EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000014704 (Gene tree)
Gene ID: 101931738
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 9146 bases
Position: chrKK082921.1:6657045-6666190
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000020441	MBD	PF01429.19	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024056	MBD4-201	2708	-	ENSCPBP00000020441	571 (aa)	XP_005288518	UPI000388CB5A

Gene Model

Click here to download ENSCPBG00000014704's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014704	MBD4	89	50.385	ENSG00000129071	MBD4	69	86.111	Homo_sapiens
ENSCPBG00000014704	MBD4	89	51.172	ENSAMEG00000004562	MBD4	86	51.172	Ailuropoda_melanoleuca
ENSCPBG00000014704	MBD4	62	80.000	ENSATEG00000014594	MBD4	68	80.000	Anabas_testudineus
ENSCPBG00000014704	MBD4	92	50.272	ENSACAG00000014733	MBD4	92	50.272	Anolis_carolinensis
ENSCPBG00000014704	MBD4	89	50.951	ENSBTAG00000021645	MBD4	87	50.951	Bos_taurus
ENSCPBG00000014704	MBD4	89	50.787	ENSCJAG00000017293	MBD4	86	50.984	Callithrix_jacchus
ENSCPBG00000014704	MBD4	89	51.167	ENSCAFG00000004867	MBD4	86	51.167	Canis_familiaris
ENSCPBG00000014704	MBD4	89	51.167	ENSCAFG00020007082	MBD4	86	51.167	Canis_lupus_dingo
ENSCPBG00000014704	MBD4	98	48.951	ENSCHIG00000009760	MBD4	94	48.951	Capra_hircus
ENSCPBG00000014704	MBD4	89	50.487	ENSCCAG00000029796	MBD4	86	50.487	Cebus_capucinus
ENSCPBG00000014704	MBD4	89	49.904	ENSCATG00000035211	MBD4	72	84.444	Cercocebus_atys
ENSCPBG00000014704	MBD4	99	47.038	ENSCLAG00000008974	MBD4	96	47.038	Chinchilla_lanigera
ENSCPBG00000014704	MBD4	89	50.672	ENSCSAG00000009037	MBD4	87	50.958	Chlorocebus_sabaeus
ENSCPBG00000014704	MBD4	89	50.288	ENSCANG00000007120	MBD4	87	50.766	Colobus_angolensis_palliatus
ENSCPBG00000014704	MBD4	98	48.410	ENSCGRG00001003507	Mbd4	94	48.410	Cricetulus_griseus_chok1gshd
ENSCPBG00000014704	MBD4	98	48.410	ENSCGRG00000010974	Mbd4	94	48.410	Cricetulus_griseus_crigri
ENSCPBG00000014704	MBD4	89	50.476	ENSDNOG00000049619	MBD4	87	50.476	Dasypus_novemcinctus
ENSCPBG00000014704	MBD4	79	44.273	ENSDORG00000000902	-	90	44.273	Dipodomys_ordii
ENSCPBG00000014704	MBD4	89	50.579	ENSEASG00005014800	MBD4	87	50.579	Equus_asinus_asinus
ENSCPBG00000014704	MBD4	89	50.579	ENSECAG00000022106	MBD4	87	50.579	Equus_caballus
ENSCPBG00000014704	MBD4	85	47.284	ENSEEUG00000011459	MBD4	88	47.870	Erinaceus_europaeus
ENSCPBG00000014704	MBD4	89	51.657	ENSFCAG00000000083	MBD4	86	51.657	Felis_catus
ENSCPBG00000014704	MBD4	84	53.306	ENSFALG00000013663	MBD4	100	52.600	Ficedula_albicollis
ENSCPBG00000014704	MBD4	100	92.644	ENSGAGG00000018644	MBD4	100	92.644	Gopherus_agassizii
ENSCPBG00000014704	MBD4	89	50.000	ENSGGOG00000010698	MBD4	87	50.192	Gorilla_gorilla
ENSCPBG00000014704	MBD4	90	49.618	ENSHGLG00000009034	MBD4	88	49.618	Heterocephalus_glaber_female
ENSCPBG00000014704	MBD4	90	49.240	ENSHGLG00100000135	MBD4	88	49.240	Heterocephalus_glaber_male
ENSCPBG00000014704	MBD4	89	48.473	ENSSTOG00000020663	MBD4	87	48.473	Ictidomys_tridecemlineatus
ENSCPBG00000014704	MBD4	89	42.938	ENSLOCG00000013054	MBD4	99	43.527	Lepisosteus_oculatus
ENSCPBG00000014704	MBD4	89	50.289	ENSLAFG00000010609	MBD4	86	50.289	Loxodonta_africana
ENSCPBG00000014704	MBD4	65	87.023	ENSMFAG00000002266	MBD4	70	87.023	Macaca_fascicularis
ENSCPBG00000014704	MBD4	60	87.023	ENSMMUG00000012723	MBD4	65	87.023	Macaca_mulatta
ENSCPBG00000014704	MBD4	61	89.720	ENSMNEG00000029752	MBD4	68	89.720	Macaca_nemestrina
ENSCPBG00000014704	MBD4	66	84.444	ENSMLEG00000024859	MBD4	72	84.444	Mandrillus_leucophaeus
ENSCPBG00000014704	MBD4	90	50.474	ENSMICG00000008022	MBD4	87	50.474	Microcebus_murinus
ENSCPBG00000014704	MBD4	88	52.632	ENSMODG00000006399	-	99	52.632	Monodelphis_domestica
ENSCPBG00000014704	MBD4	99	47.028	MGP_CAROLIEiJ_G0028760	Mbd4	95	47.028	Mus_caroli
ENSCPBG00000014704	MBD4	99	47.469	ENSMUSG00000030322	Mbd4	96	47.469	Mus_musculus
ENSCPBG00000014704	MBD4	96	46.678	MGP_PahariEiJ_G0022511	-	93	46.678	Mus_pahari
ENSCPBG00000014704	MBD4	96	47.500	MGP_SPRETEiJ_G0029788	Mbd4	93	47.500	Mus_spretus
ENSCPBG00000014704	MBD4	92	49.906	ENSMPUG00000017195	MBD4	90	49.906	Mustela_putorius_furo
ENSCPBG00000014704	MBD4	89	52.216	ENSMLUG00000014766	MBD4	92	52.216	Myotis_lucifugus
ENSCPBG00000014704	MBD4	89	50.096	ENSNLEG00000005337	MBD4	87	50.289	Nomascus_leucogenys
ENSCPBG00000014704	MBD4	89	49.715	ENSOPRG00000000473	MBD4	87	49.715	Ochotona_princeps
ENSCPBG00000014704	MBD4	70	43.812	ENSOANG00000004589	-	89	43.812	Ornithorhynchus_anatinus
ENSCPBG00000014704	MBD4	89	47.876	ENSOCUG00000013006	MBD4	86	47.876	Oryctolagus_cuniculus
ENSCPBG00000014704	MBD4	54	81.065	ENSORLG00000011049	mbd4	73	81.065	Oryzias_latipes
ENSCPBG00000014704	MBD4	54	81.065	ENSORLG00020020013	mbd4	73	81.065	Oryzias_latipes_hni
ENSCPBG00000014704	MBD4	54	80.473	ENSORLG00015015342	mbd4	73	80.473	Oryzias_latipes_hsok
ENSCPBG00000014704	MBD4	88	49.805	ENSOGAG00000010236	MBD4	86	49.805	Otolemur_garnettii
ENSCPBG00000014704	MBD4	93	50.270	ENSOARG00000014699	MBD4	94	50.270	Ovis_aries
ENSCPBG00000014704	MBD4	89	49.423	ENSPPAG00000036528	MBD4	87	49.423	Pan_paniscus
ENSCPBG00000014704	MBD4	89	50.682	ENSPPRG00000016480	MBD4	86	50.682	Panthera_pardus
ENSCPBG00000014704	MBD4	89	49.808	ENSPTRG00000015377	MBD4	87	49.808	Pan_troglodytes
ENSCPBG00000014704	MBD4	65	87.023	ENSPANG00000015047	MBD4	70	87.023	Papio_anubis
ENSCPBG00000014704	MBD4	98	83.275	ENSPSIG00000007892	MBD4	97	83.275	Pelodiscus_sinensis
ENSCPBG00000014704	MBD4	95	49.457	ENSPCIG00000002276	-	99	49.457	Phascolarctos_cinereus
ENSCPBG00000014704	MBD4	89	49.520	ENSPPYG00000013417	MBD4	87	49.617	Pongo_abelii
ENSCPBG00000014704	MBD4	91	46.765	ENSPCAG00000012915	MBD4	95	47.601	Procavia_capensis
ENSCPBG00000014704	MBD4	89	52.124	ENSPVAG00000005238	MBD4	86	52.124	Pteropus_vampyrus
ENSCPBG00000014704	MBD4	99	47.295	ENSRNOG00000010919	Mbd4	95	47.295	Rattus_norvegicus
ENSCPBG00000014704	MBD4	60	87.023	ENSRBIG00000027722	MBD4	65	87.023	Rhinopithecus_bieti
ENSCPBG00000014704	MBD4	60	87.023	ENSRROG00000029136	MBD4	65	87.023	Rhinopithecus_roxellana
ENSCPBG00000014704	MBD4	89	50.870	ENSSBOG00000016810	MBD4	86	50.870	Saimiri_boliviensis_boliviensis
ENSCPBG00000014704	MBD4	100	49.225	ENSSHAG00000012953	MBD4	96	49.225	Sarcophilus_harrisii
ENSCPBG00000014704	MBD4	89	41.667	ENSSFOG00015016292	mbd4	97	41.667	Scleropages_formosus
ENSCPBG00000014704	MBD4	83	47.239	ENSSARG00000004496	-	80	47.239	Sorex_araneus
ENSCPBG00000014704	MBD4	97	65.302	ENSSPUG00000017344	MBD4	99	65.302	Sphenodon_punctatus
ENSCPBG00000014704	MBD4	98	49.474	ENSSSCG00000033303	MBD4	94	49.474	Sus_scrofa
ENSCPBG00000014704	MBD4	68	53.211	ENSTBEG00000003041	-	68	53.211	Tupaia_belangeri
ENSCPBG00000014704	MBD4	89	50.775	ENSTTRG00000011265	MBD4	89	50.775	Tursiops_truncatus
ENSCPBG00000014704	MBD4	89	50.977	ENSUAMG00000000814	MBD4	99	50.977	Ursus_americanus
ENSCPBG00000014704	MBD4	89	50.781	ENSUMAG00000017542	MBD4	87	50.781	Ursus_maritimus
ENSCPBG00000014704	MBD4	50	58.333	ENSVPAG00000004040	-	53	58.333	Vicugna_pacos
ENSCPBG00000014704	MBD4	89	51.167	ENSVVUG00000014222	MBD4	86	51.167	Vulpes_vulpes
ENSCPBG00000014704	MBD4	88	43.883	ENSXETG00000026622	mbd4	90	43.883	Xenopus_tropicalis