EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014340 (Gene tree)
Gene ID: 101948530
Gene Symbol: RAB41
Alias: -
Full Name: RAB41%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 20946 bases
Position: chr8:14429133-14450078
Accession: 18293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000019938	MMR_HSR1	PF01926.23	6.5e-05	1	1
ENSCPBP00000019934	MMR_HSR1	PF01926.23	0.00013	1	1
ENSCPBP00000019932	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000023457	RAB41-204	851	-	ENSCPBP00000019938	211 (aa)	XP_005284565	UPI000388A5BB
ENSCPBT00000023454	RAB41-203	1057	-	ENSCPBP00000019935	230 (aa)	-	-
ENSCPBT00000023453	RAB41-202	1215	-	ENSCPBP00000019934	211 (aa)	XP_005284562	UPI000388EA22
ENSCPBT00000023451	RAB41-201	2496	-	ENSCPBP00000019932	275 (aa)	-	UPI000388C32A

Gene Model

Click here to download ENSCPBG00000014340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014340	RAB41	74	42.675	ENSCPBG00000016907	RAB15	74	42.675
ENSCPBG00000014340	RAB41	76	35.404	ENSCPBG00000017056	-	72	36.943
ENSCPBG00000014340	RAB41	86	39.227	ENSCPBG00000023254	RAB2A	83	39.227
ENSCPBG00000014340	RAB41	98	91.262	ENSCPBG00000000041	RAB6A	99	91.262
ENSCPBG00000014340	RAB41	83	33.889	ENSCPBG00000018286	RHEB	96	33.889
ENSCPBG00000014340	RAB41	94	37.019	ENSCPBG00000027605	RAB33B	91	37.019
ENSCPBG00000014340	RAB41	98	91.748	ENSCPBG00000021406	RAB6B	99	91.748
ENSCPBG00000014340	RAB41	76	43.478	ENSCPBG00000006855	RAB30	79	43.478
ENSCPBG00000014340	RAB41	87	33.854	ENSCPBG00000016033	RAB9A	89	32.195
ENSCPBG00000014340	RAB41	79	39.766	ENSCPBG00000015839	-	83	39.766
ENSCPBG00000014340	RAB41	74	32.278	ENSCPBG00000013941	-	83	32.911
ENSCPBG00000014340	RAB41	60	36.719	ENSCPBG00000018802	-	87	36.719
ENSCPBG00000014340	RAB41	92	33.166	ENSCPBG00000011914	RAB19	93	33.166
ENSCPBG00000014340	RAB41	68	32.414	ENSCPBG00000005866	RAB20	60	32.414
ENSCPBG00000014340	RAB41	75	40.252	ENSCPBG00000028375	RAB12	65	40.252
ENSCPBG00000014340	RAB41	69	39.726	ENSCPBG00000022640	RAB23	66	40.506
ENSCPBG00000014340	RAB41	73	39.610	ENSCPBG00000012631	RAB35	76	39.610
ENSCPBG00000014340	RAB41	74	33.544	ENSCPBG00000015094	-	84	34.177
ENSCPBG00000014340	RAB41	74	40.252	ENSCPBG00000001057	RAB39B	75	40.252
ENSCPBG00000014340	RAB41	81	32.584	ENSCPBG00000001542	RAB9B	79	35.404
ENSCPBG00000014340	RAB41	93	39.623	ENSCPBG00000011236	-	97	39.623
ENSCPBG00000014340	RAB41	92	35.714	ENSCPBG00000009941	RAB14	95	35.714
ENSCPBG00000014340	RAB41	74	36.943	ENSCPBG00000014614	RAB11A	73	36.943
ENSCPBG00000014340	RAB41	74	33.544	ENSCPBG00000016544	NRAS	83	34.177
ENSCPBG00000014340	RAB41	92	37.000	ENSCPBG00000014343	RAB7A	96	37.000
ENSCPBG00000014340	RAB41	77	39.394	ENSCPBG00000002289	RAB36	53	39.394
ENSCPBG00000014340	RAB41	75	33.750	ENSCPBG00000013681	MRAS	84	32.584
ENSCPBG00000014340	RAB41	89	36.410	ENSCPBG00000012691	RAB2B	87	36.410
ENSCPBG00000014340	RAB41	98	31.280	ENSCPBG00000022721	RRAS2	97	33.503
ENSCPBG00000014340	RAB41	73	36.306	ENSCPBG00000028244	RERG	77	36.306
ENSCPBG00000014340	RAB41	91	35.751	ENSCPBG00000022446	RAB1B	96	35.751
ENSCPBG00000014340	RAB41	80	37.356	ENSCPBG00000012042	RAB33A	69	37.356
ENSCPBG00000014340	RAB41	75	41.615	ENSCPBG00000020275	RAB34	62	42.236
ENSCPBG00000014340	RAB41	74	42.138	ENSCPBG00000011245	RAB42	80	41.401
ENSCPBG00000014340	RAB41	74	32.911	ENSCPBG00000009289	-	98	31.016
ENSCPBG00000014340	RAB41	91	37.186	ENSCPBG00000013243	RAB1A	95	37.186
ENSCPBG00000014340	RAB41	93	37.245	ENSCPBG00000023927	RAB22A	98	37.245
ENSCPBG00000014340	RAB41	77	31.034	ENSCPBG00000022583	NKIRAS1	87	31.034
ENSCPBG00000014340	RAB41	73	30.719	ENSCPBG00000011715	-	66	32.680
ENSCPBG00000014340	RAB41	97	40.476	ENSCPBG00000022559	RAB5A	95	40.476
ENSCPBG00000014340	RAB41	78	41.667	ENSCPBG00000027619	-	83	41.667
ENSCPBG00000014340	RAB41	74	39.490	ENSCPBG00000025817	RAB25	74	39.490
ENSCPBG00000014340	RAB41	73	35.948	ENSCPBG00000025819	-	98	31.683
ENSCPBG00000014340	RAB41	84	42.938	ENSCPBG00000012712	RAB5B	82	42.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014340	RAB41	100	96.209	ENSACIG00000010914	RAB41	100	96.209	Amphilophus_citrinellus
ENSCPBG00000014340	RAB41	100	96.209	ENSAOCG00000022426	RAB41	100	96.209	Amphiprion_ocellaris
ENSCPBG00000014340	RAB41	100	92.891	ENSAPEG00000007931	RAB41	100	92.891	Amphiprion_percula
ENSCPBG00000014340	RAB41	94	70.707	ENSTSYG00000000768	RAB41	87	70.707	Carlito_syrichta
ENSCPBG00000014340	RAB41	99	63.721	ENSCATG00000037380	RAB41	95	63.721	Cercocebus_atys
ENSCPBG00000014340	RAB41	100	92.891	ENSFHEG00000015996	RAB41	100	92.891	Fundulus_heteroclitus
ENSCPBG00000014340	RAB41	100	96.209	ENSHBUG00000014338	RAB41	100	96.209	Haplochromis_burtoni
ENSCPBG00000014340	RAB41	100	96.209	ENSLBEG00000008746	RAB41	100	96.209	Labrus_bergylta
ENSCPBG00000014340	RAB41	99	65.116	ENSMFAG00000000762	RAB41	95	65.116	Macaca_fascicularis
ENSCPBG00000014340	RAB41	99	65.116	ENSMMUG00000013937	RAB41	95	65.116	Macaca_mulatta
ENSCPBG00000014340	RAB41	99	64.651	ENSMNEG00000045569	RAB41	95	64.651	Macaca_nemestrina
ENSCPBG00000014340	RAB41	91	67.358	ENSMLEG00000038149	RAB41	86	67.358	Mandrillus_leucophaeus
ENSCPBG00000014340	RAB41	100	95.755	ENSONIG00000002774	RAB41	100	95.755	Oreochromis_niloticus
ENSCPBG00000014340	RAB41	100	95.261	ENSORLG00000027669	RAB41	100	95.261	Oryzias_latipes
ENSCPBG00000014340	RAB41	100	91.943	ENSORLG00015010161	RAB41	100	91.943	Oryzias_latipes_hsok
ENSCPBG00000014340	RAB41	96	97.537	ENSOMEG00000017258	RAB41	100	95.261	Oryzias_melastigma
ENSCPBG00000014340	RAB41	99	64.651	ENSPANG00000007317	RAB41	95	64.651	Papio_anubis
ENSCPBG00000014340	RAB41	100	95.261	ENSPKIG00000014618	-	100	95.261	Paramormyrops_kingsleyae
ENSCPBG00000014340	RAB41	100	96.209	ENSPMGG00000017830	RAB41	100	96.209	Periophthalmus_magnuspinnatus
ENSCPBG00000014340	RAB41	100	96.209	ENSPFOG00000011424	RAB41	100	96.209	Poecilia_formosa
ENSCPBG00000014340	RAB41	100	96.209	ENSPREG00000009535	RAB41	100	96.209	Poecilia_reticulata
ENSCPBG00000014340	RAB41	99	65.116	ENSRBIG00000027991	RAB41	95	65.116	Rhinopithecus_bieti
ENSCPBG00000014340	RAB41	97	99.512	ENSSFOG00015011268	RAB41	98	99.512	Scleropages_formosus
ENSCPBG00000014340	RAB41	100	94.393	ENSTNIG00000016831	RAB41	100	94.393	Tetraodon_nigroviridis
ENSCPBG00000014340	RAB41	100	98.104	ENSXETG00000030938	rab41	99	98.104	Xenopus_tropicalis
ENSCPBG00000014340	RAB41	100	96.209	ENSXCOG00000015802	RAB41	100	96.209	Xiphophorus_couchianus
ENSCPBG00000014340	RAB41	100	96.209	ENSXMAG00000027787	RAB41	100	96.209	Xiphophorus_maculatus