EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014329 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 2931 bases
Position: chrKK083081.1:1995403-1998333
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019909	APOBEC_N	PF08210.11	7.7e-26	1	1
ENSCPBP00000019909	APOBEC_C	PF05240.14	6.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023427	-	1229	-	ENSCPBP00000019909	363 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000014329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014329	-	57	54.206	ENSCPBG00000014335	-	85	54.206
ENSCPBG00000014329	-	51	50.000	ENSCPBG00000014331	-	71	57.225
ENSCPBG00000014329	-	53	56.701	ENSCPBG00000014328	-	85	56.701
ENSCPBG00000014329	-	65	44.958	ENSCPBG00000014327	-	92	44.958

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014329	-	54	50.510	ENSG00000111701	APOBEC1	83	50.510	Homo_sapiens
ENSCPBG00000014329	-	53	48.454	ENSAMEG00000007098	APOBEC1	82	48.454	Ailuropoda_melanoleuca
ENSCPBG00000014329	-	54	51.020	ENSANAG00000027743	APOBEC1	79	51.020	Aotus_nancymaae
ENSCPBG00000014329	-	54	45.408	ENSBTAG00000014683	APOBEC1	83	45.408	Bos_taurus
ENSCPBG00000014329	-	60	47.273	ENSCJAG00000005398	APOBEC1	99	47.273	Callithrix_jacchus
ENSCPBG00000014329	-	54	47.959	ENSCAFG00000013901	APOBEC1	83	47.959	Canis_familiaris
ENSCPBG00000014329	-	54	47.959	ENSCAFG00020003511	APOBEC1	82	47.959	Canis_lupus_dingo
ENSCPBG00000014329	-	56	47.291	ENSCHIG00000011898	APOBEC1	83	47.291	Capra_hircus
ENSCPBG00000014329	-	53	44.330	ENSCAPG00000015882	-	90	44.330	Cavia_aperea
ENSCPBG00000014329	-	54	43.147	ENSCPOG00000033068	APOBEC1	83	43.147	Cavia_porcellus
ENSCPBG00000014329	-	61	47.534	ENSCCAG00000022258	APOBEC1	94	47.534	Cebus_capucinus
ENSCPBG00000014329	-	54	50.000	ENSCATG00000021613	APOBEC1	79	50.000	Cercocebus_atys
ENSCPBG00000014329	-	54	45.408	ENSCLAG00000014645	APOBEC1	85	45.408	Chinchilla_lanigera
ENSCPBG00000014329	-	54	50.000	ENSCANG00000038359	APOBEC1	85	50.000	Colobus_angolensis_palliatus
ENSCPBG00000014329	-	54	47.449	ENSCGRG00001011130	Apobec1	85	47.449	Cricetulus_griseus_chok1gshd
ENSCPBG00000014329	-	54	47.449	ENSCGRG00000008644	Apobec1	85	47.449	Cricetulus_griseus_crigri
ENSCPBG00000014329	-	61	45.291	ENSDNOG00000010926	APOBEC1	94	45.291	Dasypus_novemcinctus
ENSCPBG00000014329	-	53	41.451	ENSDORG00000023717	Apobec1	90	41.451	Dipodomys_ordii
ENSCPBG00000014329	-	54	46.193	ENSETEG00000004867	APOBEC1	83	46.193	Echinops_telfairi
ENSCPBG00000014329	-	54	48.469	ENSEASG00005015951	APOBEC1	82	48.469	Equus_asinus_asinus
ENSCPBG00000014329	-	54	46.429	ENSEEUG00000009112	-	87	46.429	Erinaceus_europaeus
ENSCPBG00000014329	-	54	47.959	ENSFCAG00000009350	APOBEC1	83	47.959	Felis_catus
ENSCPBG00000014329	-	50	40.884	ENSFDAG00000018470	APOBEC1	87	40.884	Fukomys_damarensis
ENSCPBG00000014329	-	67	51.639	ENSGAGG00000011837	-	90	61.905	Gopherus_agassizii
ENSCPBG00000014329	-	50	52.174	ENSGAGG00000021745	-	68	52.174	Gopherus_agassizii
ENSCPBG00000014329	-	65	45.000	ENSGAGG00000021744	-	87	45.000	Gopherus_agassizii
ENSCPBG00000014329	-	54	42.132	ENSHGLG00000001495	APOBEC1	83	42.132	Heterocephalus_glaber_female
ENSCPBG00000014329	-	54	42.132	ENSHGLG00100002187	APOBEC1	83	42.132	Heterocephalus_glaber_male
ENSCPBG00000014329	-	55	44.059	ENSJJAG00000022108	Apobec1	88	44.059	Jaculus_jaculus
ENSCPBG00000014329	-	56	47.291	ENSLAFG00000030837	APOBEC1	90	47.291	Loxodonta_africana
ENSCPBG00000014329	-	54	50.000	ENSMFAG00000000277	APOBEC1	85	49.080	Macaca_fascicularis
ENSCPBG00000014329	-	54	50.000	ENSMNEG00000029670	APOBEC1	83	50.000	Macaca_nemestrina
ENSCPBG00000014329	-	54	50.000	ENSMLEG00000036301	APOBEC1	83	50.000	Mandrillus_leucophaeus
ENSCPBG00000014329	-	50	48.634	ENSMAUG00000022167	Apobec1	82	48.634	Mesocricetus_auratus
ENSCPBG00000014329	-	53	47.692	ENSMICG00000043645	APOBEC1	84	47.692	Microcebus_murinus
ENSCPBG00000014329	-	55	50.000	ENSMODG00000018004	APOBEC1	85	50.000	Monodelphis_domestica
ENSCPBG00000014329	-	54	46.429	ENSMUSG00000040613	Apobec1	88	53.000	Mus_musculus
ENSCPBG00000014329	-	54	47.449	MGP_PahariEiJ_G0022580	-	88	54.000	Mus_pahari
ENSCPBG00000014329	-	54	46.429	MGP_SPRETEiJ_G0029857	Apobec1	88	53.000	Mus_spretus
ENSCPBG00000014329	-	54	46.429	ENSMPUG00000017532	APOBEC1	83	46.429	Mustela_putorius_furo
ENSCPBG00000014329	-	54	45.408	ENSNGAG00000022607	Apobec1	85	45.408	Nannospalax_galili
ENSCPBG00000014329	-	54	49.490	ENSNLEG00000005342	APOBEC1	83	49.490	Nomascus_leucogenys
ENSCPBG00000014329	-	54	46.939	ENSMEUG00000013406	APOBEC1	83	46.939	Notamacropus_eugenii
ENSCPBG00000014329	-	56	48.276	ENSOCUG00000025736	APOBEC1	75	48.276	Oryctolagus_cuniculus
ENSCPBG00000014329	-	54	47.449	ENSOGAG00000026415	APOBEC1	83	47.449	Otolemur_garnettii
ENSCPBG00000014329	-	56	47.291	ENSOARG00000002072	APOBEC1	84	47.291	Ovis_aries
ENSCPBG00000014329	-	54	47.449	ENSPPAG00000027657	APOBEC1	81	47.449	Pan_paniscus
ENSCPBG00000014329	-	54	47.449	ENSPPRG00000012182	APOBEC1	83	47.449	Panthera_pardus
ENSCPBG00000014329	-	54	47.449	ENSPTIG00000020280	APOBEC1	83	47.449	Panthera_tigris_altaica
ENSCPBG00000014329	-	54	51.020	ENSPTRG00000004614	APOBEC1	83	51.020	Pan_troglodytes
ENSCPBG00000014329	-	54	50.000	ENSPANG00000021027	APOBEC1	83	50.000	Papio_anubis
ENSCPBG00000014329	-	54	44.898	ENSPEMG00000023841	Apobec1	85	44.898	Peromyscus_maniculatus_bairdii
ENSCPBG00000014329	-	54	50.510	ENSPCIG00000023973	APOBEC1	83	50.510	Phascolarctos_cinereus
ENSCPBG00000014329	-	54	50.000	ENSPPYG00000004228	APOBEC1	79	50.000	Pongo_abelii
ENSCPBG00000014329	-	55	46.500	ENSPCOG00000013957	APOBEC1	88	46.500	Propithecus_coquereli
ENSCPBG00000014329	-	54	45.408	ENSRNOG00000015411	Apobec1	85	45.408	Rattus_norvegicus
ENSCPBG00000014329	-	54	49.490	ENSRBIG00000031161	APOBEC1	83	49.490	Rhinopithecus_bieti
ENSCPBG00000014329	-	54	49.490	ENSRROG00000033576	APOBEC1	85	48.466	Rhinopithecus_roxellana
ENSCPBG00000014329	-	54	48.980	ENSSHAG00000008925	APOBEC1	86	48.980	Sarcophilus_harrisii
ENSCPBG00000014329	-	52	46.597	ENSSPUG00000009044	-	73	46.597	Sphenodon_punctatus
ENSCPBG00000014329	-	53	48.205	ENSSSCG00000000668	APOBEC1	82	48.205	Sus_scrofa
ENSCPBG00000014329	-	53	45.596	ENSTBEG00000010043	APOBEC1	81	45.596	Tupaia_belangeri
ENSCPBG00000014329	-	53	47.692	ENSUAMG00000011636	APOBEC1	80	47.692	Ursus_americanus
ENSCPBG00000014329	-	53	47.692	ENSUMAG00000016552	APOBEC1	80	47.692	Ursus_maritimus
ENSCPBG00000014329	-	54	46.429	ENSVPAG00000001343	APOBEC1	83	46.429	Vicugna_pacos
ENSCPBG00000014329	-	54	47.959	ENSVVUG00000010522	APOBEC1	83	47.959	Vulpes_vulpes