EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014335 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 14316 bases
Position: chrKK083081.1:2066517-2080832
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019922	APOBEC_N	PF08210.11	1e-23	1	1
ENSCPBP00000019922	APOBEC_C	PF05240.14	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023440	-	1702	-	ENSCPBP00000019922	247 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000014335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014335	-	83	42.439	ENSCPBG00000014327	-	86	41.176
ENSCPBG00000014335	-	89	45.701	ENSCPBG00000014328	-	97	45.701
ENSCPBG00000014335	-	85	54.206	ENSCPBG00000014329	-	57	54.206
ENSCPBG00000014335	-	76	59.259	ENSCPBG00000014331	-	78	59.259
ENSCPBG00000014335	-	72	47.753	ENSCPBG00000017398	-	77	47.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014335	-	76	46.524	ENSG00000111701	APOBEC1	78	46.524	Homo_sapiens
ENSCPBG00000014335	-	76	48.663	ENSAMEG00000007098	APOBEC1	78	48.663	Ailuropoda_melanoleuca
ENSCPBG00000014335	-	73	45.856	ENSACAG00000028578	-	98	45.856	Anolis_carolinensis
ENSCPBG00000014335	-	77	47.619	ENSANAG00000027743	APOBEC1	75	47.619	Aotus_nancymaae
ENSCPBG00000014335	-	76	46.524	ENSBTAG00000014683	APOBEC1	78	46.524	Bos_taurus
ENSCPBG00000014335	-	70	49.419	ENSCJAG00000005398	APOBEC1	77	49.419	Callithrix_jacchus
ENSCPBG00000014335	-	76	49.198	ENSCAFG00000013901	APOBEC1	78	49.198	Canis_familiaris
ENSCPBG00000014335	-	70	51.744	ENSCAFG00020003511	APOBEC1	71	51.744	Canis_lupus_dingo
ENSCPBG00000014335	-	77	48.421	ENSCHIG00000011898	APOBEC1	78	48.421	Capra_hircus
ENSCPBG00000014335	-	53	52.672	ENSTSYG00000029141	APOBEC1	92	52.672	Carlito_syrichta
ENSCPBG00000014335	-	70	48.837	ENSCAPG00000015882	-	79	48.837	Cavia_aperea
ENSCPBG00000014335	-	76	46.524	ENSCPOG00000033068	APOBEC1	78	46.524	Cavia_porcellus
ENSCPBG00000014335	-	76	47.059	ENSCCAG00000022258	APOBEC1	78	47.059	Cebus_capucinus
ENSCPBG00000014335	-	77	46.561	ENSCATG00000021613	APOBEC1	75	46.561	Cercocebus_atys
ENSCPBG00000014335	-	76	45.989	ENSCLAG00000014645	APOBEC1	80	45.989	Chinchilla_lanigera
ENSCPBG00000014335	-	57	48.592	ENSCSAG00000009817	APOBEC1	73	48.592	Chlorocebus_sabaeus
ENSCPBG00000014335	-	74	47.826	ENSCANG00000038359	APOBEC1	77	47.826	Colobus_angolensis_palliatus
ENSCPBG00000014335	-	76	49.198	ENSCGRG00001011130	Apobec1	81	49.198	Cricetulus_griseus_chok1gshd
ENSCPBG00000014335	-	76	49.198	ENSCGRG00000008644	Apobec1	81	49.198	Cricetulus_griseus_crigri
ENSCPBG00000014335	-	76	49.733	ENSDNOG00000010926	APOBEC1	78	49.733	Dasypus_novemcinctus
ENSCPBG00000014335	-	71	46.286	ENSDORG00000023717	Apobec1	81	46.286	Dipodomys_ordii
ENSCPBG00000014335	-	76	50.532	ENSETEG00000004867	APOBEC1	79	50.532	Echinops_telfairi
ENSCPBG00000014335	-	77	50.000	ENSEASG00005015951	APOBEC1	79	50.000	Equus_asinus_asinus
ENSCPBG00000014335	-	57	50.000	ENSECAG00000017163	APOBEC1	73	50.000	Equus_caballus
ENSCPBG00000014335	-	53	50.769	ENSEEUG00000007530	-	61	50.769	Erinaceus_europaeus
ENSCPBG00000014335	-	70	48.276	ENSEEUG00000009112	-	76	48.276	Erinaceus_europaeus
ENSCPBG00000014335	-	76	48.663	ENSFCAG00000009350	APOBEC1	78	48.663	Felis_catus
ENSCPBG00000014335	-	60	51.701	ENSFALG00000007257	-	74	51.701	Ficedula_albicollis
ENSCPBG00000014335	-	65	43.125	ENSFDAG00000018470	APOBEC1	76	43.125	Fukomys_damarensis
ENSCPBG00000014335	-	91	41.964	ENSGAGG00000021744	-	87	41.964	Gopherus_agassizii
ENSCPBG00000014335	-	71	46.893	ENSGAGG00000021745	-	65	48.023	Gopherus_agassizii
ENSCPBG00000014335	-	76	52.660	ENSGAGG00000004947	-	93	52.660	Gopherus_agassizii
ENSCPBG00000014335	-	77	89.175	ENSGAGG00000011837	-	88	93.567	Gopherus_agassizii
ENSCPBG00000014335	-	75	48.387	ENSGAGG00000006624	-	67	48.387	Gopherus_agassizii
ENSCPBG00000014335	-	76	44.920	ENSHGLG00000001495	APOBEC1	78	44.920	Heterocephalus_glaber_female
ENSCPBG00000014335	-	76	44.920	ENSHGLG00100002187	APOBEC1	78	44.920	Heterocephalus_glaber_male
ENSCPBG00000014335	-	56	48.201	ENSSTOG00000021971	APOBEC1	98	48.454	Ictidomys_tridecemlineatus
ENSCPBG00000014335	-	82	44.828	ENSJJAG00000022108	Apobec1	85	44.828	Jaculus_jaculus
ENSCPBG00000014335	-	70	50.000	ENSLAFG00000030837	APOBEC1	77	50.000	Loxodonta_africana
ENSCPBG00000014335	-	76	46.524	ENSMFAG00000000277	APOBEC1	78	46.524	Macaca_fascicularis
ENSCPBG00000014335	-	76	45.989	ENSMNEG00000029670	APOBEC1	78	45.989	Macaca_nemestrina
ENSCPBG00000014335	-	76	46.524	ENSMLEG00000036301	APOBEC1	78	46.524	Mandrillus_leucophaeus
ENSCPBG00000014335	-	70	50.289	ENSMAUG00000022167	Apobec1	77	50.289	Mesocricetus_auratus
ENSCPBG00000014335	-	76	42.781	ENSMICG00000043645	APOBEC1	78	42.781	Microcebus_murinus
ENSCPBG00000014335	-	76	49.198	ENSMODG00000018004	APOBEC1	78	49.198	Monodelphis_domestica
ENSCPBG00000014335	-	76	49.733	ENSMUSG00000040613	Apobec1	98	49.167	Mus_musculus
ENSCPBG00000014335	-	76	50.267	MGP_PahariEiJ_G0022580	-	98	50.000	Mus_pahari
ENSCPBG00000014335	-	76	49.733	MGP_SPRETEiJ_G0029857	Apobec1	98	49.167	Mus_spretus
ENSCPBG00000014335	-	76	45.455	ENSMPUG00000017532	APOBEC1	78	45.455	Mustela_putorius_furo
ENSCPBG00000014335	-	76	47.594	ENSNGAG00000022607	Apobec1	81	47.594	Nannospalax_galili
ENSCPBG00000014335	-	76	45.989	ENSNLEG00000005342	APOBEC1	78	45.989	Nomascus_leucogenys
ENSCPBG00000014335	-	76	47.059	ENSMEUG00000013406	APOBEC1	78	47.059	Notamacropus_eugenii
ENSCPBG00000014335	-	70	48.256	ENSOPRG00000009508	-	94	48.256	Ochotona_princeps
ENSCPBG00000014335	-	77	46.561	ENSOCUG00000025736	APOBEC1	70	46.561	Oryctolagus_cuniculus
ENSCPBG00000014335	-	74	45.109	ENSOGAG00000026415	APOBEC1	77	45.109	Otolemur_garnettii
ENSCPBG00000014335	-	76	48.128	ENSOARG00000002072	APOBEC1	77	48.128	Ovis_aries
ENSCPBG00000014335	-	76	45.455	ENSPPAG00000027657	APOBEC1	77	45.455	Pan_paniscus
ENSCPBG00000014335	-	76	48.128	ENSPPRG00000012182	APOBEC1	78	48.128	Panthera_pardus
ENSCPBG00000014335	-	76	48.128	ENSPTIG00000020280	APOBEC1	78	48.128	Panthera_tigris_altaica
ENSCPBG00000014335	-	76	47.059	ENSPTRG00000004614	APOBEC1	78	47.059	Pan_troglodytes
ENSCPBG00000014335	-	76	46.524	ENSPANG00000021027	APOBEC1	78	46.524	Papio_anubis
ENSCPBG00000014335	-	52	52.846	ENSPSIG00000012791	-	69	52.846	Pelodiscus_sinensis
ENSCPBG00000014335	-	71	48.864	ENSPSIG00000012568	-	76	48.864	Pelodiscus_sinensis
ENSCPBG00000014335	-	76	48.128	ENSPEMG00000023841	Apobec1	81	48.128	Peromyscus_maniculatus_bairdii
ENSCPBG00000014335	-	76	48.663	ENSPCIG00000023973	APOBEC1	78	48.663	Phascolarctos_cinereus
ENSCPBG00000014335	-	77	46.561	ENSPPYG00000004228	APOBEC1	75	46.561	Pongo_abelii
ENSCPBG00000014335	-	76	47.594	ENSPCAG00000008733	APOBEC1	99	47.594	Procavia_capensis
ENSCPBG00000014335	-	72	45.198	ENSPCOG00000013957	APOBEC1	77	45.198	Propithecus_coquereli
ENSCPBG00000014335	-	58	47.917	ENSPVAG00000010709	APOBEC1	61	47.917	Pteropus_vampyrus
ENSCPBG00000014335	-	76	47.059	ENSRNOG00000015411	Apobec1	81	47.059	Rattus_norvegicus
ENSCPBG00000014335	-	76	45.989	ENSRBIG00000031161	APOBEC1	78	45.989	Rhinopithecus_bieti
ENSCPBG00000014335	-	76	45.989	ENSRROG00000033576	APOBEC1	78	45.989	Rhinopithecus_roxellana
ENSCPBG00000014335	-	72	49.153	ENSSBOG00000030587	APOBEC1	99	49.153	Saimiri_boliviensis_boliviensis
ENSCPBG00000014335	-	72	47.753	ENSSHAG00000008925	APOBEC1	77	47.753	Sarcophilus_harrisii
ENSCPBG00000014335	-	53	50.758	ENSSARG00000011972	-	99	50.758	Sorex_araneus
ENSCPBG00000014335	-	70	48.256	ENSSARG00000000032	-	99	48.256	Sorex_araneus
ENSCPBG00000014335	-	74	54.891	ENSSPUG00000009044	-	71	54.891	Sphenodon_punctatus
ENSCPBG00000014335	-	76	47.594	ENSSSCG00000000668	APOBEC1	78	47.594	Sus_scrofa
ENSCPBG00000014335	-	58	53.472	ENSTGUG00000013118	-	99	53.472	Taeniopygia_guttata
ENSCPBG00000014335	-	70	48.837	ENSTBEG00000010043	APOBEC1	72	48.837	Tupaia_belangeri
ENSCPBG00000014335	-	76	47.594	ENSTTRG00000014015	APOBEC1	99	47.594	Tursiops_truncatus
ENSCPBG00000014335	-	76	48.128	ENSUAMG00000011636	APOBEC1	76	48.128	Ursus_americanus
ENSCPBG00000014335	-	76	48.128	ENSUMAG00000016552	APOBEC1	76	48.128	Ursus_maritimus
ENSCPBG00000014335	-	75	46.774	ENSVPAG00000001343	APOBEC1	78	46.774	Vicugna_pacos
ENSCPBG00000014335	-	76	48.663	ENSVVUG00000010522	APOBEC1	78	48.663	Vulpes_vulpes