EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000014791 (Gene tree)
Gene ID: 101934643
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4944 bases
Position: chrKK082920.1:5007795-5012738
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000020549	PRP38	PF03371.15	1.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024193	PRPF38A-201	1074	-	ENSCPBP00000020549	312 (aa)	XP_005284869	UPI000388B99F

Gene Model

Click here to download ENSCPBG00000014791's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014791	PRPF38A	100	98.077	ENSG00000134748	PRPF38A	100	98.077	Homo_sapiens
ENSCPBG00000014791	PRPF38A	71	89.140	ENSAPOG00000011652	prpf38a	100	82.109	Acanthochromis_polyacanthus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSAMEG00000009319	PRPF38A	100	98.077	Ailuropoda_melanoleuca
ENSCPBG00000014791	PRPF38A	71	86.878	ENSACIG00000012292	prpf38a	76	86.147	Amphilophus_citrinellus
ENSCPBG00000014791	PRPF38A	71	89.140	ENSAOCG00000018004	prpf38a	100	82.109	Amphiprion_ocellaris
ENSCPBG00000014791	PRPF38A	71	89.140	ENSAPEG00000021414	prpf38a	100	82.109	Amphiprion_percula
ENSCPBG00000014791	PRPF38A	71	88.688	ENSATEG00000004608	prpf38a	100	81.470	Anabas_testudineus
ENSCPBG00000014791	PRPF38A	79	98.785	ENSAPLG00000005827	PRPF38A	99	98.785	Anas_platyrhynchos
ENSCPBG00000014791	PRPF38A	100	97.115	ENSACAG00000008249	PRPF38A	100	97.115	Anolis_carolinensis
ENSCPBG00000014791	PRPF38A	100	66.772	ENSANAG00000029204	-	100	62.342	Aotus_nancymaae
ENSCPBG00000014791	PRPF38A	100	98.077	ENSANAG00000027839	PRPF38A	100	98.077	Aotus_nancymaae
ENSCPBG00000014791	PRPF38A	71	86.878	ENSACLG00000021595	prpf38a	100	80.511	Astatotilapia_calliptera
ENSCPBG00000014791	PRPF38A	100	81.150	ENSAMXG00000029274	prpf38a	100	81.150	Astyanax_mexicanus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSBTAG00000002720	PRPF38A	100	98.077	Bos_taurus
ENSCPBG00000014791	PRPF38A	63	63.077	WBGene00008380	prp-38	68	60.731	Caenorhabditis_elegans
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCJAG00000021594	PRPF38A	100	98.077	Callithrix_jacchus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCAFG00000003740	PRPF38A	100	98.077	Canis_familiaris
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCAFG00020010939	PRPF38A	100	98.077	Canis_lupus_dingo
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCHIG00000024730	PRPF38A	100	98.077	Capra_hircus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSTSYG00000009868	-	100	98.077	Carlito_syrichta
ENSCPBG00000014791	PRPF38A	86	96.654	ENSTSYG00000031994	-	95	96.654	Carlito_syrichta
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCPOG00000005079	PRPF38A	100	98.077	Cavia_porcellus
ENSCPBG00000014791	PRPF38A	100	97.756	ENSCCAG00000026502	PRPF38A	100	97.756	Cebus_capucinus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCATG00000032296	PRPF38A	100	98.077	Cercocebus_atys
ENSCPBG00000014791	PRPF38A	100	64.103	ENSCATG00000044190	-	100	62.821	Cercocebus_atys
ENSCPBG00000014791	PRPF38A	100	98.077	ENSCLAG00000005816	PRPF38A	100	98.077	Chinchilla_lanigera
ENSCPBG00000014791	PRPF38A	78	96.875	ENSCHOG00000008388	PRPF38A	77	96.875	Choloepus_hoffmanni
ENSCPBG00000014791	PRPF38A	70	70.507	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSCPBG00000014791	PRPF38A	96	97.993	ENSCANG00000032608	PRPF38A	100	97.993	Colobus_angolensis_palliatus
ENSCPBG00000014791	PRPF38A	100	98.397	ENSCGRG00001018502	-	100	98.397	Cricetulus_griseus_chok1gshd
ENSCPBG00000014791	PRPF38A	74	83.550	ENSCGRG00001002557	-	78	83.550	Cricetulus_griseus_chok1gshd
ENSCPBG00000014791	PRPF38A	100	98.397	ENSCGRG00000014868	Prpf38a	100	98.397	Cricetulus_griseus_crigri
ENSCPBG00000014791	PRPF38A	71	87.330	ENSCSEG00000001269	prpf38a	79	86.580	Cynoglossus_semilaevis
ENSCPBG00000014791	PRPF38A	71	89.140	ENSCVAG00000012305	prpf38a	100	81.470	Cyprinodon_variegatus
ENSCPBG00000014791	PRPF38A	100	80.831	ENSDARG00000039213	prpf38a	100	80.831	Danio_rerio
ENSCPBG00000014791	PRPF38A	100	98.077	ENSDNOG00000042326	PRPF38A	100	98.077	Dasypus_novemcinctus
ENSCPBG00000014791	PRPF38A	84	81.749	ENSDORG00000023691	-	78	85.903	Dipodomys_ordii
ENSCPBG00000014791	PRPF38A	100	84.615	ENSDORG00000023857	-	100	84.615	Dipodomys_ordii
ENSCPBG00000014791	PRPF38A	84	81.749	ENSDORG00000025371	-	78	85.903	Dipodomys_ordii
ENSCPBG00000014791	PRPF38A	63	74.619	FBgn0050342	Prp38	57	75.532	Drosophila_melanogaster
ENSCPBG00000014791	PRPF38A	76	80.672	ENSEBUG00000012588	prpf38a	75	80.687	Eptatretus_burgeri
ENSCPBG00000014791	PRPF38A	100	98.077	ENSEASG00005014427	PRPF38A	100	98.077	Equus_asinus_asinus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSECAG00000022628	PRPF38A	100	98.077	Equus_caballus
ENSCPBG00000014791	PRPF38A	71	85.973	ENSELUG00000021094	prpf38a	100	79.872	Esox_lucius
ENSCPBG00000014791	PRPF38A	100	98.077	ENSFCAG00000002518	PRPF38A	100	98.077	Felis_catus
ENSCPBG00000014791	PRPF38A	99	85.209	ENSFALG00000003612	-	77	90.476	Ficedula_albicollis
ENSCPBG00000014791	PRPF38A	87	97.417	ENSFALG00000005598	-	100	97.417	Ficedula_albicollis
ENSCPBG00000014791	PRPF38A	100	97.756	ENSFDAG00000011287	PRPF38A	100	97.756	Fukomys_damarensis
ENSCPBG00000014791	PRPF38A	84	79.167	ENSFHEG00000014317	prpf38a	78	87.446	Fundulus_heteroclitus
ENSCPBG00000014791	PRPF38A	53	93.976	ENSGMOG00000011384	prpf38a	54	93.976	Gadus_morhua
ENSCPBG00000014791	PRPF38A	100	98.397	ENSGALG00000010627	PRPF38A	100	98.397	Gallus_gallus
ENSCPBG00000014791	PRPF38A	71	90.045	ENSGAFG00000012422	prpf38a	100	82.109	Gambusia_affinis
ENSCPBG00000014791	PRPF38A	71	86.099	ENSGACG00000005423	prpf38a	100	79.683	Gasterosteus_aculeatus
ENSCPBG00000014791	PRPF38A	100	99.679	ENSGAGG00000020547	PRPF38A	100	99.679	Gopherus_agassizii
ENSCPBG00000014791	PRPF38A	100	98.077	ENSGGOG00000003940	PRPF38A	100	98.077	Gorilla_gorilla
ENSCPBG00000014791	PRPF38A	61	91.005	ENSHBUG00000020572	prpf38a	80	90.957	Haplochromis_burtoni
ENSCPBG00000014791	PRPF38A	100	82.051	ENSHGLG00000007918	-	100	81.731	Heterocephalus_glaber_female
ENSCPBG00000014791	PRPF38A	100	98.077	ENSHGLG00000000475	PRPF38A	100	98.077	Heterocephalus_glaber_female
ENSCPBG00000014791	PRPF38A	100	82.051	ENSHGLG00100003928	-	100	81.731	Heterocephalus_glaber_male
ENSCPBG00000014791	PRPF38A	100	98.077	ENSHGLG00100008935	PRPF38A	100	98.077	Heterocephalus_glaber_male
ENSCPBG00000014791	PRPF38A	87	69.373	ENSHCOG00000020781	prpf38a	59	90.957	Hippocampus_comes
ENSCPBG00000014791	PRPF38A	74	86.638	ENSIPUG00000005757	prpf38a	75	86.638	Ictalurus_punctatus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSSTOG00000015610	PRPF38A	100	98.077	Ictidomys_tridecemlineatus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSJJAG00000015811	Prpf38a	100	98.077	Jaculus_jaculus
ENSCPBG00000014791	PRPF38A	71	88.688	ENSKMAG00000006588	prpf38a	100	81.150	Kryptolebias_marmoratus
ENSCPBG00000014791	PRPF38A	96	79.530	ENSLBEG00000020585	prpf38a	100	79.872	Labrus_bergylta
ENSCPBG00000014791	PRPF38A	100	93.269	ENSLACG00000011495	PRPF38A	100	93.269	Latimeria_chalumnae
ENSCPBG00000014791	PRPF38A	100	80.511	ENSLOCG00000006262	prpf38a	100	81.789	Lepisosteus_oculatus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSLAFG00000025862	PRPF38A	100	98.077	Loxodonta_africana
ENSCPBG00000014791	PRPF38A	100	98.077	ENSMFAG00000039449	PRPF38A	100	98.077	Macaca_fascicularis
ENSCPBG00000014791	PRPF38A	87	97.059	ENSMMUG00000014333	PRPF38A	98	97.059	Macaca_mulatta
ENSCPBG00000014791	PRPF38A	100	63.782	ENSMNEG00000040242	-	100	62.821	Macaca_nemestrina
ENSCPBG00000014791	PRPF38A	100	98.077	ENSMNEG00000031221	PRPF38A	100	98.077	Macaca_nemestrina
ENSCPBG00000014791	PRPF38A	100	98.077	ENSMLEG00000041105	PRPF38A	100	98.077	Mandrillus_leucophaeus
ENSCPBG00000014791	PRPF38A	71	88.688	ENSMAMG00000015431	prpf38a	100	81.789	Mastacembelus_armatus
ENSCPBG00000014791	PRPF38A	71	86.878	ENSMZEG00005017838	prpf38a	100	80.511	Maylandia_zebra
ENSCPBG00000014791	PRPF38A	96	98.328	ENSMGAG00000011176	PRPF38A	100	98.328	Meleagris_gallopavo
ENSCPBG00000014791	PRPF38A	85	93.561	ENSMAUG00000018029	-	87	93.506	Mesocricetus_auratus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSMICG00000014193	PRPF38A	100	98.077	Microcebus_murinus
ENSCPBG00000014791	PRPF38A	100	98.397	ENSMOCG00000013080	Prpf38a	100	98.397	Microtus_ochrogaster
ENSCPBG00000014791	PRPF38A	83	80.620	ENSMMOG00000016972	prpf38a	81	86.147	Mola_mola
ENSCPBG00000014791	PRPF38A	100	97.764	ENSMODG00000000644	PRPF38A	100	97.764	Monodelphis_domestica
ENSCPBG00000014791	PRPF38A	71	87.783	ENSMALG00000019363	prpf38a	97	81.150	Monopterus_albus
ENSCPBG00000014791	PRPF38A	100	97.436	MGP_CAROLIEiJ_G0026269	Prpf38a	100	97.436	Mus_caroli
ENSCPBG00000014791	PRPF38A	100	97.436	ENSMUSG00000063800	Prpf38a	100	97.436	Mus_musculus
ENSCPBG00000014791	PRPF38A	100	97.436	MGP_PahariEiJ_G0028602	Prpf38a	100	97.436	Mus_pahari
ENSCPBG00000014791	PRPF38A	100	97.115	MGP_SPRETEiJ_G0027238	Prpf38a	100	97.537	Mus_spretus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSMPUG00000006896	PRPF38A	100	98.077	Mustela_putorius_furo
ENSCPBG00000014791	PRPF38A	100	98.397	ENSNGAG00000011884	Prpf38a	100	98.397	Nannospalax_galili
ENSCPBG00000014791	PRPF38A	71	85.520	ENSNBRG00000004013	prpf38a	74	84.848	Neolamprologus_brichardi
ENSCPBG00000014791	PRPF38A	97	71.854	ENSNLEG00000012592	-	99	71.854	Nomascus_leucogenys
ENSCPBG00000014791	PRPF38A	93	97.924	ENSNLEG00000017999	PRPF38A	93	97.924	Nomascus_leucogenys
ENSCPBG00000014791	PRPF38A	100	65.705	ENSNLEG00000033398	-	94	65.705	Nomascus_leucogenys
ENSCPBG00000014791	PRPF38A	100	94.872	ENSMEUG00000003860	PRPF38A	100	94.872	Notamacropus_eugenii
ENSCPBG00000014791	PRPF38A	77	98.333	ENSOPRG00000008985	PRPF38A	100	98.333	Ochotona_princeps
ENSCPBG00000014791	PRPF38A	100	98.077	ENSODEG00000005869	PRPF38A	100	98.077	Octodon_degus
ENSCPBG00000014791	PRPF38A	71	86.425	ENSONIG00000007816	prpf38a	100	80.192	Oreochromis_niloticus
ENSCPBG00000014791	PRPF38A	100	65.605	ENSOANG00000009541	-	100	65.605	Ornithorhynchus_anatinus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSOCUG00000000963	PRPF38A	100	98.077	Oryctolagus_cuniculus
ENSCPBG00000014791	PRPF38A	96	81.333	ENSORLG00000013485	prpf38a	99	81.410	Oryzias_latipes
ENSCPBG00000014791	PRPF38A	96	81.333	ENSORLG00020002130	prpf38a	99	81.410	Oryzias_latipes_hni
ENSCPBG00000014791	PRPF38A	96	81.000	ENSORLG00015021393	prpf38a	99	81.090	Oryzias_latipes_hsok
ENSCPBG00000014791	PRPF38A	96	80.872	ENSOMEG00000016333	prpf38a	100	80.831	Oryzias_melastigma
ENSCPBG00000014791	PRPF38A	100	98.077	ENSOGAG00000005423	PRPF38A	100	98.077	Otolemur_garnettii
ENSCPBG00000014791	PRPF38A	100	98.077	ENSOARG00000005373	PRPF38A	100	98.077	Ovis_aries
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPPAG00000030905	PRPF38A	100	98.077	Pan_paniscus
ENSCPBG00000014791	PRPF38A	100	75.962	ENSPPAG00000033867	-	100	75.962	Pan_paniscus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPPRG00000013268	PRPF38A	100	98.077	Panthera_pardus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPTIG00000015419	PRPF38A	100	98.077	Panthera_tigris_altaica
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPTRG00000000739	PRPF38A	100	98.077	Pan_troglodytes
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPANG00000015483	PRPF38A	100	98.077	Papio_anubis
ENSCPBG00000014791	PRPF38A	100	79.167	ENSPKIG00000011439	prpf38a	100	80.449	Paramormyrops_kingsleyae
ENSCPBG00000014791	PRPF38A	100	99.038	ENSPSIG00000017487	PRPF38A	100	99.038	Pelodiscus_sinensis
ENSCPBG00000014791	PRPF38A	81	81.890	ENSPMGG00000021352	prpf38a	99	77.994	Periophthalmus_magnuspinnatus
ENSCPBG00000014791	PRPF38A	100	98.397	ENSPEMG00000023277	-	100	98.397	Peromyscus_maniculatus_bairdii
ENSCPBG00000014791	PRPF38A	100	91.429	ENSPEMG00000011212	-	100	90.794	Peromyscus_maniculatus_bairdii
ENSCPBG00000014791	PRPF38A	100	97.444	ENSPCIG00000022369	-	100	97.444	Phascolarctos_cinereus
ENSCPBG00000014791	PRPF38A	83	81.081	ENSPFOG00000004248	prpf38a	100	82.109	Poecilia_formosa
ENSCPBG00000014791	PRPF38A	92	76.190	ENSPLAG00000010328	prpf38a	100	82.109	Poecilia_latipinna
ENSCPBG00000014791	PRPF38A	84	78.652	ENSPMEG00000011804	prpf38a	100	82.109	Poecilia_mexicana
ENSCPBG00000014791	PRPF38A	95	72.313	ENSPREG00000002835	prpf38a	58	93.085	Poecilia_reticulata
ENSCPBG00000014791	PRPF38A	100	89.590	ENSPPYG00000001348	PRPF38A	100	89.590	Pongo_abelii
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPCAG00000013328	PRPF38A	100	98.077	Procavia_capensis
ENSCPBG00000014791	PRPF38A	100	75.000	ENSPCOG00000020709	-	76	79.221	Propithecus_coquereli
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPCOG00000016387	-	100	98.077	Propithecus_coquereli
ENSCPBG00000014791	PRPF38A	100	98.077	ENSPVAG00000009803	PRPF38A	100	98.077	Pteropus_vampyrus
ENSCPBG00000014791	PRPF38A	71	86.878	ENSPNYG00000005571	prpf38a	100	80.511	Pundamilia_nyererei
ENSCPBG00000014791	PRPF38A	100	81.789	ENSPNAG00000010399	prpf38a	100	81.789	Pygocentrus_nattereri
ENSCPBG00000014791	PRPF38A	100	98.077	ENSRNOG00000009451	Prpf38a	100	98.077	Rattus_norvegicus
ENSCPBG00000014791	PRPF38A	100	60.897	ENSRBIG00000034053	-	100	58.013	Rhinopithecus_bieti
ENSCPBG00000014791	PRPF38A	100	98.077	ENSRBIG00000036442	PRPF38A	100	98.077	Rhinopithecus_bieti
ENSCPBG00000014791	PRPF38A	100	98.077	ENSRROG00000032788	PRPF38A	100	98.077	Rhinopithecus_roxellana
ENSCPBG00000014791	PRPF38A	98	77.451	ENSRROG00000040003	-	99	77.451	Rhinopithecus_roxellana
ENSCPBG00000014791	PRPF38A	100	98.077	ENSSBOG00000019515	PRPF38A	100	98.077	Saimiri_boliviensis_boliviensis
ENSCPBG00000014791	PRPF38A	96	70.395	ENSSHAG00000006029	-	74	80.995	Sarcophilus_harrisii
ENSCPBG00000014791	PRPF38A	87	97.048	ENSSHAG00000006906	-	100	97.048	Sarcophilus_harrisii
ENSCPBG00000014791	PRPF38A	100	79.553	ENSSFOG00015013572	prpf38a	100	80.192	Scleropages_formosus
ENSCPBG00000014791	PRPF38A	71	88.235	ENSSMAG00000015379	prpf38a	75	87.446	Scophthalmus_maximus
ENSCPBG00000014791	PRPF38A	71	88.688	ENSSDUG00000001324	prpf38a	100	81.789	Seriola_dumerili
ENSCPBG00000014791	PRPF38A	71	88.688	ENSSLDG00000014803	prpf38a	100	81.789	Seriola_lalandi_dorsalis
ENSCPBG00000014791	PRPF38A	100	81.090	ENSSARG00000014458	PRPF38A	100	81.090	Sorex_araneus
ENSCPBG00000014791	PRPF38A	100	96.795	ENSSPUG00000013259	PRPF38A	100	96.795	Sphenodon_punctatus
ENSCPBG00000014791	PRPF38A	71	71.041	ENSSPAG00000010449	prpf38a	100	64.423	Stegastes_partitus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSSSCG00000028288	PRPF38A	100	98.077	Sus_scrofa
ENSCPBG00000014791	PRPF38A	100	94.231	ENSTGUG00000008995	PRPF38A	100	94.231	Taeniopygia_guttata
ENSCPBG00000014791	PRPF38A	71	86.878	ENSTRUG00000003374	prpf38a	71	86.147	Takifugu_rubripes
ENSCPBG00000014791	PRPF38A	71	85.202	ENSTNIG00000005533	prpf38a	100	79.048	Tetraodon_nigroviridis
ENSCPBG00000014791	PRPF38A	100	97.436	ENSTBEG00000000725	PRPF38A	100	97.436	Tupaia_belangeri
ENSCPBG00000014791	PRPF38A	100	98.077	ENSTTRG00000016139	PRPF38A	100	98.077	Tursiops_truncatus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSUAMG00000000625	PRPF38A	100	98.077	Ursus_americanus
ENSCPBG00000014791	PRPF38A	100	98.077	ENSUMAG00000022674	PRPF38A	100	98.077	Ursus_maritimus
ENSCPBG00000014791	PRPF38A	74	97.403	ENSVPAG00000000907	PRPF38A	100	92.308	Vicugna_pacos
ENSCPBG00000014791	PRPF38A	100	98.077	ENSVVUG00000004475	PRPF38A	100	98.077	Vulpes_vulpes
ENSCPBG00000014791	PRPF38A	100	84.665	ENSXETG00000008060	prpf38a	100	88.498	Xenopus_tropicalis
ENSCPBG00000014791	PRPF38A	71	87.892	ENSXCOG00000007393	prpf38a	77	87.124	Xiphophorus_couchianus
ENSCPBG00000014791	PRPF38A	71	90.045	ENSXMAG00000026143	prpf38a	100	82.109	Xiphophorus_maculatus