EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014327 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 29717 bases
Position: chrKK083081.1:1916025-1945741
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019903	APOBEC_N	PF08210.11	9.2e-33	1	1
ENSCPBP00000019904	APOBEC_N	PF08210.11	4.5e-27	1	1
ENSCPBP00000019905	APOBEC_N	PF08210.11	4.5e-27	1	1
ENSCPBP00000019901	APOBEC_N	PF08210.11	4.7e-27	1	1
ENSCPBP00000019903	APOBEC_C	PF05240.14	2e-21	1	1
ENSCPBP00000019904	APOBEC_C	PF05240.14	5.4e-20	1	1
ENSCPBP00000019905	APOBEC_C	PF05240.14	8.1e-20	1	1
ENSCPBP00000019901	APOBEC_C	PF05240.14	8.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023422	-	1495	-	ENSCPBP00000019904	257 (aa)	-	-
ENSCPBT00000023423	-	1714	-	ENSCPBP00000019905	252 (aa)	-	-
ENSCPBT00000023419	-	1794	-	ENSCPBP00000019901	252 (aa)	-	-
ENSCPBT00000023421	-	1665	-	ENSCPBP00000019903	266 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000014327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014327	-	77	45.128	ENSCPBG00000014331	-	81	45.128
ENSCPBG00000014327	-	86	41.176	ENSCPBG00000014335	-	83	42.439
ENSCPBG00000014327	-	92	44.958	ENSCPBG00000014329	-	65	44.958
ENSCPBG00000014327	-	79	83.886	ENSCPBG00000014328	-	93	83.886
ENSCPBG00000014327	-	64	91.716	ENSCPBG00000017398	-	74	91.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014327	-	81	39.437	ENSG00000111701	APOBEC1	88	38.498	Homo_sapiens
ENSCPBG00000014327	-	82	39.252	ENSAMEG00000007098	APOBEC1	89	38.967	Ailuropoda_melanoleuca
ENSCPBG00000014327	-	70	46.409	ENSACAG00000028578	-	99	45.604	Anolis_carolinensis
ENSCPBG00000014327	-	86	37.946	ENSANAG00000027743	APOBEC1	90	37.885	Aotus_nancymaae
ENSCPBG00000014327	-	82	38.389	ENSBTAG00000014683	APOBEC1	89	38.389	Bos_taurus
ENSCPBG00000014327	-	72	46.875	ENSCJAG00000005398	APOBEC1	86	46.875	Callithrix_jacchus
ENSCPBG00000014327	-	77	44.444	ENSCAFG00000013901	APOBEC1	87	44.444	Canis_familiaris
ENSCPBG00000014327	-	84	39.631	ENSCAFG00020003511	APOBEC1	84	46.040	Canis_lupus_dingo
ENSCPBG00000014327	-	84	38.889	ENSCHIG00000011898	APOBEC1	89	38.889	Capra_hircus
ENSCPBG00000014327	-	52	40.152	ENSTSYG00000029141	APOBEC1	84	49.580	Carlito_syrichta
ENSCPBG00000014327	-	71	45.026	ENSCAPG00000015882	-	88	45.026	Cavia_aperea
ENSCPBG00000014327	-	83	37.674	ENSCPOG00000033068	APOBEC1	80	45.550	Cavia_porcellus
ENSCPBG00000014327	-	81	40.566	ENSCCAG00000022258	APOBEC1	88	40.566	Cebus_capucinus
ENSCPBG00000014327	-	87	37.719	ENSCATG00000021613	APOBEC1	90	37.719	Cercocebus_atys
ENSCPBG00000014327	-	84	39.352	ENSCLAG00000014645	APOBEC1	89	43.961	Chinchilla_lanigera
ENSCPBG00000014327	-	63	47.024	ENSCSAG00000009817	APOBEC1	87	47.024	Chlorocebus_sabaeus
ENSCPBG00000014327	-	79	40.686	ENSCANG00000038359	APOBEC1	81	47.872	Colobus_angolensis_palliatus
ENSCPBG00000014327	-	83	37.674	ENSCGRG00001011130	Apobec1	93	41.743	Cricetulus_griseus_chok1gshd
ENSCPBG00000014327	-	83	37.674	ENSCGRG00000008644	Apobec1	93	41.743	Cricetulus_griseus_crigri
ENSCPBG00000014327	-	81	38.756	ENSDNOG00000010926	APOBEC1	88	38.756	Dasypus_novemcinctus
ENSCPBG00000014327	-	74	41.624	ENSDORG00000023717	Apobec1	92	41.624	Dipodomys_ordii
ENSCPBG00000014327	-	81	39.720	ENSETEG00000004867	APOBEC1	86	40.097	Echinops_telfairi
ENSCPBG00000014327	-	84	37.674	ENSEASG00005015951	APOBEC1	90	37.037	Equus_asinus_asinus
ENSCPBG00000014327	-	58	48.387	ENSECAG00000017163	APOBEC1	81	48.387	Equus_caballus
ENSCPBG00000014327	-	80	38.350	ENSEEUG00000009112	-	84	43.229	Erinaceus_europaeus
ENSCPBG00000014327	-	77	44.444	ENSFCAG00000009350	APOBEC1	87	44.444	Felis_catus
ENSCPBG00000014327	-	79	43.056	ENSFALG00000007257	-	89	43.056	Ficedula_albicollis
ENSCPBG00000014327	-	73	40.323	ENSFDAG00000018470	APOBEC1	88	43.011	Fukomys_damarensis
ENSCPBG00000014327	-	65	90.230	ENSGAGG00000006624	-	63	90.230	Gopherus_agassizii
ENSCPBG00000014327	-	62	51.807	ENSGAGG00000004947	-	82	51.807	Gopherus_agassizii
ENSCPBG00000014327	-	84	45.540	ENSGAGG00000011837	-	92	48.413	Gopherus_agassizii
ENSCPBG00000014327	-	81	79.710	ENSGAGG00000021745	-	74	81.159	Gopherus_agassizii
ENSCPBG00000014327	-	99	71.875	ENSGAGG00000021744	-	99	70.703	Gopherus_agassizii
ENSCPBG00000014327	-	82	41.038	ENSHGLG00000001495	APOBEC1	89	41.038	Heterocephalus_glaber_female
ENSCPBG00000014327	-	82	41.038	ENSHGLG00100002187	APOBEC1	89	41.038	Heterocephalus_glaber_male
ENSCPBG00000014327	-	53	39.552	ENSSTOG00000021971	APOBEC1	89	44.318	Ictidomys_tridecemlineatus
ENSCPBG00000014327	-	85	37.674	ENSJJAG00000022108	Apobec1	92	41.589	Jaculus_jaculus
ENSCPBG00000014327	-	78	39.594	ENSLAFG00000030837	APOBEC1	82	45.109	Loxodonta_africana
ENSCPBG00000014327	-	81	38.967	ENSMFAG00000000277	APOBEC1	87	47.024	Macaca_fascicularis
ENSCPBG00000014327	-	81	38.967	ENSMNEG00000029670	APOBEC1	88	38.967	Macaca_nemestrina
ENSCPBG00000014327	-	81	38.967	ENSMLEG00000036301	APOBEC1	88	38.967	Mandrillus_leucophaeus
ENSCPBG00000014327	-	79	40.000	ENSMAUG00000022167	Apobec1	89	40.000	Mesocricetus_auratus
ENSCPBG00000014327	-	81	38.863	ENSMICG00000043645	APOBEC1	83	45.312	Microcebus_murinus
ENSCPBG00000014327	-	80	43.350	ENSMODG00000018004	APOBEC1	86	43.137	Monodelphis_domestica
ENSCPBG00000014327	-	83	37.850	ENSMUSG00000040613	Apobec1	95	39.655	Mus_musculus
ENSCPBG00000014327	-	83	38.318	MGP_PahariEiJ_G0022580	-	95	40.517	Mus_pahari
ENSCPBG00000014327	-	83	37.850	MGP_SPRETEiJ_G0029857	Apobec1	95	39.655	Mus_spretus
ENSCPBG00000014327	-	82	36.967	ENSMPUG00000017532	APOBEC1	89	36.967	Mustela_putorius_furo
ENSCPBG00000014327	-	81	39.048	ENSNGAG00000022607	Apobec1	91	39.048	Nannospalax_galili
ENSCPBG00000014327	-	81	38.967	ENSNLEG00000005342	APOBEC1	79	47.340	Nomascus_leucogenys
ENSCPBG00000014327	-	84	37.963	ENSMEUG00000013406	APOBEC1	91	38.426	Notamacropus_eugenii
ENSCPBG00000014327	-	68	40.331	ENSOPRG00000009508	-	99	40.331	Ochotona_princeps
ENSCPBG00000014327	-	80	37.321	ENSOCUG00000025736	APOBEC1	84	34.934	Oryctolagus_cuniculus
ENSCPBG00000014327	-	78	43.750	ENSOGAG00000026415	APOBEC1	89	37.559	Otolemur_garnettii
ENSCPBG00000014327	-	82	39.336	ENSOARG00000002072	APOBEC1	87	39.336	Ovis_aries
ENSCPBG00000014327	-	82	38.967	ENSPPAG00000027657	APOBEC1	89	38.028	Pan_paniscus
ENSCPBG00000014327	-	82	39.336	ENSPPRG00000012182	APOBEC1	87	43.961	Panthera_pardus
ENSCPBG00000014327	-	82	39.336	ENSPTIG00000020280	APOBEC1	87	43.961	Panthera_tigris_altaica
ENSCPBG00000014327	-	81	39.906	ENSPTRG00000004614	APOBEC1	88	38.967	Pan_troglodytes
ENSCPBG00000014327	-	81	38.967	ENSPANG00000021027	APOBEC1	88	38.967	Papio_anubis
ENSCPBG00000014327	-	65	82.184	ENSPSIG00000012568	-	75	82.184	Pelodiscus_sinensis
ENSCPBG00000014327	-	51	62.745	ENSPSIG00000012791	-	70	78.431	Pelodiscus_sinensis
ENSCPBG00000014327	-	86	38.914	ENSPEMG00000023841	Apobec1	95	38.914	Peromyscus_maniculatus_bairdii
ENSCPBG00000014327	-	84	40.376	ENSPCIG00000023973	APOBEC1	89	42.925	Phascolarctos_cinereus
ENSCPBG00000014327	-	86	38.667	ENSPPYG00000004228	APOBEC1	90	37.719	Pongo_abelii
ENSCPBG00000014327	-	72	36.957	ENSPCAG00000008733	APOBEC1	97	36.957	Procavia_capensis
ENSCPBG00000014327	-	70	46.809	ENSPCOG00000013957	APOBEC1	82	46.809	Propithecus_coquereli
ENSCPBG00000014327	-	55	37.324	ENSPVAG00000010709	APOBEC1	61	37.324	Pteropus_vampyrus
ENSCPBG00000014327	-	83	36.449	ENSRNOG00000015411	Apobec1	93	36.449	Rattus_norvegicus
ENSCPBG00000014327	-	81	39.151	ENSRBIG00000031161	APOBEC1	88	39.151	Rhinopithecus_bieti
ENSCPBG00000014327	-	81	39.151	ENSRROG00000033576	APOBEC1	87	47.619	Rhinopithecus_roxellana
ENSCPBG00000014327	-	62	48.795	ENSSBOG00000030587	APOBEC1	93	48.795	Saimiri_boliviensis_boliviensis
ENSCPBG00000014327	-	76	45.813	ENSSHAG00000008925	APOBEC1	88	45.813	Sarcophilus_harrisii
ENSCPBG00000014327	-	50	42.636	ENSSARG00000011972	-	95	48.413	Sorex_araneus
ENSCPBG00000014327	-	65	45.349	ENSSARG00000000032	-	99	45.349	Sorex_araneus
ENSCPBG00000014327	-	85	43.439	ENSSPUG00000009044	-	85	43.439	Sphenodon_punctatus
ENSCPBG00000014327	-	82	39.336	ENSSSCG00000000668	APOBEC1	89	39.336	Sus_scrofa
ENSCPBG00000014327	-	57	46.528	ENSTGUG00000013118	-	99	46.528	Taeniopygia_guttata
ENSCPBG00000014327	-	72	44.271	ENSTBEG00000010043	APOBEC1	80	44.271	Tupaia_belangeri
ENSCPBG00000014327	-	68	43.094	ENSTTRG00000014015	APOBEC1	96	43.094	Tursiops_truncatus
ENSCPBG00000014327	-	85	37.273	ENSUAMG00000011636	APOBEC1	89	37.273	Ursus_americanus
ENSCPBG00000014327	-	85	37.273	ENSUMAG00000016552	APOBEC1	89	37.273	Ursus_maritimus
ENSCPBG00000014327	-	82	37.441	ENSVPAG00000001343	APOBEC1	89	37.441	Vicugna_pacos
ENSCPBG00000014327	-	77	45.894	ENSVVUG00000010522	APOBEC1	87	45.894	Vulpes_vulpes