EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014331 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 9764 bases
Position: chrKK083081.1:2035083-2044846
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019915	APOBEC_N	PF08210.11	3.9e-25	1	1
ENSCPBP00000019921	APOBEC_N	PF08210.11	7.1e-25	1	1
ENSCPBP00000019917	APOBEC_N	PF08210.11	1.1e-13	1	1
ENSCPBP00000019919	APOBEC_N	PF08210.11	7.2e-11	1	1
ENSCPBP00000019915	APOBEC_C	PF05240.14	7.8e-18	1	1
ENSCPBP00000019921	APOBEC_C	PF05240.14	8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023439	-	729	-	ENSCPBP00000019921	242 (aa)	-	-
ENSCPBT00000023433	-	684	-	ENSCPBP00000019915	227 (aa)	-	-
ENSCPBT00000023435	-	693	-	ENSCPBP00000019917	230 (aa)	-	-
ENSCPBT00000023437	-	651	-	ENSCPBP00000019919	216 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000014331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014331	-	81	45.128	ENSCPBG00000014327	-	77	45.128
ENSCPBG00000014331	-	76	49.457	ENSCPBG00000014328	-	81	49.457
ENSCPBG00000014331	-	71	57.225	ENSCPBG00000014329	-	51	50.000
ENSCPBG00000014331	-	78	59.259	ENSCPBG00000014335	-	76	59.259
ENSCPBG00000014331	-	61	32.911	ENSCPBG00000014337	AICDA	78	32.911
ENSCPBG00000014331	-	81	44.262	ENSCPBG00000017398	-	76	47.399

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014331	-	90	42.667	ENSG00000111701	APOBEC1	99	41.597	Homo_sapiens
ENSCPBG00000014331	-	94	39.744	ENSAMEG00000007098	APOBEC1	97	39.744	Ailuropoda_melanoleuca
ENSCPBG00000014331	-	75	46.703	ENSACAG00000028578	-	98	46.703	Anolis_carolinensis
ENSCPBG00000014331	-	94	41.277	ENSANAG00000027743	APOBEC1	93	41.277	Aotus_nancymaae
ENSCPBG00000014331	-	94	37.872	ENSBTAG00000014683	APOBEC1	98	37.872	Bos_taurus
ENSCPBG00000014331	-	71	47.674	ENSCJAG00000005398	APOBEC1	77	47.674	Callithrix_jacchus
ENSCPBG00000014331	-	77	47.059	ENSCAFG00000013901	APOBEC1	78	47.059	Canis_familiaris
ENSCPBG00000014331	-	68	50.649	ENSCAFG00020003511	APOBEC1	71	47.093	Canis_lupus_dingo
ENSCPBG00000014331	-	94	37.607	ENSCHIG00000011898	APOBEC1	95	37.607	Capra_hircus
ENSCPBG00000014331	-	57	47.482	ENSTSYG00000029141	APOBEC1	97	47.482	Carlito_syrichta
ENSCPBG00000014331	-	84	38.571	ENSCAPG00000015882	-	96	38.571	Cavia_aperea
ENSCPBG00000014331	-	77	44.385	ENSCPOG00000033068	APOBEC1	78	44.385	Cavia_porcellus
ENSCPBG00000014331	-	90	43.556	ENSCCAG00000022258	APOBEC1	94	43.556	Cebus_capucinus
ENSCPBG00000014331	-	90	42.222	ENSCATG00000021613	APOBEC1	89	42.222	Cercocebus_atys
ENSCPBG00000014331	-	77	45.989	ENSCLAG00000014645	APOBEC1	80	45.989	Chinchilla_lanigera
ENSCPBG00000014331	-	76	41.053	ENSCSAG00000009817	APOBEC1	98	41.053	Chlorocebus_sabaeus
ENSCPBG00000014331	-	88	42.273	ENSCANG00000038359	APOBEC1	94	42.273	Colobus_angolensis_palliatus
ENSCPBG00000014331	-	90	41.593	ENSCGRG00001011130	Apobec1	97	41.593	Cricetulus_griseus_chok1gshd
ENSCPBG00000014331	-	90	41.593	ENSCGRG00000008644	Apobec1	97	41.593	Cricetulus_griseus_crigri
ENSCPBG00000014331	-	77	48.128	ENSDNOG00000010926	APOBEC1	78	48.128	Dasypus_novemcinctus
ENSCPBG00000014331	-	70	42.405	ENSDORG00000023717	Apobec1	78	42.262	Dipodomys_ordii
ENSCPBG00000014331	-	88	43.891	ENSETEG00000004867	APOBEC1	92	43.891	Echinops_telfairi
ENSCPBG00000014331	-	94	38.889	ENSEASG00005015951	APOBEC1	97	38.889	Equus_asinus_asinus
ENSCPBG00000014331	-	76	39.474	ENSECAG00000017163	APOBEC1	98	39.474	Equus_caballus
ENSCPBG00000014331	-	53	48.837	ENSEEUG00000007530	-	61	48.837	Erinaceus_europaeus
ENSCPBG00000014331	-	70	48.428	ENSEEUG00000009112	-	74	47.929	Erinaceus_europaeus
ENSCPBG00000014331	-	94	40.426	ENSFCAG00000009350	APOBEC1	98	40.426	Felis_catus
ENSCPBG00000014331	-	78	48.276	ENSFALG00000007257	-	74	62.838	Ficedula_albicollis
ENSCPBG00000014331	-	67	42.484	ENSFDAG00000018470	APOBEC1	74	43.871	Fukomys_damarensis
ENSCPBG00000014331	-	71	47.093	ENSGAGG00000021744	-	67	47.093	Gopherus_agassizii
ENSCPBG00000014331	-	75	51.366	ENSGAGG00000004947	-	90	51.366	Gopherus_agassizii
ENSCPBG00000014331	-	81	43.716	ENSGAGG00000006624	-	68	45.263	Gopherus_agassizii
ENSCPBG00000014331	-	80	45.355	ENSGAGG00000021745	-	67	48.901	Gopherus_agassizii
ENSCPBG00000014331	-	76	88.889	ENSGAGG00000011837	-	89	88.889	Gopherus_agassizii
ENSCPBG00000014331	-	77	45.989	ENSHGLG00000001495	APOBEC1	78	45.989	Heterocephalus_glaber_female
ENSCPBG00000014331	-	77	45.989	ENSHGLG00100002187	APOBEC1	78	45.989	Heterocephalus_glaber_male
ENSCPBG00000014331	-	65	42.177	ENSSTOG00000021971	APOBEC1	98	47.423	Ictidomys_tridecemlineatus
ENSCPBG00000014331	-	76	45.355	ENSJJAG00000022108	Apobec1	79	45.355	Jaculus_jaculus
ENSCPBG00000014331	-	88	41.364	ENSLAFG00000030837	APOBEC1	97	41.364	Loxodonta_africana
ENSCPBG00000014331	-	90	42.222	ENSMFAG00000000277	APOBEC1	94	42.222	Macaca_fascicularis
ENSCPBG00000014331	-	90	42.222	ENSMNEG00000029670	APOBEC1	94	42.222	Macaca_nemestrina
ENSCPBG00000014331	-	90	42.222	ENSMLEG00000036301	APOBEC1	94	42.222	Mandrillus_leucophaeus
ENSCPBG00000014331	-	84	43.128	ENSMAUG00000022167	Apobec1	94	43.128	Mesocricetus_auratus
ENSCPBG00000014331	-	90	38.222	ENSMICG00000043645	APOBEC1	94	38.222	Microcebus_murinus
ENSCPBG00000014331	-	77	47.594	ENSMODG00000018004	APOBEC1	78	47.594	Monodelphis_domestica
ENSCPBG00000014331	-	84	42.857	ENSMUSG00000040613	Apobec1	86	48.571	Mus_musculus
ENSCPBG00000014331	-	84	42.857	MGP_PahariEiJ_G0022580	-	86	48.571	Mus_pahari
ENSCPBG00000014331	-	84	42.857	MGP_SPRETEiJ_G0029857	Apobec1	86	48.571	Mus_spretus
ENSCPBG00000014331	-	94	39.574	ENSMPUG00000017532	APOBEC1	98	39.574	Mustela_putorius_furo
ENSCPBG00000014331	-	76	45.652	ENSNGAG00000022607	Apobec1	79	45.652	Nannospalax_galili
ENSCPBG00000014331	-	90	42.222	ENSNLEG00000005342	APOBEC1	94	42.222	Nomascus_leucogenys
ENSCPBG00000014331	-	77	45.455	ENSMEUG00000013406	APOBEC1	78	45.455	Notamacropus_eugenii
ENSCPBG00000014331	-	72	48.193	ENSOPRG00000009508	-	94	47.126	Ochotona_princeps
ENSCPBG00000014331	-	70	46.203	ENSOCUG00000025736	APOBEC1	62	45.238	Oryctolagus_cuniculus
ENSCPBG00000014331	-	90	41.518	ENSOGAG00000026415	APOBEC1	93	41.518	Otolemur_garnettii
ENSCPBG00000014331	-	76	45.355	ENSOARG00000002072	APOBEC1	75	45.355	Ovis_aries
ENSCPBG00000014331	-	90	41.071	ENSPPAG00000027657	APOBEC1	93	41.071	Pan_paniscus
ENSCPBG00000014331	-	94	40.426	ENSPPRG00000012182	APOBEC1	98	40.426	Panthera_pardus
ENSCPBG00000014331	-	94	40.426	ENSPTIG00000020280	APOBEC1	98	40.426	Panthera_tigris_altaica
ENSCPBG00000014331	-	90	42.667	ENSPTRG00000004614	APOBEC1	99	41.597	Pan_troglodytes
ENSCPBG00000014331	-	90	42.222	ENSPANG00000021027	APOBEC1	94	42.222	Papio_anubis
ENSCPBG00000014331	-	76	44.767	ENSPSIG00000012568	-	77	46.369	Pelodiscus_sinensis
ENSCPBG00000014331	-	55	55.085	ENSPSIG00000012791	-	72	55.200	Pelodiscus_sinensis
ENSCPBG00000014331	-	90	43.231	ENSPEMG00000023841	Apobec1	97	43.231	Peromyscus_maniculatus_bairdii
ENSCPBG00000014331	-	77	45.989	ENSPCIG00000023973	APOBEC1	78	45.989	Phascolarctos_cinereus
ENSCPBG00000014331	-	90	42.667	ENSPPYG00000004228	APOBEC1	89	42.667	Pongo_abelii
ENSCPBG00000014331	-	78	45.652	ENSPCAG00000008733	APOBEC1	98	44.920	Procavia_capensis
ENSCPBG00000014331	-	84	38.571	ENSPCOG00000013957	APOBEC1	92	38.571	Propithecus_coquereli
ENSCPBG00000014331	-	60	45.833	ENSPVAG00000010709	APOBEC1	61	45.833	Pteropus_vampyrus
ENSCPBG00000014331	-	84	39.524	ENSRNOG00000015411	Apobec1	91	39.524	Rattus_norvegicus
ENSCPBG00000014331	-	90	41.333	ENSRBIG00000031161	APOBEC1	94	41.333	Rhinopithecus_bieti
ENSCPBG00000014331	-	90	40.889	ENSRROG00000033576	APOBEC1	94	40.889	Rhinopithecus_roxellana
ENSCPBG00000014331	-	71	47.674	ENSSBOG00000030587	APOBEC1	96	47.674	Saimiri_boliviensis_boliviensis
ENSCPBG00000014331	-	75	45.304	ENSSHAG00000008925	APOBEC1	78	45.304	Sarcophilus_harrisii
ENSCPBG00000014331	-	54	54.098	ENSSARG00000011972	-	99	51.515	Sorex_araneus
ENSCPBG00000014331	-	70	52.532	ENSSARG00000000032	-	99	50.000	Sorex_araneus
ENSCPBG00000014331	-	77	47.340	ENSSPUG00000009044	-	72	47.340	Sphenodon_punctatus
ENSCPBG00000014331	-	94	41.702	ENSSSCG00000000668	APOBEC1	98	41.702	Sus_scrofa
ENSCPBG00000014331	-	60	62.069	ENSTGUG00000013118	-	99	62.069	Taeniopygia_guttata
ENSCPBG00000014331	-	84	40.952	ENSTBEG00000010043	APOBEC1	88	40.952	Tupaia_belangeri
ENSCPBG00000014331	-	76	46.739	ENSTTRG00000014015	APOBEC1	97	46.739	Tursiops_truncatus
ENSCPBG00000014331	-	94	40.598	ENSUAMG00000011636	APOBEC1	94	40.598	Ursus_americanus
ENSCPBG00000014331	-	94	40.851	ENSUMAG00000016552	APOBEC1	94	40.851	Ursus_maritimus
ENSCPBG00000014331	-	94	41.702	ENSVPAG00000001343	APOBEC1	98	41.702	Vicugna_pacos
ENSCPBG00000014331	-	77	47.594	ENSVVUG00000010522	APOBEC1	78	47.594	Vulpes_vulpes