EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000014893 (Gene tree)
Gene ID: 101936763
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 6347 bases
Position: chrKK088184.1:8477546-8483892
Accession: 19440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000020724	SBDS	PF01172.18	3.4e-32	1	1
ENSCPBP00000020724	SBDS_C	PF09377.10	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024391	SBDS-201	753	-	ENSCPBP00000020724	250 (aa)	XP_005283500	UPI000388DF21

Gene Model

Click here to download ENSCPBG00000014893's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014893	SBDS	100	89.600	ENSG00000126524	SBDS	100	89.600	Homo_sapiens
ENSCPBG00000014893	SBDS	99	85.944	ENSAPOG00000014285	sbds	100	85.944	Acanthochromis_polyacanthus
ENSCPBG00000014893	SBDS	100	89.600	ENSAMEG00000018167	SBDS	100	89.600	Ailuropoda_melanoleuca
ENSCPBG00000014893	SBDS	99	85.714	ENSACIG00000007308	sbds	100	85.714	Amphilophus_citrinellus
ENSCPBG00000014893	SBDS	99	86.747	ENSAOCG00000016770	sbds	100	86.747	Amphiprion_ocellaris
ENSCPBG00000014893	SBDS	99	86.345	ENSAPEG00000015897	sbds	100	86.345	Amphiprion_percula
ENSCPBG00000014893	SBDS	99	86.747	ENSATEG00000006901	sbds	100	86.747	Anabas_testudineus
ENSCPBG00000014893	SBDS	92	82.684	ENSANAG00000024342	-	97	82.684	Aotus_nancymaae
ENSCPBG00000014893	SBDS	83	89.855	ENSANAG00000037501	-	100	89.855	Aotus_nancymaae
ENSCPBG00000014893	SBDS	99	86.747	ENSACLG00000018750	sbds	100	86.747	Astatotilapia_calliptera
ENSCPBG00000014893	SBDS	100	87.200	ENSAMXG00000005361	sbds	100	87.200	Astyanax_mexicanus
ENSCPBG00000014893	SBDS	100	90.000	ENSBTAG00000004051	SBDS	100	90.000	Bos_taurus
ENSCPBG00000014893	SBDS	98	58.130	WBGene00021063	sbds-1	97	58.130	Caenorhabditis_elegans
ENSCPBG00000014893	SBDS	100	89.600	ENSCJAG00000041007	SBDS	100	89.600	Callithrix_jacchus
ENSCPBG00000014893	SBDS	100	87.698	ENSCAFG00000010797	SBDS	100	87.698	Canis_familiaris
ENSCPBG00000014893	SBDS	100	89.600	ENSCAFG00020005357	SBDS	100	89.600	Canis_lupus_dingo
ENSCPBG00000014893	SBDS	100	90.000	ENSCHIG00000026854	SBDS	100	90.000	Capra_hircus
ENSCPBG00000014893	SBDS	100	89.600	ENSTSYG00000033822	SBDS	100	89.600	Carlito_syrichta
ENSCPBG00000014893	SBDS	66	92.073	ENSCAPG00000006634	SBDS	100	92.073	Cavia_aperea
ENSCPBG00000014893	SBDS	100	90.000	ENSCPOG00000036143	SBDS	100	90.000	Cavia_porcellus
ENSCPBG00000014893	SBDS	100	89.200	ENSCCAG00000020671	SBDS	100	89.200	Cebus_capucinus
ENSCPBG00000014893	SBDS	100	89.600	ENSCATG00000039026	SBDS	100	89.600	Cercocebus_atys
ENSCPBG00000014893	SBDS	100	90.400	ENSCLAG00000005721	-	100	90.400	Chinchilla_lanigera
ENSCPBG00000014893	SBDS	99	64.516	ENSCLAG00000002113	-	100	64.257	Chinchilla_lanigera
ENSCPBG00000014893	SBDS	100	89.600	ENSCSAG00000018275	SBDS	100	89.600	Chlorocebus_sabaeus
ENSCPBG00000014893	SBDS	100	84.800	ENSCHOG00000003795	SBDS	100	84.800	Choloepus_hoffmanni
ENSCPBG00000014893	SBDS	99	65.200	ENSCSAVG00000011811	-	100	65.200	Ciona_savignyi
ENSCPBG00000014893	SBDS	100	89.200	ENSCANG00000032368	SBDS	100	89.200	Colobus_angolensis_palliatus
ENSCPBG00000014893	SBDS	66	90.244	ENSCGRG00001019886	Sbds	100	90.244	Cricetulus_griseus_chok1gshd
ENSCPBG00000014893	SBDS	83	88.889	ENSCGRG00000009211	Sbds	100	88.889	Cricetulus_griseus_crigri
ENSCPBG00000014893	SBDS	99	85.141	ENSCSEG00000005798	sbds	100	85.141	Cynoglossus_semilaevis
ENSCPBG00000014893	SBDS	99	83.534	ENSCVAG00000001053	sbds	100	83.534	Cyprinodon_variegatus
ENSCPBG00000014893	SBDS	100	86.800	ENSDARG00000027803	sbds	100	86.800	Danio_rerio
ENSCPBG00000014893	SBDS	100	89.600	ENSDNOG00000041174	SBDS	100	89.600	Dasypus_novemcinctus
ENSCPBG00000014893	SBDS	100	88.800	ENSDORG00000026218	Sbds	100	88.800	Dipodomys_ordii
ENSCPBG00000014893	SBDS	90	60.526	FBgn0035714	CG8549	99	60.643	Drosophila_melanogaster
ENSCPBG00000014893	SBDS	93	60.086	ENSEBUG00000015780	sbds	100	60.086	Eptatretus_burgeri
ENSCPBG00000014893	SBDS	100	89.600	ENSEASG00005008821	SBDS	100	89.600	Equus_asinus_asinus
ENSCPBG00000014893	SBDS	100	89.600	ENSECAG00000008202	SBDS	100	89.600	Equus_caballus
ENSCPBG00000014893	SBDS	83	69.712	ENSEEUG00000004768	SBDS	100	69.712	Erinaceus_europaeus
ENSCPBG00000014893	SBDS	100	84.400	ENSELUG00000008382	sbds	100	84.400	Esox_lucius
ENSCPBG00000014893	SBDS	100	89.200	ENSFCAG00000022142	SBDS	100	89.200	Felis_catus
ENSCPBG00000014893	SBDS	100	94.800	ENSFALG00000013808	SBDS	100	94.800	Ficedula_albicollis
ENSCPBG00000014893	SBDS	100	90.000	ENSFDAG00000018947	-	100	90.000	Fukomys_damarensis
ENSCPBG00000014893	SBDS	99	81.928	ENSFHEG00000000708	sbds	99	82.591	Fundulus_heteroclitus
ENSCPBG00000014893	SBDS	100	84.800	ENSGMOG00000018356	sbds	99	84.800	Gadus_morhua
ENSCPBG00000014893	SBDS	100	93.600	ENSGALG00000027989	SBDS	100	93.600	Gallus_gallus
ENSCPBG00000014893	SBDS	92	82.533	ENSGAFG00000014204	sbds	99	82.533	Gambusia_affinis
ENSCPBG00000014893	SBDS	99	83.936	ENSGACG00000012697	sbds	100	83.936	Gasterosteus_aculeatus
ENSCPBG00000014893	SBDS	86	98.598	ENSGAGG00000022402	SBDS	100	98.598	Gopherus_agassizii
ENSCPBG00000014893	SBDS	96	70.954	ENSGGOG00000040023	-	92	70.954	Gorilla_gorilla
ENSCPBG00000014893	SBDS	99	86.747	ENSHBUG00000002660	sbds	100	86.747	Haplochromis_burtoni
ENSCPBG00000014893	SBDS	100	88.400	ENSHGLG00000009671	SBDS	100	88.400	Heterocephalus_glaber_female
ENSCPBG00000014893	SBDS	100	88.400	ENSHGLG00100011332	SBDS	100	88.400	Heterocephalus_glaber_male
ENSCPBG00000014893	SBDS	99	82.731	ENSHCOG00000018606	sbds	100	82.731	Hippocampus_comes
ENSCPBG00000014893	SBDS	100	88.000	ENSIPUG00000006536	sbds	100	88.000	Ictalurus_punctatus
ENSCPBG00000014893	SBDS	100	86.400	ENSJJAG00000012033	-	100	86.400	Jaculus_jaculus
ENSCPBG00000014893	SBDS	100	63.241	ENSJJAG00000003934	-	100	63.241	Jaculus_jaculus
ENSCPBG00000014893	SBDS	99	86.747	ENSKMAG00000018542	sbds	100	86.747	Kryptolebias_marmoratus
ENSCPBG00000014893	SBDS	99	84.337	ENSLBEG00000016687	sbds	100	84.337	Labrus_bergylta
ENSCPBG00000014893	SBDS	100	74.803	ENSLACG00000018916	SBDS	100	74.803	Latimeria_chalumnae
ENSCPBG00000014893	SBDS	100	91.600	ENSLOCG00000004073	sbds	100	91.600	Lepisosteus_oculatus
ENSCPBG00000014893	SBDS	100	88.800	ENSLAFG00000008763	SBDS	100	88.800	Loxodonta_africana
ENSCPBG00000014893	SBDS	100	89.600	ENSMFAG00000032620	SBDS	100	89.600	Macaca_fascicularis
ENSCPBG00000014893	SBDS	100	89.600	ENSMMUG00000045653	SBDS	100	89.600	Macaca_mulatta
ENSCPBG00000014893	SBDS	100	89.600	ENSMNEG00000031523	SBDS	100	89.600	Macaca_nemestrina
ENSCPBG00000014893	SBDS	100	68.898	ENSMLEG00000036826	SBDS	100	68.898	Mandrillus_leucophaeus
ENSCPBG00000014893	SBDS	99	85.141	ENSMAMG00000016062	sbds	100	85.141	Mastacembelus_armatus
ENSCPBG00000014893	SBDS	99	86.747	ENSMZEG00005024385	sbds	100	86.747	Maylandia_zebra
ENSCPBG00000014893	SBDS	100	93.600	ENSMGAG00000002119	SBDS	100	93.600	Meleagris_gallopavo
ENSCPBG00000014893	SBDS	99	70.683	ENSMAUG00000022214	-	100	70.683	Mesocricetus_auratus
ENSCPBG00000014893	SBDS	100	90.000	ENSMICG00000014366	SBDS	100	90.000	Microcebus_murinus
ENSCPBG00000014893	SBDS	100	89.200	ENSMOCG00000011739	Sbds	100	89.200	Microtus_ochrogaster
ENSCPBG00000014893	SBDS	99	76.400	ENSMMOG00000005061	sbds	100	76.000	Mola_mola
ENSCPBG00000014893	SBDS	100	91.200	ENSMODG00000006644	SBDS	100	91.200	Monodelphis_domestica
ENSCPBG00000014893	SBDS	99	85.944	ENSMALG00000010219	sbds	100	85.944	Monopterus_albus
ENSCPBG00000014893	SBDS	100	89.200	MGP_CAROLIEiJ_G0027800	Sbds	100	89.200	Mus_caroli
ENSCPBG00000014893	SBDS	100	88.800	ENSMUSG00000025337	Sbds	100	88.800	Mus_musculus
ENSCPBG00000014893	SBDS	100	89.200	MGP_PahariEiJ_G0024384	Sbds	100	89.200	Mus_pahari
ENSCPBG00000014893	SBDS	100	88.800	MGP_SPRETEiJ_G0028798	Sbds	100	88.800	Mus_spretus
ENSCPBG00000014893	SBDS	67	87.500	ENSMPUG00000016192	SBDS	97	87.500	Mustela_putorius_furo
ENSCPBG00000014893	SBDS	73	88.462	ENSMLUG00000013575	SBDS	100	88.462	Myotis_lucifugus
ENSCPBG00000014893	SBDS	100	89.200	ENSNGAG00000012093	Sbds	100	89.200	Nannospalax_galili
ENSCPBG00000014893	SBDS	99	86.747	ENSNBRG00000017027	sbds	100	86.747	Neolamprologus_brichardi
ENSCPBG00000014893	SBDS	100	89.600	ENSNLEG00000013288	SBDS	100	89.600	Nomascus_leucogenys
ENSCPBG00000014893	SBDS	100	87.600	ENSOPRG00000008721	SBDS	100	87.600	Ochotona_princeps
ENSCPBG00000014893	SBDS	99	71.084	ENSODEG00000001116	-	99	71.084	Octodon_degus
ENSCPBG00000014893	SBDS	99	67.068	ENSODEG00000000137	-	85	70.000	Octodon_degus
ENSCPBG00000014893	SBDS	100	80.400	ENSODEG00000019253	-	84	80.400	Octodon_degus
ENSCPBG00000014893	SBDS	99	85.944	ENSONIG00000005874	sbds	100	85.944	Oreochromis_niloticus
ENSCPBG00000014893	SBDS	83	86.957	ENSOANG00000007674	-	100	86.957	Ornithorhynchus_anatinus
ENSCPBG00000014893	SBDS	100	88.800	ENSOCUG00000003170	SBDS	100	88.800	Oryctolagus_cuniculus
ENSCPBG00000014893	SBDS	99	84.337	ENSORLG00000023489	sbds	100	84.337	Oryzias_latipes
ENSCPBG00000014893	SBDS	99	83.936	ENSORLG00020019282	sbds	100	83.936	Oryzias_latipes_hni
ENSCPBG00000014893	SBDS	99	83.936	ENSORLG00015008005	sbds	100	83.936	Oryzias_latipes_hsok
ENSCPBG00000014893	SBDS	99	83.936	ENSOMEG00000022747	sbds	100	83.936	Oryzias_melastigma
ENSCPBG00000014893	SBDS	100	74.400	ENSOGAG00000015036	-	100	74.400	Otolemur_garnettii
ENSCPBG00000014893	SBDS	100	89.600	ENSOGAG00000009011	-	100	89.600	Otolemur_garnettii
ENSCPBG00000014893	SBDS	100	90.000	ENSOARG00000010609	SBDS	100	90.000	Ovis_aries
ENSCPBG00000014893	SBDS	100	88.800	ENSPPAG00000043889	-	100	88.800	Pan_paniscus
ENSCPBG00000014893	SBDS	100	89.200	ENSPPRG00000002307	SBDS	100	89.200	Panthera_pardus
ENSCPBG00000014893	SBDS	100	89.200	ENSPTIG00000021308	SBDS	100	89.200	Panthera_tigris_altaica
ENSCPBG00000014893	SBDS	100	76.400	ENSPTRG00000047744	-	100	76.400	Pan_troglodytes
ENSCPBG00000014893	SBDS	87	86.636	ENSPTRG00000048174	-	96	86.636	Pan_troglodytes
ENSCPBG00000014893	SBDS	100	89.600	ENSPTRG00000019254	SBDS	100	89.600	Pan_troglodytes
ENSCPBG00000014893	SBDS	100	76.400	ENSPTRG00000050835	-	100	76.400	Pan_troglodytes
ENSCPBG00000014893	SBDS	100	89.200	ENSPANG00000004078	SBDS	100	89.200	Papio_anubis
ENSCPBG00000014893	SBDS	100	88.800	ENSPKIG00000006489	sbds	100	88.800	Paramormyrops_kingsleyae
ENSCPBG00000014893	SBDS	83	96.635	ENSPSIG00000014603	SBDS	100	96.635	Pelodiscus_sinensis
ENSCPBG00000014893	SBDS	99	84.739	ENSPMGG00000004246	sbds	100	84.739	Periophthalmus_magnuspinnatus
ENSCPBG00000014893	SBDS	100	89.200	ENSPEMG00000008728	Sbds	100	89.200	Peromyscus_maniculatus_bairdii
ENSCPBG00000014893	SBDS	100	90.000	ENSPCIG00000029718	SBDS	100	90.000	Phascolarctos_cinereus
ENSCPBG00000014893	SBDS	99	83.936	ENSPFOG00000015837	sbds	100	83.936	Poecilia_formosa
ENSCPBG00000014893	SBDS	99	84.337	ENSPLAG00000003641	sbds	100	84.337	Poecilia_latipinna
ENSCPBG00000014893	SBDS	99	83.936	ENSPMEG00000019483	sbds	100	83.936	Poecilia_mexicana
ENSCPBG00000014893	SBDS	99	83.936	ENSPREG00000018758	sbds	100	83.936	Poecilia_reticulata
ENSCPBG00000014893	SBDS	100	89.600	ENSPPYG00000017513	SBDS	100	89.600	Pongo_abelii
ENSCPBG00000014893	SBDS	100	89.600	ENSPCOG00000021098	SBDS	100	89.600	Propithecus_coquereli
ENSCPBG00000014893	SBDS	100	89.200	ENSPVAG00000009369	SBDS	100	89.200	Pteropus_vampyrus
ENSCPBG00000014893	SBDS	99	86.345	ENSPNYG00000022403	sbds	100	86.345	Pundamilia_nyererei
ENSCPBG00000014893	SBDS	100	87.200	ENSPNAG00000001120	sbds	100	87.200	Pygocentrus_nattereri
ENSCPBG00000014893	SBDS	100	88.800	ENSRNOG00000000888	Sbds	100	88.800	Rattus_norvegicus
ENSCPBG00000014893	SBDS	100	89.600	ENSRBIG00000035557	SBDS	100	89.600	Rhinopithecus_bieti
ENSCPBG00000014893	SBDS	100	89.600	ENSRROG00000040842	-	100	89.600	Rhinopithecus_roxellana
ENSCPBG00000014893	SBDS	100	72.400	ENSRROG00000041986	-	100	70.000	Rhinopithecus_roxellana
ENSCPBG00000014893	SBDS	96	42.683	YLR022C	-	71	48.023	Saccharomyces_cerevisiae
ENSCPBG00000014893	SBDS	93	87.931	ENSSBOG00000022460	SBDS	100	87.931	Saimiri_boliviensis_boliviensis
ENSCPBG00000014893	SBDS	100	80.800	ENSSHAG00000010263	SBDS	100	80.800	Sarcophilus_harrisii
ENSCPBG00000014893	SBDS	100	91.200	ENSSFOG00015001108	sbds	100	91.200	Scleropages_formosus
ENSCPBG00000014893	SBDS	99	85.944	ENSSMAG00000020506	sbds	100	85.944	Scophthalmus_maximus
ENSCPBG00000014893	SBDS	99	85.141	ENSSDUG00000001528	sbds	100	85.141	Seriola_dumerili
ENSCPBG00000014893	SBDS	99	85.542	ENSSLDG00000003659	sbds	100	85.542	Seriola_lalandi_dorsalis
ENSCPBG00000014893	SBDS	73	85.882	ENSSARG00000001899	-	73	85.882	Sorex_araneus
ENSCPBG00000014893	SBDS	61	88.889	ENSSARG00000013132	-	100	88.889	Sorex_araneus
ENSCPBG00000014893	SBDS	100	94.000	ENSSPUG00000002699	SBDS	100	94.000	Sphenodon_punctatus
ENSCPBG00000014893	SBDS	99	85.944	ENSSPAG00000016419	sbds	100	79.200	Stegastes_partitus
ENSCPBG00000014893	SBDS	100	90.000	ENSSSCG00000007732	SBDS	100	90.000	Sus_scrofa
ENSCPBG00000014893	SBDS	66	95.122	ENSTGUG00000003426	SBDS	99	95.122	Taeniopygia_guttata
ENSCPBG00000014893	SBDS	99	85.944	ENSTRUG00000021443	sbds	100	85.944	Takifugu_rubripes
ENSCPBG00000014893	SBDS	99	84.739	ENSTNIG00000019000	sbds	100	84.739	Tetraodon_nigroviridis
ENSCPBG00000014893	SBDS	83	74.519	ENSTBEG00000001178	SBDS	100	74.519	Tupaia_belangeri
ENSCPBG00000014893	SBDS	100	70.400	ENSTTRG00000003921	SBDS	100	70.400	Tursiops_truncatus
ENSCPBG00000014893	SBDS	100	89.600	ENSUAMG00000001326	SBDS	100	89.600	Ursus_americanus
ENSCPBG00000014893	SBDS	100	89.600	ENSUMAG00000015353	SBDS	100	89.600	Ursus_maritimus
ENSCPBG00000014893	SBDS	100	89.600	ENSVVUG00000016478	SBDS	100	89.600	Vulpes_vulpes
ENSCPBG00000014893	SBDS	100	88.400	ENSXETG00000010093	sbds	100	88.400	Xenopus_tropicalis
ENSCPBG00000014893	SBDS	99	75.100	ENSXCOG00000010639	sbds	100	75.100	Xiphophorus_couchianus
ENSCPBG00000014893	SBDS	99	84.739	ENSXMAG00000006065	sbds	100	84.739	Xiphophorus_maculatus