	100	76.205	Saimiri_boliviensis_boliviensis
ENSCPBG00000014293	CSTF2	97	75.279	ENSSHAG00000003681	CSTF2	99	69.310	Sarcophilus_harrisii
ENSCPBG00000014293	CSTF2	87	72.398	ENSSFOG00015006348	cstf2	98	71.596	Scleropages_formosus
ENSCPBG00000014293	CSTF2	93	64.811	ENSSMAG00000013463	cstf2	97	67.972	Scophthalmus_maximus
ENSCPBG00000014293	CSTF2	100	75.114	ENSSPUG00000005288	-	97	92.141	Sphenodon_punctatus
ENSCPBG00000014293	CSTF2	100	76.271	ENSSSCG00000012486	CSTF2	100	85.284	Sus_scrofa
ENSCPBG00000014293	CSTF2	100	83.886	ENSTGUG00000002253	CSTF2	100	84.984	Taeniopygia_guttata
ENSCPBG00000014293	CSTF2	91	69.104	ENSTNIG00000016860	cstf2	99	66.897	Tetraodon_nigroviridis
ENSCPBG00000014293	CSTF2	52	100.000	ENSTBEG00000010029	-	59	100.000	Tupaia_belangeri
ENSCPBG00000014293	CSTF2	100	75.835	ENSTTRG00000013556	CSTF2	100	76.083	Tursiops_truncatus
ENSCPBG00000014293	CSTF2	100	77.042	ENSUAMG00000026605	CSTF2	100	77.294	Ursus_americanus
ENSCPBG00000014293	CSTF2	100	70.262	ENSUMAG00000012417	CSTF2	99	86.254	Ursus_maritimus
ENSCPBG00000014293	CSTF2	67	86.087	ENSVPAG00000006466	CSTF2	71	84.928	Vicugna_pacos
ENSCPBG00000014293	CSTF2	100	76.312	ENSVVUG00000004717	CSTF2	100	76.565	Vulpes_vulpes
ENSCPBG00000014293	CSTF2	92	75.355	ENSXETG00000009642	cstf2	100	71.719	Xenopus_tropicalis
ENSCPBG00000014293	CSTF2	96	61.830	ENSXCOG00000016436	cstf2	95	92.958	Xiphophorus_couchianus
ENSCPBG00000014293	CSTF2	65	82.661	ENSXMAG00000013524	cstf2	97	58.824	Xiphophorus_maculatus