EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014328 (Gene tree)
Gene ID: 101948401
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 6321 bases
Position: chrKK083081.1:1969771-1976091
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019908	APOBEC_N	PF08210.11	1e-32	1	1
ENSCPBP00000019908	APOBEC_C	PF05240.14	7.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023426	-	1333	XM_024110175	ENSCPBP00000019908	228 (aa)	XP_023965943	UPI000388D92C

Gene Model

Click here to download ENSCPBG00000014328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014328	-	81	49.457	ENSCPBG00000014331	-	76	49.457
ENSCPBG00000014328	-	57	35.821	ENSCPBG00000014337	AICDA	67	35.821
ENSCPBG00000014328	-	97	45.701	ENSCPBG00000014335	-	89	45.701
ENSCPBG00000014328	-	74	81.065	ENSCPBG00000017398	-	74	81.065
ENSCPBG00000014328	-	85	56.701	ENSCPBG00000014329	-	53	56.701
ENSCPBG00000014328	-	93	83.886	ENSCPBG00000014327	-	79	83.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014328	-	82	46.809	ENSG00000111701	APOBEC1	79	46.809	Homo_sapiens
ENSCPBG00000014328	-	92	45.498	ENSAMEG00000007098	APOBEC1	86	45.498	Ailuropoda_melanoleuca
ENSCPBG00000014328	-	79	45.304	ENSACAG00000028578	-	98	45.304	Anolis_carolinensis
ENSCPBG00000014328	-	86	45.960	ENSANAG00000027743	APOBEC1	79	45.960	Aotus_nancymaae
ENSCPBG00000014328	-	86	43.939	ENSBTAG00000014683	APOBEC1	83	43.939	Bos_taurus
ENSCPBG00000014328	-	84	47.917	ENSCJAG00000005398	APOBEC1	86	47.917	Callithrix_jacchus
ENSCPBG00000014328	-	86	47.475	ENSCAFG00000013901	APOBEC1	83	47.475	Canis_familiaris
ENSCPBG00000014328	-	89	46.798	ENSCAFG00020003511	APOBEC1	83	46.798	Canis_lupus_dingo
ENSCPBG00000014328	-	86	44.949	ENSCHIG00000011898	APOBEC1	86	42.574	Capra_hircus
ENSCPBG00000014328	-	52	52.941	ENSTSYG00000029141	APOBEC1	84	52.941	Carlito_syrichta
ENSCPBG00000014328	-	83	45.550	ENSCAPG00000015882	-	88	45.550	Cavia_aperea
ENSCPBG00000014328	-	88	43.500	ENSCPOG00000033068	APOBEC1	83	43.500	Cavia_porcellus
ENSCPBG00000014328	-	84	48.438	ENSCCAG00000022258	APOBEC1	81	48.438	Cebus_capucinus
ENSCPBG00000014328	-	82	47.340	ENSCATG00000021613	APOBEC1	75	47.340	Cercocebus_atys
ENSCPBG00000014328	-	84	45.833	ENSCLAG00000014645	APOBEC1	83	45.833	Chinchilla_lanigera
ENSCPBG00000014328	-	73	45.238	ENSCSAG00000009817	APOBEC1	87	45.238	Chlorocebus_sabaeus
ENSCPBG00000014328	-	82	47.340	ENSCANG00000038359	APOBEC1	81	47.340	Colobus_angolensis_palliatus
ENSCPBG00000014328	-	89	43.137	ENSCGRG00001011130	Apobec1	88	43.137	Cricetulus_griseus_chok1gshd
ENSCPBG00000014328	-	89	43.137	ENSCGRG00000008644	Apobec1	88	43.137	Cricetulus_griseus_crigri
ENSCPBG00000014328	-	92	44.550	ENSDNOG00000010926	APOBEC1	86	44.550	Dasypus_novemcinctus
ENSCPBG00000014328	-	87	43.000	ENSDORG00000023717	Apobec1	92	43.000	Dipodomys_ordii
ENSCPBG00000014328	-	86	47.449	ENSETEG00000004867	APOBEC1	80	47.449	Echinops_telfairi
ENSCPBG00000014328	-	94	42.130	ENSEASG00005015951	APOBEC1	90	42.130	Equus_asinus_asinus
ENSCPBG00000014328	-	73	45.238	ENSECAG00000017163	APOBEC1	87	45.238	Equus_caballus
ENSCPBG00000014328	-	54	46.341	ENSEEUG00000007530	-	58	46.341	Erinaceus_europaeus
ENSCPBG00000014328	-	84	43.750	ENSEEUG00000009112	-	84	43.750	Erinaceus_europaeus
ENSCPBG00000014328	-	86	44.949	ENSFCAG00000009350	APOBEC1	83	44.949	Felis_catus
ENSCPBG00000014328	-	84	48.529	ENSFALG00000007257	-	85	48.529	Ficedula_albicollis
ENSCPBG00000014328	-	81	45.699	ENSFDAG00000018470	APOBEC1	88	45.699	Fukomys_damarensis
ENSCPBG00000014328	-	91	49.282	ENSGAGG00000011837	-	90	52.419	Gopherus_agassizii
ENSCPBG00000014328	-	78	53.631	ENSGAGG00000004947	-	84	53.631	Gopherus_agassizii
ENSCPBG00000014328	-	76	70.857	ENSGAGG00000021745	-	65	72.571	Gopherus_agassizii
ENSCPBG00000014328	-	81	79.348	ENSGAGG00000006624	-	66	79.348	Gopherus_agassizii
ENSCPBG00000014328	-	99	76.652	ENSGAGG00000021744	-	88	76.652	Gopherus_agassizii
ENSCPBG00000014328	-	86	45.455	ENSHGLG00000001495	APOBEC1	83	45.455	Heterocephalus_glaber_female
ENSCPBG00000014328	-	86	45.455	ENSHGLG00100002187	APOBEC1	83	45.455	Heterocephalus_glaber_male
ENSCPBG00000014328	-	76	40.571	ENSSTOG00000021971	APOBEC1	89	48.864	Ictidomys_tridecemlineatus
ENSCPBG00000014328	-	86	43.147	ENSJJAG00000022108	Apobec1	85	43.147	Jaculus_jaculus
ENSCPBG00000014328	-	80	47.283	ENSLAFG00000030837	APOBEC1	82	47.283	Loxodonta_africana
ENSCPBG00000014328	-	82	47.340	ENSMFAG00000000277	APOBEC1	87	45.833	Macaca_fascicularis
ENSCPBG00000014328	-	82	47.340	ENSMNEG00000029670	APOBEC1	79	47.340	Macaca_nemestrina
ENSCPBG00000014328	-	82	47.340	ENSMLEG00000036301	APOBEC1	79	47.340	Mandrillus_leucophaeus
ENSCPBG00000014328	-	83	44.211	ENSMAUG00000022167	Apobec1	84	44.211	Mesocricetus_auratus
ENSCPBG00000014328	-	85	45.641	ENSMICG00000043645	APOBEC1	83	45.641	Microcebus_murinus
ENSCPBG00000014328	-	84	46.875	ENSMODG00000018004	APOBEC1	80	46.875	Monodelphis_domestica
ENSCPBG00000014328	-	89	42.365	ENSMUSG00000040613	Apobec1	86	45.714	Mus_musculus
ENSCPBG00000014328	-	89	42.365	MGP_PahariEiJ_G0022580	-	86	45.714	Mus_pahari
ENSCPBG00000014328	-	89	42.365	MGP_SPRETEiJ_G0029857	Apobec1	86	45.714	Mus_spretus
ENSCPBG00000014328	-	82	46.277	ENSMPUG00000017532	APOBEC1	79	46.277	Mustela_putorius_furo
ENSCPBG00000014328	-	84	43.750	ENSNGAG00000022607	Apobec1	83	43.750	Nannospalax_galili
ENSCPBG00000014328	-	82	47.340	ENSNLEG00000005342	APOBEC1	79	47.340	Nomascus_leucogenys
ENSCPBG00000014328	-	95	44.240	ENSMEUG00000013406	APOBEC1	89	44.240	Notamacropus_eugenii
ENSCPBG00000014328	-	76	43.103	ENSOPRG00000009508	-	95	43.103	Ochotona_princeps
ENSCPBG00000014328	-	80	46.739	ENSOCUG00000025736	APOBEC1	68	46.739	Oryctolagus_cuniculus
ENSCPBG00000014328	-	90	44.076	ENSOGAG00000026415	APOBEC1	89	44.076	Otolemur_garnettii
ENSCPBG00000014328	-	86	44.949	ENSOARG00000002072	APOBEC1	82	44.949	Ovis_aries
ENSCPBG00000014328	-	82	44.681	ENSPPAG00000027657	APOBEC1	77	44.681	Pan_paniscus
ENSCPBG00000014328	-	86	44.444	ENSPPRG00000012182	APOBEC1	83	44.444	Panthera_pardus
ENSCPBG00000014328	-	86	44.444	ENSPTIG00000020280	APOBEC1	83	44.444	Panthera_tigris_altaica
ENSCPBG00000014328	-	82	47.340	ENSPTRG00000004614	APOBEC1	79	47.340	Pan_troglodytes
ENSCPBG00000014328	-	82	47.340	ENSPANG00000021027	APOBEC1	79	47.340	Papio_anubis
ENSCPBG00000014328	-	56	82.178	ENSPSIG00000012791	-	69	82.178	Pelodiscus_sinensis
ENSCPBG00000014328	-	76	78.736	ENSPSIG00000012568	-	75	78.736	Pelodiscus_sinensis
ENSCPBG00000014328	-	96	42.081	ENSPEMG00000023841	Apobec1	95	42.081	Peromyscus_maniculatus_bairdii
ENSCPBG00000014328	-	94	45.116	ENSPCIG00000023973	APOBEC1	88	45.116	Phascolarctos_cinereus
ENSCPBG00000014328	-	82	47.340	ENSPPYG00000004228	APOBEC1	75	47.340	Pongo_abelii
ENSCPBG00000014328	-	71	48.765	ENSPCAG00000008733	APOBEC1	86	48.765	Procavia_capensis
ENSCPBG00000014328	-	85	45.641	ENSPCOG00000013957	APOBEC1	84	45.641	Propithecus_coquereli
ENSCPBG00000014328	-	52	47.059	ENSPVAG00000010709	APOBEC1	51	47.059	Pteropus_vampyrus
ENSCPBG00000014328	-	89	40.887	ENSRNOG00000015411	Apobec1	88	40.887	Rattus_norvegicus
ENSCPBG00000014328	-	82	47.872	ENSRBIG00000031161	APOBEC1	79	47.872	Rhinopithecus_bieti
ENSCPBG00000014328	-	82	47.872	ENSRROG00000033576	APOBEC1	87	46.429	Rhinopithecus_roxellana
ENSCPBG00000014328	-	73	50.000	ENSSBOG00000030587	APOBEC1	93	50.000	Saimiri_boliviensis_boliviensis
ENSCPBG00000014328	-	92	46.190	ENSSHAG00000008925	APOBEC1	89	46.190	Sarcophilus_harrisii
ENSCPBG00000014328	-	55	50.794	ENSSARG00000011972	-	95	50.794	Sorex_araneus
ENSCPBG00000014328	-	75	47.093	ENSSARG00000000032	-	99	47.093	Sorex_araneus
ENSCPBG00000014328	-	100	43.162	ENSSPUG00000009044	-	90	43.162	Sphenodon_punctatus
ENSCPBG00000014328	-	92	45.238	ENSSSCG00000000668	APOBEC1	86	45.238	Sus_scrofa
ENSCPBG00000014328	-	62	47.887	ENSTGUG00000013118	-	97	47.887	Taeniopygia_guttata
ENSCPBG00000014328	-	84	44.271	ENSTBEG00000010043	APOBEC1	80	44.271	Tupaia_belangeri
ENSCPBG00000014328	-	73	45.783	ENSTTRG00000014015	APOBEC1	88	45.783	Tursiops_truncatus
ENSCPBG00000014328	-	92	45.024	ENSUAMG00000011636	APOBEC1	84	45.024	Ursus_americanus
ENSCPBG00000014328	-	92	45.024	ENSUMAG00000016552	APOBEC1	84	45.024	Ursus_maritimus
ENSCPBG00000014328	-	85	43.077	ENSVPAG00000001343	APOBEC1	81	43.077	Vicugna_pacos
ENSCPBG00000014328	-	86	47.980	ENSVVUG00000010522	APOBEC1	83	47.980	Vulpes_vulpes