EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014671 (Gene tree)
Gene ID: 101937703
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5661 bases
Position: chrKK083227.1:80727-86387
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000020397	DEAD	PF00270.29	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024004	-	1785	XM_005289317	ENSCPBP00000020397	273 (aa)	XP_005289374	-

Gene Model

Click here to download ENSCPBG00000014671's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG
cpic03015	mRNA surveillance pathway	KEGG
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014671	-	95	35.769	ENSCPBG00000004323	DDX6	53	35.769
ENSCPBG00000014671	-	69	35.263	ENSCPBG00000004702	EIF4A1	50	35.263
ENSCPBG00000014671	-	83	34.649	ENSCPBG00000020967	-	50	34.649
ENSCPBG00000014671	-	93	37.891	ENSCPBG00000000975	EIF4A2	81	37.891
ENSCPBG00000014671	-	100	85.766	ENSCPBG00000011879	DDX39A	63	85.766
ENSCPBG00000014671	-	96	37.023	ENSCPBG00000017801	EIF4A3	73	38.000
ENSCPBG00000014671	-	93	33.206	ENSCPBG00000023607	-	54	33.206
ENSCPBG00000014671	-	92	31.154	ENSCPBG00000012500	DDX49	54	31.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014671	-	100	100.000	ENSG00000198563	DDX39B	95	100.000	Homo_sapiens
ENSCPBG00000014671	-	100	100.000	ENSAMEG00000009508	DDX39B	64	100.000	Ailuropoda_melanoleuca
ENSCPBG00000014671	-	98	96.269	ENSACIG00000004534	ddx39b	62	96.269	Amphilophus_citrinellus
ENSCPBG00000014671	-	100	95.604	ENSATEG00000012366	ddx39b	63	95.604	Anabas_testudineus
ENSCPBG00000014671	-	100	99.270	ENSACAG00000012240	DDX39B	64	99.270	Anolis_carolinensis
ENSCPBG00000014671	-	100	100.000	ENSANAG00000030372	DDX39B	66	100.000	Aotus_nancymaae
ENSCPBG00000014671	-	99	93.382	ENSACLG00000018759	ddx39b	62	93.382	Astatotilapia_calliptera
ENSCPBG00000014671	-	100	95.971	ENSAMXG00000017837	ddx39b	63	95.971	Astyanax_mexicanus
ENSCPBG00000014671	-	100	100.000	ENSBTAG00000014490	DDX39B	64	100.000	Bos_taurus
ENSCPBG00000014671	-	100	100.000	ENSCJAG00000003152	DDX39B	64	100.000	Callithrix_jacchus
ENSCPBG00000014671	-	100	100.000	ENSCAFG00000000509	DDX39B	88	100.000	Canis_familiaris
ENSCPBG00000014671	-	100	100.000	ENSCAFG00020020530	DDX39B	64	100.000	Canis_lupus_dingo
ENSCPBG00000014671	-	100	100.000	ENSCHIG00000004579	DDX39B	64	100.000	Capra_hircus
ENSCPBG00000014671	-	100	83.150	ENSTSYG00000029741	-	66	83.150	Carlito_syrichta
ENSCPBG00000014671	-	100	100.000	ENSTSYG00000010226	-	66	100.000	Carlito_syrichta
ENSCPBG00000014671	-	100	99.634	ENSCAPG00000010066	DDX39B	64	99.634	Cavia_aperea
ENSCPBG00000014671	-	100	99.634	ENSCPOG00000002335	DDX39B	64	99.634	Cavia_porcellus
ENSCPBG00000014671	-	100	100.000	ENSCCAG00000027897	DDX39B	65	100.000	Cebus_capucinus
ENSCPBG00000014671	-	99	92.222	ENSCATG00000043709	DDX39B	64	92.222	Cercocebus_atys
ENSCPBG00000014671	-	100	99.634	ENSCLAG00000014555	DDX39B	64	99.634	Chinchilla_lanigera
ENSCPBG00000014671	-	99	99.630	ENSCSAG00000008517	DDX39B	64	99.630	Chlorocebus_sabaeus
ENSCPBG00000014671	-	100	100.000	ENSCANG00000041217	DDX39B	66	100.000	Colobus_angolensis_palliatus
ENSCPBG00000014671	-	99	81.250	ENSCGRG00001021916	-	65	81.250	Cricetulus_griseus_chok1gshd
ENSCPBG00000014671	-	100	95.971	ENSDARG00000036069	ddx39b	63	95.971	Danio_rerio
ENSCPBG00000014671	-	100	100.000	ENSDNOG00000010215	DDX39B	64	100.000	Dasypus_novemcinctus
ENSCPBG00000014671	-	100	100.000	ENSDORG00000004985	Ddx39b	68	100.000	Dipodomys_ordii
ENSCPBG00000014671	-	80	78.539	ENSETEG00000009649	DDX39B	51	78.539	Echinops_telfairi
ENSCPBG00000014671	-	100	100.000	ENSEASG00005017156	DDX39B	64	100.000	Equus_asinus_asinus
ENSCPBG00000014671	-	100	100.000	ENSECAG00000007750	DDX39B	64	100.000	Equus_caballus
ENSCPBG00000014671	-	100	95.604	ENSELUG00000017904	ddx39b	63	95.604	Esox_lucius
ENSCPBG00000014671	-	100	100.000	ENSFCAG00000004497	DDX39B	64	100.000	Felis_catus
ENSCPBG00000014671	-	100	99.634	ENSFDAG00000011074	DDX39B	64	99.634	Fukomys_damarensis
ENSCPBG00000014671	-	100	100.000	ENSGAGG00000001300	-	69	100.000	Gopherus_agassizii
ENSCPBG00000014671	-	100	100.000	ENSGGOG00000005989	DDX39B	66	100.000	Gorilla_gorilla
ENSCPBG00000014671	-	100	99.634	ENSHGLG00000019248	DDX39B	64	99.634	Heterocephalus_glaber_female
ENSCPBG00000014671	-	100	99.634	ENSHGLG00100011850	DDX39B	64	99.634	Heterocephalus_glaber_male
ENSCPBG00000014671	-	100	95.604	ENSIPUG00000015733	DDX39B	59	95.604	Ictalurus_punctatus
ENSCPBG00000014671	-	100	99.267	ENSSTOG00000012838	DDX39B	64	99.267	Ictidomys_tridecemlineatus
ENSCPBG00000014671	-	100	99.634	ENSJJAG00000005660	-	64	99.634	Jaculus_jaculus
ENSCPBG00000014671	-	98	79.851	ENSLBEG00000012254	ddx39b	62	79.851	Labrus_bergylta
ENSCPBG00000014671	-	100	99.634	ENSLACG00000002110	DDX39B	63	99.634	Latimeria_chalumnae
ENSCPBG00000014671	-	100	99.634	ENSLAFG00000014202	DDX39B	64	99.634	Loxodonta_africana
ENSCPBG00000014671	-	100	100.000	ENSMFAG00000034233	DDX39B	66	100.000	Macaca_fascicularis
ENSCPBG00000014671	-	100	100.000	ENSMMUG00000008839	DDX39B	66	100.000	Macaca_mulatta
ENSCPBG00000014671	-	100	100.000	ENSMNEG00000041059	DDX39B	66	100.000	Macaca_nemestrina
ENSCPBG00000014671	-	100	100.000	ENSMLEG00000043791	DDX39B	66	100.000	Mandrillus_leucophaeus
ENSCPBG00000014671	-	99	93.382	ENSMZEG00005017654	ddx39b	62	93.382	Maylandia_zebra
ENSCPBG00000014671	-	100	99.634	ENSMAUG00000008059	Ddx39b	64	99.634	Mesocricetus_auratus
ENSCPBG00000014671	-	100	100.000	ENSMICG00000017349	DDX39B	64	100.000	Microcebus_murinus
ENSCPBG00000014671	-	100	100.000	ENSMOCG00000011169	Ddx39b	64	100.000	Microtus_ochrogaster
ENSCPBG00000014671	-	81	99.548	ENSMODG00000015791	DDX39B	52	99.548	Monodelphis_domestica
ENSCPBG00000014671	-	100	100.000	ENSMUSG00000019432	Ddx39b	64	100.000	Mus_musculus
ENSCPBG00000014671	-	100	100.000	MGP_PahariEiJ_G0020513	Ddx39b	64	100.000	Mus_pahari
ENSCPBG00000014671	-	100	100.000	MGP_SPRETEiJ_G0022424	Ddx39b	64	100.000	Mus_spretus
ENSCPBG00000014671	-	100	100.000	ENSMPUG00000011407	DDX39B	64	100.000	Mustela_putorius_furo
ENSCPBG00000014671	-	100	100.000	ENSMLUG00000001681	DDX39B	88	100.000	Myotis_lucifugus
ENSCPBG00000014671	-	100	100.000	ENSNGAG00000022948	Ddx39b	64	100.000	Nannospalax_galili
ENSCPBG00000014671	-	100	100.000	ENSNLEG00000006094	DDX39B	77	100.000	Nomascus_leucogenys
ENSCPBG00000014671	-	81	100.000	ENSMEUG00000008264	DDX39B	52	100.000	Notamacropus_eugenii
ENSCPBG00000014671	-	100	100.000	ENSOPRG00000011923	DDX39B	64	100.000	Ochotona_princeps
ENSCPBG00000014671	-	100	99.634	ENSODEG00000018083	DDX39B	64	99.634	Octodon_degus
ENSCPBG00000014671	-	100	94.139	ENSONIG00000004740	ddx39b	63	94.139	Oreochromis_niloticus
ENSCPBG00000014671	-	100	100.000	ENSOCUG00000024126	DDX39B	62	100.000	Oryctolagus_cuniculus
ENSCPBG00000014671	-	99	98.148	ENSOGAG00000009067	-	83	98.148	Otolemur_garnettii
ENSCPBG00000014671	-	100	99.267	ENSOGAG00000028850	-	64	99.267	Otolemur_garnettii
ENSCPBG00000014671	-	100	100.000	ENSOARG00000008787	DDX39B	63	100.000	Ovis_aries
ENSCPBG00000014671	-	100	100.000	ENSPPAG00000043072	DDX39B	66	100.000	Pan_paniscus
ENSCPBG00000014671	-	100	100.000	ENSPPRG00000001913	DDX39B	65	100.000	Panthera_pardus
ENSCPBG00000014671	-	100	99.634	ENSPTIG00000017669	DDX39B	64	99.634	Panthera_tigris_altaica
ENSCPBG00000014671	-	100	100.000	ENSPTRG00000032509	DDX39B	66	100.000	Pan_troglodytes
ENSCPBG00000014671	-	100	100.000	ENSPANG00000018609	DDX39B	66	100.000	Papio_anubis
ENSCPBG00000014671	-	100	95.604	ENSPKIG00000011324	ddx39b	62	95.604	Paramormyrops_kingsleyae
ENSCPBG00000014671	-	100	100.000	ENSPEMG00000016905	Ddx39b	64	100.000	Peromyscus_maniculatus_bairdii
ENSCPBG00000014671	-	100	100.000	ENSPCIG00000017572	DDX39B	64	100.000	Phascolarctos_cinereus
ENSCPBG00000014671	-	100	100.000	ENSPPYG00000016433	DDX39B	64	100.000	Pongo_abelii
ENSCPBG00000014671	-	100	99.634	ENSPCAG00000003484	DDX39B	96	99.634	Procavia_capensis
ENSCPBG00000014671	-	100	100.000	ENSPCOG00000018656	DDX39B	64	100.000	Propithecus_coquereli
ENSCPBG00000014671	-	100	100.000	ENSPVAG00000004653	DDX39B	64	100.000	Pteropus_vampyrus
ENSCPBG00000014671	-	80	96.330	ENSPNYG00000010382	ddx39b	53	96.330	Pundamilia_nyererei
ENSCPBG00000014671	-	100	95.971	ENSPNAG00000026926	ddx39b	63	95.971	Pygocentrus_nattereri
ENSCPBG00000014671	-	100	100.000	ENSRNOG00000000841	Ddx39b	64	100.000	Rattus_norvegicus
ENSCPBG00000014671	-	100	83.883	ENSRBIG00000031309	DDX39B	60	83.883	Rhinopithecus_bieti
ENSCPBG00000014671	-	100	100.000	ENSRROG00000039517	DDX39B	66	100.000	Rhinopithecus_roxellana
ENSCPBG00000014671	-	100	83.883	ENSSBOG00000035513	-	60	83.883	Saimiri_boliviensis_boliviensis
ENSCPBG00000014671	-	100	100.000	ENSSHAG00000003209	DDX39B	64	100.000	Sarcophilus_harrisii
ENSCPBG00000014671	-	100	95.604	ENSSFOG00015016107	ddx39b	63	95.604	Scleropages_formosus
ENSCPBG00000014671	-	100	95.971	ENSSDUG00000011557	ddx39b	63	95.971	Seriola_dumerili
ENSCPBG00000014671	-	100	95.604	ENSSLDG00000015763	ddx39b	63	95.604	Seriola_lalandi_dorsalis
ENSCPBG00000014671	-	80	79.909	ENSSARG00000005245	DDX39B	59	79.909	Sorex_araneus
ENSCPBG00000014671	-	100	99.634	ENSSPUG00000012805	DDX39B	64	99.634	Sphenodon_punctatus
ENSCPBG00000014671	-	100	100.000	ENSSSCG00000001400	DDX39B	79	100.000	Sus_scrofa
ENSCPBG00000014671	-	100	75.092	ENSTBEG00000003721	DDX39B	63	75.092	Tupaia_belangeri
ENSCPBG00000014671	-	92	99.600	ENSTTRG00000014074	DDX39B	58	99.600	Tursiops_truncatus
ENSCPBG00000014671	-	98	84.015	ENSUAMG00000027335	DDX39B	61	84.015	Ursus_americanus
ENSCPBG00000014671	-	100	94.139	ENSUMAG00000015124	DDX39B	66	94.139	Ursus_maritimus
ENSCPBG00000014671	-	100	100.000	ENSVVUG00000019518	DDX39B	63	100.000	Vulpes_vulpes
ENSCPBG00000014671	-	96	85.985	ENSXETG00000002498	ddx39b	61	85.985	Xenopus_tropicalis