EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000014995 (Gene tree)
Gene ID: 101934190
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 21290 bases
Position: chrKK083026.1:228369-249658
Accession: 15924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000020861	zf-C2H2	PF00096.26	1.5e-27	1	6
ENSCPBP00000020861	zf-C2H2	PF00096.26	1.5e-27	2	6
ENSCPBP00000020861	zf-C2H2	PF00096.26	1.5e-27	3	6
ENSCPBP00000020861	zf-C2H2	PF00096.26	1.5e-27	4	6
ENSCPBP00000020861	zf-C2H2	PF00096.26	1.5e-27	5	6
ENSCPBP00000020861	zf-C2H2	PF00096.26	1.5e-27	6	6
ENSCPBP00000020860	zf-C2H2	PF00096.26	2e-27	1	6
ENSCPBP00000020860	zf-C2H2	PF00096.26	2e-27	2	6
ENSCPBP00000020860	zf-C2H2	PF00096.26	2e-27	3	6
ENSCPBP00000020860	zf-C2H2	PF00096.26	2e-27	4	6
ENSCPBP00000020860	zf-C2H2	PF00096.26	2e-27	5	6
ENSCPBP00000020860	zf-C2H2	PF00096.26	2e-27	6	6
ENSCPBP00000020861	zf-met	PF12874.7	7.1e-16	1	1
ENSCPBP00000020860	zf-met	PF12874.7	9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024564	SALL4-202	4623	-	ENSCPBP00000020861	1069 (aa)	XP_005284232	UPI000388BCB7
ENSCPBT00000024562	SALL4-201	4428	-	ENSCPBP00000020860	1105 (aa)	XP_005284231	UPI000388AD6A

Gene Model

Click here to download ENSCPBG00000014995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000014995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000014995	SALL4	100	63.462	ENSCPBG00000015924	SALL1	84	72.222
ENSCPBG00000014995	SALL4	99	63.462	ENSCPBG00000003657	SALL3	92	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000014995	SALL4	99	59.349	ENSG00000101115	SALL4	100	67.078	Homo_sapiens
ENSCPBG00000014995	SALL4	100	51.553	ENSAPOG00000002465	sall4	99	51.330	Acanthochromis_polyacanthus
ENSCPBG00000014995	SALL4	100	59.502	ENSAMEG00000013250	-	99	59.246	Ailuropoda_melanoleuca
ENSCPBG00000014995	SALL4	99	51.471	ENSACIG00000017298	sall4	99	51.150	Amphilophus_citrinellus
ENSCPBG00000014995	SALL4	100	52.385	ENSAOCG00000023678	sall4	99	52.259	Amphiprion_ocellaris
ENSCPBG00000014995	SALL4	100	52.385	ENSAPEG00000000751	sall4	99	52.259	Amphiprion_percula
ENSCPBG00000014995	SALL4	99	52.285	ENSATEG00000024480	sall4	99	52.074	Anabas_testudineus
ENSCPBG00000014995	SALL4	100	88.559	ENSAPLG00000006498	SALL4	100	88.559	Anas_platyrhynchos
ENSCPBG00000014995	SALL4	100	75.970	ENSACAG00000012748	SALL4	99	75.000	Anolis_carolinensis
ENSCPBG00000014995	SALL4	99	58.364	ENSANAG00000023352	SALL4	100	56.804	Aotus_nancymaae
ENSCPBG00000014995	SALL4	99	52.530	ENSACLG00000017851	sall4	99	52.212	Astatotilapia_calliptera
ENSCPBG00000014995	SALL4	99	55.266	ENSAMXG00000001254	sall4	99	55.204	Astyanax_mexicanus
ENSCPBG00000014995	SALL4	99	54.680	ENSBTAG00000003101	SALL4	100	53.450	Bos_taurus
ENSCPBG00000014995	SALL4	86	59.047	ENSCJAG00000000591	SALL4	99	58.613	Callithrix_jacchus
ENSCPBG00000014995	SALL4	100	59.222	ENSCAFG00000011738	-	100	57.932	Canis_familiaris
ENSCPBG00000014995	SALL4	100	59.129	ENSCAFG00020021870	SALL4	100	57.932	Canis_lupus_dingo
ENSCPBG00000014995	SALL4	99	54.596	ENSCHIG00000026270	SALL4	100	53.362	Capra_hircus
ENSCPBG00000014995	SALL4	100	55.263	ENSTSYG00000007359	SALL4	100	67.490	Carlito_syrichta
ENSCPBG00000014995	SALL4	99	54.839	ENSCAPG00000012135	SALL4	97	53.749	Cavia_aperea
ENSCPBG00000014995	SALL4	100	52.941	ENSCCAG00000029512	-	100	64.706	Cebus_capucinus
ENSCPBG00000014995	SALL4	99	59.070	ENSCATG00000030757	SALL4	100	57.469	Cercocebus_atys
ENSCPBG00000014995	SALL4	100	55.088	ENSCLAG00000010479	SALL4	100	55.439	Chinchilla_lanigera
ENSCPBG00000014995	SALL4	99	58.884	ENSCSAG00000015269	SALL4	100	57.206	Chlorocebus_sabaeus
ENSCPBG00000014995	SALL4	99	58.698	ENSCANG00000036463	SALL4	100	57.030	Colobus_angolensis_palliatus
ENSCPBG00000014995	SALL4	100	52.402	ENSCGRG00001019569	Sall4	100	57.692	Cricetulus_griseus_chok1gshd
ENSCPBG00000014995	SALL4	100	52.227	ENSCGRG00000000462	Sall4	98	77.778	Cricetulus_griseus_crigri
ENSCPBG00000014995	SALL4	99	50.914	ENSCSEG00000014604	sall4	99	51.230	Cynoglossus_semilaevis
ENSCPBG00000014995	SALL4	99	50.226	ENSCVAG00000010815	sall4	99	50.789	Cyprinodon_variegatus
ENSCPBG00000014995	SALL4	99	54.968	ENSDARG00000044485	sall4	99	54.273	Danio_rerio
ENSCPBG00000014995	SALL4	99	58.627	ENSDNOG00000040633	SALL4	100	57.068	Dasypus_novemcinctus
ENSCPBG00000014995	SALL4	100	50.798	ENSDORG00000012841	Sall4	100	83.333	Dipodomys_ordii
ENSCPBG00000014995	SALL4	73	68.000	ENSETEG00000012475	-	64	68.000	Echinops_telfairi
ENSCPBG00000014995	SALL4	76	61.538	ENSEBUG00000015425	-	56	63.380	Eptatretus_burgeri
ENSCPBG00000014995	SALL4	100	58.611	ENSECAG00000018533	SALL4	100	57.143	Equus_caballus
ENSCPBG00000014995	SALL4	99	56.970	ENSEEUG00000003649	SALL4	99	56.201	Erinaceus_europaeus
ENSCPBG00000014995	SALL4	99	52.007	ENSELUG00000005696	sall4	99	51.385	Esox_lucius
ENSCPBG00000014995	SALL4	100	56.562	ENSFCAG00000002822	SALL4	100	55.039	Felis_catus
ENSCPBG00000014995	SALL4	100	82.464	ENSFALG00000013149	SALL4	100	82.554	Ficedula_albicollis
ENSCPBG00000014995	SALL4	100	55.624	ENSFDAG00000017812	SALL4	100	56.151	Fukomys_damarensis
ENSCPBG00000014995	SALL4	99	52.589	ENSFHEG00000014187	sall4	99	52.205	Fundulus_heteroclitus
ENSCPBG00000014995	SALL4	99	51.071	ENSGMOG00000003822	sall4	99	51.071	Gadus_morhua
ENSCPBG00000014995	SALL4	100	85.676	ENSGALG00000041365	SALL4	100	85.676	Gallus_gallus
ENSCPBG00000014995	SALL4	99	51.376	ENSGAFG00000019925	sall4	99	51.590	Gambusia_affinis
ENSCPBG00000014995	SALL4	99	50.872	ENSGACG00000011124	sall4	99	50.843	Gasterosteus_aculeatus
ENSCPBG00000014995	SALL4	100	97.763	ENSGAGG00000002297	SALL4	100	97.746	Gopherus_agassizii
ENSCPBG00000014995	SALL4	99	59.256	ENSGGOG00000001832	SALL4	100	57.557	Gorilla_gorilla
ENSCPBG00000014995	SALL4	99	52.530	ENSHBUG00000007327	sall4	99	52.212	Haplochromis_burtoni
ENSCPBG00000014995	SALL4	99	56.175	ENSHGLG00000009043	SALL4	97	55.474	Heterocephalus_glaber_female
ENSCPBG00000014995	SALL4	99	56.082	ENSHGLG00100002722	SALL4	97	55.383	Heterocephalus_glaber_male
ENSCPBG00000014995	SALL4	99	51.865	ENSHCOG00000008519	sall4	99	51.644	Hippocampus_comes
ENSCPBG00000014995	SALL4	99	56.410	ENSIPUG00000019170	sall4	99	56.460	Ictalurus_punctatus
ENSCPBG00000014995	SALL4	64	64.490	ENSSTOG00000025002	SALL4	98	85.915	Ictidomys_tridecemlineatus
ENSCPBG00000014995	SALL4	100	56.255	ENSJJAG00000020688	Sall4	98	87.324	Jaculus_jaculus
ENSCPBG00000014995	SALL4	99	52.515	ENSKMAG00000002501	sall4	99	52.650	Kryptolebias_marmoratus
ENSCPBG00000014995	SALL4	99	51.651	ENSLBEG00000019951	sall4	99	51.550	Labrus_bergylta
ENSCPBG00000014995	SALL4	99	61.368	ENSLACG00000013898	SALL4	100	69.841	Latimeria_chalumnae
ENSCPBG00000014995	SALL4	99	58.748	ENSLOCG00000002427	sall4	99	58.771	Lepisosteus_oculatus
ENSCPBG00000014995	SALL4	100	56.437	ENSLAFG00000004309	SALL4	100	56.526	Loxodonta_africana
ENSCPBG00000014995	SALL4	99	58.977	ENSMFAG00000027169	SALL4	100	57.293	Macaca_fascicularis
ENSCPBG00000014995	SALL4	96	58.012	ENSMMUG00000003870	SALL4	100	65.844	Macaca_mulatta
ENSCPBG00000014995	SALL4	96	58.012	ENSMNEG00000035995	SALL4	100	57.529	Macaca_nemestrina
ENSCPBG00000014995	SALL4	99	58.977	ENSMLEG00000030467	SALL4	100	57.293	Mandrillus_leucophaeus
ENSCPBG00000014995	SALL4	99	52.080	ENSMAMG00000005223	sall4	99	51.655	Mastacembelus_armatus
ENSCPBG00000014995	SALL4	99	52.530	ENSMZEG00005023418	sall4	99	52.212	Maylandia_zebra
ENSCPBG00000014995	SALL4	75	84.893	ENSMGAG00000009344	SALL4	100	83.801	Meleagris_gallopavo
ENSCPBG00000014995	SALL4	100	52.340	ENSMAUG00000015814	Sall4	98	74.699	Mesocricetus_auratus
ENSCPBG00000014995	SALL4	99	58.480	ENSMICG00000000027	SALL4	100	57.068	Microcebus_murinus
ENSCPBG00000014995	SALL4	100	54.127	ENSMOCG00000018245	Sall4	98	84.932	Microtus_ochrogaster
ENSCPBG00000014995	SALL4	99	51.664	ENSMMOG00000014929	sall4	99	51.337	Mola_mola
ENSCPBG00000014995	SALL4	99	73.660	ENSMODG00000016387	SALL4	97	72.227	Monodelphis_domestica
ENSCPBG00000014995	SALL4	99	52.608	ENSMALG00000018709	sall4	99	52.250	Monopterus_albus
ENSCPBG00000014995	SALL4	100	52.522	MGP_CAROLIEiJ_G0024723	Sall4	98	87.500	Mus_caroli
ENSCPBG00000014995	SALL4	100	52.526	ENSMUSG00000027547	Sall4	98	87.500	Mus_musculus
ENSCPBG00000014995	SALL4	100	51.935	MGP_PahariEiJ_G0026164	Sall4	98	87.500	Mus_pahari
ENSCPBG00000014995	SALL4	100	52.526	MGP_SPRETEiJ_G0025643	Sall4	98	87.500	Mus_spretus
ENSCPBG00000014995	SALL4	100	57.802	ENSMPUG00000017543	SALL4	96	56.769	Mustela_putorius_furo
ENSCPBG00000014995	SALL4	100	53.441	ENSMLUG00000008405	-	100	53.083	Myotis_lucifugus
ENSCPBG00000014995	SALL4	99	57.846	ENSMLUG00000007060	-	100	57.065	Myotis_lucifugus
ENSCPBG00000014995	SALL4	99	42.484	ENSMLUG00000028073	-	99	42.034	Myotis_lucifugus
ENSCPBG00000014995	SALL4	100	55.507	ENSNGAG00000017833	Sall4	100	55.330	Nannospalax_galili
ENSCPBG00000014995	SALL4	99	52.530	ENSNBRG00000001829	sall4	99	52.212	Neolamprologus_brichardi
ENSCPBG00000014995	SALL4	99	58.977	ENSNLEG00000007013	SALL4	100	57.293	Nomascus_leucogenys
ENSCPBG00000014995	SALL4	87	68.348	ENSMEUG00000005793	-	99	67.230	Notamacropus_eugenii
ENSCPBG00000014995	SALL4	100	56.294	ENSOPRG00000011640	SALL4	100	55.944	Ochotona_princeps
ENSCPBG00000014995	SALL4	99	52.482	ENSONIG00000016557	sall4	99	53.050	Oreochromis_niloticus
ENSCPBG00000014995	SALL4	100	78.366	ENSOANG00000008667	SALL4	97	77.431	Ornithorhynchus_anatinus
ENSCPBG00000014995	SALL4	99	57.488	ENSOCUG00000011797	SALL4	100	56.673	Oryctolagus_cuniculus
ENSCPBG00000014995	SALL4	99	50.694	ENSORLG00000016130	sall4	99	49.823	Oryzias_latipes
ENSCPBG00000014995	SALL4	99	50.179	ENSORLG00020007339	sall4	99	49.823	Oryzias_latipes_hni
ENSCPBG00000014995	SALL4	99	50.412	ENSORLG00015002265	sall4	99	50.088	Oryzias_latipes_hsok
ENSCPBG00000014995	SALL4	99	51.366	ENSOMEG00000017344	sall4	99	51.010	Oryzias_melastigma
ENSCPBG00000014995	SALL4	100	59.667	ENSOGAG00000013799	SALL4	100	59.242	Otolemur_garnettii
ENSCPBG00000014995	SALL4	100	51.408	ENSOARG00000014570	SALL4	100	51.232	Ovis_aries
ENSCPBG00000014995	SALL4	99	59.163	ENSPPAG00000038064	SALL4	100	57.469	Pan_paniscus
ENSCPBG00000014995	SALL4	100	55.906	ENSPPRG00000008677	SALL4	100	55.429	Panthera_pardus
ENSCPBG00000014995	SALL4	99	59.163	ENSPTRG00000013631	SALL4	100	57.645	Pan_troglodytes
ENSCPBG00000014995	SALL4	96	58.012	ENSPANG00000021792	SALL4	100	57.529	Papio_anubis
ENSCPBG00000014995	SALL4	99	56.228	ENSPKIG00000007074	sall4	99	56.228	Paramormyrops_kingsleyae
ENSCPBG00000014995	SALL4	100	94.139	ENSPSIG00000009066	SALL4	100	94.139	Pelodiscus_sinensis
ENSCPBG00000014995	SALL4	99	50.508	ENSPMGG00000022551	sall4	99	50.223	Periophthalmus_magnuspinnatus
ENSCPBG00000014995	SALL4	100	54.847	ENSPEMG00000022706	Sall4	98	87.500	Peromyscus_maniculatus_bairdii
ENSCPBG00000014995	SALL4	99	76.411	ENSPCIG00000022838	SALL4	97	74.738	Phascolarctos_cinereus
ENSCPBG00000014995	SALL4	99	51.913	ENSPFOG00000001442	sall4	99	51.888	Poecilia_formosa
ENSCPBG00000014995	SALL4	99	51.821	ENSPLAG00000008760	sall4	99	51.800	Poecilia_latipinna
ENSCPBG00000014995	SALL4	99	52.333	ENSPMEG00000008497	sall4	99	52.032	Poecilia_mexicana
ENSCPBG00000014995	SALL4	100	51.989	ENSPREG00000021140	sall4	99	52.035	Poecilia_reticulata
ENSCPBG00000014995	SALL4	99	59.070	ENSPPYG00000011138	SALL4	100	57.293	Pongo_abelii
ENSCPBG00000014995	SALL4	100	54.032	ENSPCAG00000004726	SALL4	99	53.772	Procavia_capensis
ENSCPBG00000014995	SALL4	99	58.550	ENSPCOG00000016321	SALL4	100	57.256	Propithecus_coquereli
ENSCPBG00000014995	SALL4	93	56.874	ENSPVAG00000002075	SALL4	94	55.690	Pteropus_vampyrus
ENSCPBG00000014995	SALL4	99	52.254	ENSPNYG00000021738	sall4	99	51.947	Pundamilia_nyererei
ENSCPBG00000014995	SALL4	99	56.633	ENSPNAG00000020929	sall4	99	56.537	Pygocentrus_nattereri
ENSCPBG00000014995	SALL4	100	52.682	ENSRNOG00000050035	Sall4	100	63.462	Rattus_norvegicus
ENSCPBG00000014995	SALL4	99	58.791	ENSRBIG00000039876	SALL4	100	57.336	Rhinopithecus_bieti
ENSCPBG00000014995	SALL4	99	58.791	ENSRROG00000036585	SALL4	100	57.118	Rhinopithecus_roxellana
ENSCPBG00000014995	SALL4	100	57.682	ENSSBOG00000030011	SALL4	100	57.331	Saimiri_boliviensis_boliviensis
ENSCPBG00000014995	SALL4	97	82.407	ENSSHAG00000018013	SALL4	89	82.710	Sarcophilus_harrisii
ENSCPBG00000014995	SALL4	99	54.222	ENSSFOG00015021075	sall4	99	54.222	Scleropages_formosus
ENSCPBG00000014995	SALL4	99	52.636	ENSSMAG00000019218	sall4	99	52.327	Scophthalmus_maximus
ENSCPBG00000014995	SALL4	99	52.732	ENSSDUG00000004657	sall4	99	52.247	Seriola_dumerili
ENSCPBG00000014995	SALL4	99	53.388	ENSSLDG00000004973	sall4	99	52.702	Seriola_lalandi_dorsalis
ENSCPBG00000014995	SALL4	99	51.901	ENSSPAG00000001978	sall4	99	51.636	Stegastes_partitus
ENSCPBG00000014995	SALL4	100	56.491	ENSSSCG00000007479	SALL4	100	56.140	Sus_scrofa
ENSCPBG00000014995	SALL4	99	52.030	ENSTRUG00000007410	sall4	99	51.687	Takifugu_rubripes
ENSCPBG00000014995	SALL4	99	52.271	ENSTNIG00000012460	sall4	99	51.957	Tetraodon_nigroviridis
ENSCPBG00000014995	SALL4	99	54.833	ENSTTRG00000007753	SALL4	100	53.973	Tursiops_truncatus
ENSCPBG00000014995	SALL4	100	58.249	ENSUAMG00000010113	SALL4	100	57.068	Ursus_americanus
ENSCPBG00000014995	SALL4	100	57.523	ENSUMAG00000024274	SALL4	99	57.001	Ursus_maritimus
ENSCPBG00000014995	SALL4	100	64.658	ENSXETG00000012326	sall4	99	64.716	Xenopus_tropicalis
ENSCPBG00000014995	SALL4	99	48.396	ENSXCOG00000015467	sall4	99	48.181	Xiphophorus_couchianus
ENSCPBG00000014995	SALL4	99	48.084	ENSXMAG00000012692	sall4	99	47.611	Xiphophorus_maculatus