EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000014888 (Gene tree)
Gene ID: 101934935
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5899 bases
Position: chrKK088184.1:8434680-8440578
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000020709	Ribosomal_S17	PF00366.20	2.6e-17	1	1
ENSCPBP00000020710	Ribosomal_S17	PF00366.20	2.6e-17	1	1
ENSCPBP00000020711	Ribosomal_S17	PF00366.20	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024377	-	965	-	ENSCPBP00000020711	137 (aa)	XP_005283492	UPI000388AC77
ENSCPBT00000024376	-	1121	-	ENSCPBP00000020710	137 (aa)	XP_005283492	UPI000388AC77
ENSCPBT00000024375	-	811	-	ENSCPBP00000020709	137 (aa)	XP_005283492	UPI000388AC77

Gene Model

Click here to download ENSCPBG00000014888's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014888	-	98	74.627	ENSG00000239789	MRPS17	99	74.627	Homo_sapiens
ENSCPBG00000014888	-	98	71.642	ENSAPOG00000000295	mrps17	81	71.642	Acanthochromis_polyacanthus
ENSCPBG00000014888	-	99	69.118	ENSAMEG00000016161	-	95	69.118	Ailuropoda_melanoleuca
ENSCPBG00000014888	-	93	76.378	ENSACIG00000019454	mrps17	90	76.378	Amphilophus_citrinellus
ENSCPBG00000014888	-	98	70.896	ENSAOCG00000015138	mrps17	90	70.896	Amphiprion_ocellaris
ENSCPBG00000014888	-	98	71.642	ENSAPEG00000017481	mrps17	90	71.642	Amphiprion_percula
ENSCPBG00000014888	-	96	68.939	ENSATEG00000007899	mrps17	90	68.657	Anabas_testudineus
ENSCPBG00000014888	-	100	87.591	ENSAPLG00000010523	-	100	87.591	Anas_platyrhynchos
ENSCPBG00000014888	-	99	62.500	ENSANAG00000025061	-	100	62.500	Aotus_nancymaae
ENSCPBG00000014888	-	99	58.824	ENSANAG00000023853	-	100	58.824	Aotus_nancymaae
ENSCPBG00000014888	-	70	65.625	ENSANAG00000030302	-	80	65.625	Aotus_nancymaae
ENSCPBG00000014888	-	98	74.627	ENSACLG00000007174	mrps17	90	74.627	Astatotilapia_calliptera
ENSCPBG00000014888	-	96	71.970	ENSAMXG00000030410	mrps17	94	71.111	Astyanax_mexicanus
ENSCPBG00000014888	-	99	72.794	ENSBTAG00000007934	MRPS17	100	72.794	Bos_taurus
ENSCPBG00000014888	-	99	72.059	ENSBTAG00000023186	-	100	72.059	Bos_taurus
ENSCPBG00000014888	-	99	69.853	ENSCJAG00000021291	-	100	69.853	Callithrix_jacchus
ENSCPBG00000014888	-	99	64.706	ENSCJAG00000022879	-	100	64.706	Callithrix_jacchus
ENSCPBG00000014888	-	99	69.118	ENSCJAG00000022938	-	100	69.118	Callithrix_jacchus
ENSCPBG00000014888	-	99	71.324	ENSCAFG00000010098	-	92	71.324	Canis_familiaris
ENSCPBG00000014888	-	99	71.324	ENSCAFG00020004866	-	100	71.324	Canis_lupus_dingo
ENSCPBG00000014888	-	99	72.059	ENSCHIG00000014572	-	100	72.059	Capra_hircus
ENSCPBG00000014888	-	99	72.794	ENSTSYG00000001260	-	100	72.794	Carlito_syrichta
ENSCPBG00000014888	-	79	81.481	ENSCAPG00000006241	-	92	81.481	Cavia_aperea
ENSCPBG00000014888	-	99	73.529	ENSCCAG00000025426	-	100	73.529	Cebus_capucinus
ENSCPBG00000014888	-	99	60.294	ENSCCAG00000037194	-	100	60.294	Cebus_capucinus
ENSCPBG00000014888	-	97	62.406	ENSCATG00000030575	-	98	62.406	Cercocebus_atys
ENSCPBG00000014888	-	84	72.414	ENSCATG00000039682	-	100	72.414	Cercocebus_atys
ENSCPBG00000014888	-	99	73.529	ENSCLAG00000007650	-	100	73.529	Chinchilla_lanigera
ENSCPBG00000014888	-	99	73.529	ENSCSAG00000016120	-	100	73.529	Chlorocebus_sabaeus
ENSCPBG00000014888	-	99	66.176	ENSCSAG00000019470	-	100	66.176	Chlorocebus_sabaeus
ENSCPBG00000014888	-	99	71.324	ENSCHOG00000010576	-	100	71.324	Choloepus_hoffmanni
ENSCPBG00000014888	-	69	67.368	ENSCHOG00000013255	-	100	67.368	Choloepus_hoffmanni
ENSCPBG00000014888	-	99	58.824	ENSCANG00000035780	-	94	58.824	Colobus_angolensis_palliatus
ENSCPBG00000014888	-	99	63.235	ENSCANG00000035889	-	100	63.235	Colobus_angolensis_palliatus
ENSCPBG00000014888	-	99	73.529	ENSCANG00000030538	-	100	73.529	Colobus_angolensis_palliatus
ENSCPBG00000014888	-	99	71.111	ENSCGRG00001012873	Mrps17	100	71.111	Cricetulus_griseus_chok1gshd
ENSCPBG00000014888	-	98	69.403	ENSCSEG00000018563	mrps17	90	69.403	Cynoglossus_semilaevis
ENSCPBG00000014888	-	98	73.134	ENSCVAG00000006034	mrps17	90	73.134	Cyprinodon_variegatus
ENSCPBG00000014888	-	99	69.630	ENSDARG00000054164	mrps17	97	69.630	Danio_rerio
ENSCPBG00000014888	-	99	72.794	ENSDNOG00000014785	-	92	72.794	Dasypus_novemcinctus
ENSCPBG00000014888	-	75	33.981	FBgn0034986	mRpS17	66	33.981	Drosophila_melanogaster
ENSCPBG00000014888	-	96	49.673	ENSEBUG00000010858	mrps17	91	49.673	Eptatretus_burgeri
ENSCPBG00000014888	-	93	73.438	ENSEASG00005008885	-	100	73.438	Equus_asinus_asinus
ENSCPBG00000014888	-	93	73.438	ENSECAG00000012583	-	100	73.438	Equus_caballus
ENSCPBG00000014888	-	93	60.156	ENSECAG00000028191	-	100	60.156	Equus_caballus
ENSCPBG00000014888	-	98	73.333	ENSELUG00000006708	mrps17	89	73.333	Esox_lucius
ENSCPBG00000014888	-	97	74.436	ENSFCAG00000041039	-	98	74.436	Felis_catus
ENSCPBG00000014888	-	97	87.970	ENSFALG00000006796	-	90	87.970	Ficedula_albicollis
ENSCPBG00000014888	-	99	72.059	ENSFDAG00000001915	-	100	72.059	Fukomys_damarensis
ENSCPBG00000014888	-	98	71.642	ENSFHEG00000023082	mrps17	90	71.642	Fundulus_heteroclitus
ENSCPBG00000014888	-	99	62.963	ENSGMOG00000007056	mrps17	99	62.963	Gadus_morhua
ENSCPBG00000014888	-	100	88.321	ENSGALG00000002379	MRPS17	100	88.321	Gallus_gallus
ENSCPBG00000014888	-	98	67.910	ENSGAFG00000001727	mrps17	90	67.910	Gambusia_affinis
ENSCPBG00000014888	-	99	71.111	ENSGACG00000020492	mrps17	96	71.111	Gasterosteus_aculeatus
ENSCPBG00000014888	-	99	98.529	ENSGAGG00000022429	-	100	98.529	Gopherus_agassizii
ENSCPBG00000014888	-	99	61.765	ENSGGOG00000044141	-	100	61.765	Gorilla_gorilla
ENSCPBG00000014888	-	99	74.265	ENSGGOG00000039358	-	100	74.265	Gorilla_gorilla
ENSCPBG00000014888	-	98	74.627	ENSHBUG00000006127	mrps17	90	74.627	Haplochromis_burtoni
ENSCPBG00000014888	-	91	56.349	ENSHGLG00000010593	-	96	56.349	Heterocephalus_glaber_female
ENSCPBG00000014888	-	99	74.265	ENSHGLG00100010825	-	100	74.265	Heterocephalus_glaber_male
ENSCPBG00000014888	-	91	56.349	ENSHGLG00100012532	-	96	56.349	Heterocephalus_glaber_male
ENSCPBG00000014888	-	93	65.625	ENSHCOG00000009491	mrps17	89	65.625	Hippocampus_comes
ENSCPBG00000014888	-	98	72.388	ENSIPUG00000007844	MRPS17	94	72.388	Ictalurus_punctatus
ENSCPBG00000014888	-	82	61.947	ENSJJAG00000022596	-	88	61.947	Jaculus_jaculus
ENSCPBG00000014888	-	98	71.642	ENSKMAG00000006452	mrps17	90	71.642	Kryptolebias_marmoratus
ENSCPBG00000014888	-	98	73.134	ENSLBEG00000000120	mrps17	91	73.134	Labrus_bergylta
ENSCPBG00000014888	-	99	76.471	ENSLACG00000018908	mrps17	93	76.471	Latimeria_chalumnae
ENSCPBG00000014888	-	98	69.403	ENSLOCG00000004118	mrps17	92	69.403	Lepisosteus_oculatus
ENSCPBG00000014888	-	86	75.833	ENSLAFG00000027907	-	100	75.833	Loxodonta_africana
ENSCPBG00000014888	-	99	74.265	ENSMFAG00000038594	-	100	74.265	Macaca_fascicularis
ENSCPBG00000014888	-	99	69.853	ENSMMUG00000000585	-	76	69.853	Macaca_mulatta
ENSCPBG00000014888	-	99	63.971	ENSMMUG00000041709	-	94	63.971	Macaca_mulatta
ENSCPBG00000014888	-	99	74.265	ENSMNEG00000035442	-	100	74.265	Macaca_nemestrina
ENSCPBG00000014888	-	94	67.442	ENSMLEG00000011393	-	92	67.442	Mandrillus_leucophaeus
ENSCPBG00000014888	-	99	73.529	ENSMLEG00000040782	-	100	73.529	Mandrillus_leucophaeus
ENSCPBG00000014888	-	98	71.642	ENSMAMG00000020981	mrps17	90	71.642	Mastacembelus_armatus
ENSCPBG00000014888	-	98	74.627	ENSMZEG00005024876	mrps17	90	74.627	Maylandia_zebra
ENSCPBG00000014888	-	100	88.321	ENSMGAG00000004317	-	100	88.321	Meleagris_gallopavo
ENSCPBG00000014888	-	99	71.852	ENSMAUG00000021017	Mrps17	100	71.852	Mesocricetus_auratus
ENSCPBG00000014888	-	99	72.794	ENSMICG00000046806	-	100	72.794	Microcebus_murinus
ENSCPBG00000014888	-	99	68.148	ENSMOCG00000008471	-	100	68.148	Microtus_ochrogaster
ENSCPBG00000014888	-	83	67.544	ENSMOCG00000017721	-	86	67.544	Microtus_ochrogaster
ENSCPBG00000014888	-	98	73.881	ENSMMOG00000012804	mrps17	94	73.881	Mola_mola
ENSCPBG00000014888	-	99	66.667	ENSMODG00000006523	-	100	66.667	Monodelphis_domestica
ENSCPBG00000014888	-	98	73.134	ENSMALG00000018057	mrps17	90	73.134	Monopterus_albus
ENSCPBG00000014888	-	97	69.173	MGP_CAROLIEiJ_G0027784	Mrps17	100	78.161	Mus_caroli
ENSCPBG00000014888	-	97	69.173	ENSMUSG00000034211	Mrps17	100	78.161	Mus_musculus
ENSCPBG00000014888	-	97	69.173	MGP_PahariEiJ_G0024399	Mrps17	100	78.161	Mus_pahari
ENSCPBG00000014888	-	97	69.173	MGP_SPRETEiJ_G0028783	Mrps17	100	78.161	Mus_spretus
ENSCPBG00000014888	-	99	71.324	ENSMPUG00000016230	-	70	71.324	Mustela_putorius_furo
ENSCPBG00000014888	-	99	69.853	ENSMLUG00000016710	-	100	69.853	Myotis_lucifugus
ENSCPBG00000014888	-	99	71.852	ENSNGAG00000020609	Mrps17	99	71.852	Nannospalax_galili
ENSCPBG00000014888	-	98	73.881	ENSNBRG00000002238	mrps17	90	73.881	Neolamprologus_brichardi
ENSCPBG00000014888	-	99	74.265	ENSNLEG00000032290	-	100	74.265	Nomascus_leucogenys
ENSCPBG00000014888	-	83	74.561	ENSMEUG00000005143	-	88	74.561	Notamacropus_eugenii
ENSCPBG00000014888	-	98	69.403	ENSOPRG00000009945	-	100	69.403	Ochotona_princeps
ENSCPBG00000014888	-	99	72.794	ENSODEG00000018639	-	100	72.794	Octodon_degus
ENSCPBG00000014888	-	99	57.353	ENSODEG00000006408	-	100	57.353	Octodon_degus
ENSCPBG00000014888	-	72	76.768	ENSODEG00000015145	-	97	76.768	Octodon_degus
ENSCPBG00000014888	-	76	74.038	ENSODEG00000014911	-	93	74.038	Octodon_degus
ENSCPBG00000014888	-	99	71.324	ENSODEG00000017232	-	100	71.324	Octodon_degus
ENSCPBG00000014888	-	99	59.559	ENSODEG00000004346	-	100	59.559	Octodon_degus
ENSCPBG00000014888	-	98	72.388	ENSONIG00000008746	mrps17	90	72.388	Oreochromis_niloticus
ENSCPBG00000014888	-	99	74.265	ENSOCUG00000027419	-	100	74.265	Oryctolagus_cuniculus
ENSCPBG00000014888	-	99	74.265	ENSOCUG00000001767	-	95	74.265	Oryctolagus_cuniculus
ENSCPBG00000014888	-	99	74.265	ENSOCUG00000024077	-	100	74.265	Oryctolagus_cuniculus
ENSCPBG00000014888	-	99	74.074	ENSORLG00000002795	mrps17	90	74.074	Oryzias_latipes
ENSCPBG00000014888	-	99	74.074	ENSORLG00020016792	mrps17	90	74.074	Oryzias_latipes_hni
ENSCPBG00000014888	-	99	74.074	ENSORLG00015001149	mrps17	90	74.074	Oryzias_latipes_hsok
ENSCPBG00000014888	-	96	74.242	ENSOMEG00000009095	mrps17	92	73.881	Oryzias_melastigma
ENSCPBG00000014888	-	99	72.059	ENSOGAG00000010486	-	100	72.059	Otolemur_garnettii
ENSCPBG00000014888	-	99	65.441	ENSOGAG00000009088	-	100	65.441	Otolemur_garnettii
ENSCPBG00000014888	-	99	72.059	ENSOARG00000009925	-	88	72.059	Ovis_aries
ENSCPBG00000014888	-	99	74.265	ENSPPAG00000036712	-	100	74.265	Pan_paniscus
ENSCPBG00000014888	-	99	61.029	ENSPPAG00000038238	-	100	61.029	Pan_paniscus
ENSCPBG00000014888	-	97	74.436	ENSPPRG00000000525	-	98	74.436	Panthera_pardus
ENSCPBG00000014888	-	97	74.436	ENSPTIG00000019404	-	80	74.436	Panthera_tigris_altaica
ENSCPBG00000014888	-	99	67.647	ENSPTRG00000051838	-	100	67.647	Pan_troglodytes
ENSCPBG00000014888	-	99	74.265	ENSPTRG00000043904	-	100	74.265	Pan_troglodytes
ENSCPBG00000014888	-	99	62.500	ENSPTRG00000048604	-	100	62.500	Pan_troglodytes
ENSCPBG00000014888	-	99	74.265	ENSPTRG00000019203	MRPS17	100	74.265	Pan_troglodytes
ENSCPBG00000014888	-	99	69.118	ENSPTRG00000046133	-	94	69.118	Pan_troglodytes
ENSCPBG00000014888	-	87	60.504	ENSPANG00000030519	-	97	60.504	Papio_anubis
ENSCPBG00000014888	-	99	74.265	ENSPANG00000015285	-	100	74.265	Papio_anubis
ENSCPBG00000014888	-	96	65.909	ENSPKIG00000018389	mrps17	94	65.909	Paramormyrops_kingsleyae
ENSCPBG00000014888	-	100	98.540	ENSPSIG00000013261	-	100	98.540	Pelodiscus_sinensis
ENSCPBG00000014888	-	83	69.298	ENSPMAG00000006299	mrps17	74	69.298	Petromyzon_marinus
ENSCPBG00000014888	-	96	65.909	ENSPFOG00000010719	mrps17	90	65.672	Poecilia_formosa
ENSCPBG00000014888	-	96	65.909	ENSPLAG00000018054	mrps17	90	65.672	Poecilia_latipinna
ENSCPBG00000014888	-	96	65.909	ENSPMEG00000014029	mrps17	90	65.672	Poecilia_mexicana
ENSCPBG00000014888	-	98	65.672	ENSPREG00000009010	mrps17	92	65.672	Poecilia_reticulata
ENSCPBG00000014888	-	99	74.265	ENSPPYG00000017547	-	100	74.265	Pongo_abelii
ENSCPBG00000014888	-	99	72.059	ENSPCOG00000013668	-	100	72.059	Propithecus_coquereli
ENSCPBG00000014888	-	67	73.913	ENSPCOG00000000608	-	83	73.913	Propithecus_coquereli
ENSCPBG00000014888	-	99	72.059	ENSPVAG00000006305	-	99	72.059	Pteropus_vampyrus
ENSCPBG00000014888	-	98	74.627	ENSPNYG00000018693	mrps17	90	74.627	Pundamilia_nyererei
ENSCPBG00000014888	-	96	73.485	ENSPNAG00000015336	mrps17	80	72.593	Pygocentrus_nattereri
ENSCPBG00000014888	-	88	73.333	ENSRNOG00000000926	Mrps17	94	73.333	Rattus_norvegicus
ENSCPBG00000014888	-	99	64.234	ENSRNOG00000030847	AABR07012868.1	94	64.234	Rattus_norvegicus
ENSCPBG00000014888	-	98	75.373	ENSRBIG00000032287	-	99	75.373	Rhinopithecus_bieti
ENSCPBG00000014888	-	88	75.833	ENSRBIG00000032061	-	96	78.947	Rhinopithecus_bieti
ENSCPBG00000014888	-	99	74.265	ENSRROG00000000039	-	100	74.265	Rhinopithecus_roxellana
ENSCPBG00000014888	-	98	75.373	ENSRROG00000021955	-	99	75.373	Rhinopithecus_roxellana
ENSCPBG00000014888	-	99	72.794	ENSSBOG00000025889	-	100	72.794	Saimiri_boliviensis_boliviensis
ENSCPBG00000014888	-	99	55.147	ENSSBOG00000030322	-	100	55.147	Saimiri_boliviensis_boliviensis
ENSCPBG00000014888	-	94	64.341	ENSSBOG00000003355	-	94	64.341	Saimiri_boliviensis_boliviensis
ENSCPBG00000014888	-	98	66.418	ENSSHAG00000009749	-	99	66.418	Sarcophilus_harrisii
ENSCPBG00000014888	-	99	67.407	ENSSFOG00015006180	mrps17	92	67.407	Scleropages_formosus
ENSCPBG00000014888	-	98	71.642	ENSSMAG00000001680	mrps17	89	71.642	Scophthalmus_maximus
ENSCPBG00000014888	-	98	70.896	ENSSDUG00000017736	mrps17	90	70.896	Seriola_dumerili
ENSCPBG00000014888	-	98	70.896	ENSSLDG00000015517	mrps17	90	70.896	Seriola_lalandi_dorsalis
ENSCPBG00000014888	-	100	87.591	ENSSPUG00000002623	-	100	87.591	Sphenodon_punctatus
ENSCPBG00000014888	-	99	72.593	ENSSPAG00000008641	mrps17	90	72.593	Stegastes_partitus
ENSCPBG00000014888	-	95	66.923	ENSSSCG00000034769	-	89	72.973	Sus_scrofa
ENSCPBG00000014888	-	99	71.324	ENSSSCG00000007749	-	100	71.324	Sus_scrofa
ENSCPBG00000014888	-	100	88.321	ENSTGUG00000005052	MRPS17	100	88.321	Taeniopygia_guttata
ENSCPBG00000014888	-	96	69.697	ENSTRUG00000024068	mrps17	90	69.403	Takifugu_rubripes
ENSCPBG00000014888	-	98	70.149	ENSTNIG00000016121	mrps17	90	70.149	Tetraodon_nigroviridis
ENSCPBG00000014888	-	69	71.277	ENSTBEG00000007385	-	100	71.277	Tupaia_belangeri
ENSCPBG00000014888	-	99	71.324	ENSTTRG00000015139	-	100	71.324	Tursiops_truncatus
ENSCPBG00000014888	-	99	72.059	ENSUAMG00000002970	-	100	72.059	Ursus_americanus
ENSCPBG00000014888	-	99	71.324	ENSUMAG00000015822	-	100	71.324	Ursus_maritimus
ENSCPBG00000014888	-	99	72.059	ENSVVUG00000016664	-	100	72.059	Vulpes_vulpes
ENSCPBG00000014888	-	99	68.889	ENSXETG00000010088	mrps17	94	68.889	Xenopus_tropicalis
ENSCPBG00000014888	-	80	72.727	ENSXCOG00000009153	mrps17	86	72.727	Xiphophorus_couchianus
ENSCPBG00000014888	-	96	67.424	ENSXMAG00000007366	mrps17	90	67.164	Xiphophorus_maculatus