EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000015089 (Gene tree)
Gene ID: 101943242
Gene Symbol: FANCM
Alias: FAAP250|KIAA1596
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 135711 bases
Position: chrKK082994.1:3037943-3173653
Accession: 23168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000021013	ResIII	PF04851.15	1e-19	1	1
ENSCPBP00000021010	ResIII	PF04851.15	1e-19	1	1
ENSCPBP00000021009	ResIII	PF04851.15	1.1e-19	1	1
ENSCPBP00000021013	DEAD	PF00270.29	3.5e-17	1	1
ENSCPBP00000021009	DEAD	PF00270.29	3.7e-17	1	1
ENSCPBP00000021010	DEAD	PF00270.29	4.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000024737	FANCM-201	6229	XM_005303433	ENSCPBP00000021009	2038 (aa)	XP_005303490	UPI0003889C9F
ENSCPBT00000024741	FANCM-203	6826	-	ENSCPBP00000021013	1941 (aa)	-	-
ENSCPBT00000024738	FANCM-202	6070	-	ENSCPBP00000021010	1985 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000015089's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000015089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000015089	FANCM	100	50.327	ENSG00000187790	FANCM	99	72.100	Homo_sapiens
ENSCPBG00000015089	FANCM	99	51.216	ENSAMEG00000002114	FANCM	98	50.667	Ailuropoda_melanoleuca
ENSCPBG00000015089	FANCM	78	55.581	ENSATEG00000012412	-	70	61.549	Anabas_testudineus
ENSCPBG00000015089	FANCM	100	49.925	ENSANAG00000025075	FANCM	98	50.455	Aotus_nancymaae
ENSCPBG00000015089	FANCM	80	53.940	ENSACLG00000016008	-	92	40.452	Astatotilapia_calliptera
ENSCPBG00000015089	FANCM	75	52.804	ENSAMXG00000020275	-	75	53.324	Astyanax_mexicanus
ENSCPBG00000015089	FANCM	100	49.925	ENSBTAG00000002612	FANCM	94	68.750	Bos_taurus
ENSCPBG00000015089	FANCM	100	50.101	ENSCJAG00000015945	FANCM	98	50.503	Callithrix_jacchus
ENSCPBG00000015089	FANCM	100	50.401	ENSCAFG00000014062	FANCM	98	50.670	Canis_familiaris
ENSCPBG00000015089	FANCM	100	50.250	ENSCHIG00000015176	FANCM	98	50.954	Capra_hircus
ENSCPBG00000015089	FANCM	99	48.324	ENSCPOG00000001446	FANCM	98	48.446	Cavia_porcellus
ENSCPBG00000015089	FANCM	99	49.663	ENSCCAG00000026593	FANCM	98	49.590	Cebus_capucinus
ENSCPBG00000015089	FANCM	100	49.447	ENSCATG00000031379	FANCM	98	50.886	Cercocebus_atys
ENSCPBG00000015089	FANCM	100	49.774	ENSCSAG00000015308	FANCM	98	50.862	Chlorocebus_sabaeus
ENSCPBG00000015089	FANCM	74	63.636	ENSCHOG00000000190	FANCM	74	63.636	Choloepus_hoffmanni
ENSCPBG00000015089	FANCM	99	51.103	ENSCANG00000029498	FANCM	98	51.174	Colobus_angolensis_palliatus
ENSCPBG00000015089	FANCM	99	47.048	ENSCGRG00001023573	Fancm	97	46.974	Cricetulus_griseus_chok1gshd
ENSCPBG00000015089	FANCM	89	58.950	ENSCSEG00000002313	-	86	58.950	Cynoglossus_semilaevis
ENSCPBG00000015089	FANCM	58	55.013	ENSCVAG00000015579	-	65	55.834	Cyprinodon_variegatus
ENSCPBG00000015089	FANCM	100	49.623	ENSDNOG00000007697	FANCM	98	50.215	Dasypus_novemcinctus
ENSCPBG00000015089	FANCM	100	46.917	ENSDORG00000010095	Fancm	97	47.583	Dipodomys_ordii
ENSCPBG00000015089	FANCM	76	69.388	ENSETEG00000003360	FANCM	75	69.388	Echinops_telfairi
ENSCPBG00000015089	FANCM	95	52.516	ENSEASG00005007781	FANCM	99	72.892	Equus_asinus_asinus
ENSCPBG00000015089	FANCM	99	52.516	ENSECAG00000018694	FANCM	84	52.516	Equus_caballus
ENSCPBG00000015089	FANCM	86	60.194	ENSEEUG00000005607	-	83	60.194	Erinaceus_europaeus
ENSCPBG00000015089	FANCM	61	54.054	ENSELUG00000015761	-	70	54.054	Esox_lucius
ENSCPBG00000015089	FANCM	97	48.165	ENSFALG00000001703	FANCM	98	48.139	Ficedula_albicollis
ENSCPBG00000015089	FANCM	95	66.190	ENSFDAG00000009043	FANCM	95	66.190	Fukomys_damarensis
ENSCPBG00000015089	FANCM	57	55.706	ENSGMOG00000002019	-	62	58.672	Gadus_morhua
ENSCPBG00000015089	FANCM	96	56.489	ENSGALG00000031182	FANCM	95	56.148	Gallus_gallus
ENSCPBG00000015089	FANCM	78	49.365	ENSGACG00000009448	-	88	42.708	Gasterosteus_aculeatus
ENSCPBG00000015089	FANCM	100	50.251	ENSGGOG00000008546	FANCM	98	51.366	Gorilla_gorilla
ENSCPBG00000015089	FANCM	70	53.940	ENSHBUG00000007085	-	76	47.345	Haplochromis_burtoni
ENSCPBG00000015089	FANCM	99	49.187	ENSHGLG00000013787	FANCM	98	49.213	Heterocephalus_glaber_female
ENSCPBG00000015089	FANCM	99	49.234	ENSHGLG00100006377	FANCM	98	49.143	Heterocephalus_glaber_male
ENSCPBG00000015089	FANCM	78	54.662	ENSIPUG00000014629	fancm	85	59.647	Ictalurus_punctatus
ENSCPBG00000015089	FANCM	72	54.608	ENSLBEG00000004982	-	91	41.364	Labrus_bergylta
ENSCPBG00000015089	FANCM	99	46.165	ENSLACG00000007739	FANCM	98	46.212	Latimeria_chalumnae
ENSCPBG00000015089	FANCM	99	42.005	ENSLOCG00000011318	FANCM	98	41.958	Lepisosteus_oculatus
ENSCPBG00000015089	FANCM	100	50.756	ENSLAFG00000001136	FANCM	98	51.464	Loxodonta_africana
ENSCPBG00000015089	FANCM	100	49.799	ENSMFAG00000000383	FANCM	98	51.030	Macaca_fascicularis
ENSCPBG00000015089	FANCM	100	49.748	ENSMMUG00000016513	FANCM	98	50.982	Macaca_mulatta
ENSCPBG00000015089	FANCM	100	49.925	ENSMNEG00000038659	FANCM	98	51.151	Macaca_nemestrina
ENSCPBG00000015089	FANCM	96	63.659	ENSMLEG00000035743	FANCM	98	63.317	Mandrillus_leucophaeus
ENSCPBG00000015089	FANCM	99	38.977	ENSMAMG00000007087	-	91	40.557	Mastacembelus_armatus
ENSCPBG00000015089	FANCM	80	53.940	ENSMZEG00005004644	-	92	40.452	Maylandia_zebra
ENSCPBG00000015089	FANCM	99	45.707	ENSMAUG00000015450	Fancm	97	45.490	Mesocricetus_auratus
ENSCPBG00000015089	FANCM	100	49.900	ENSMICG00000005811	FANCM	99	50.190	Microcebus_murinus
ENSCPBG00000015089	FANCM	65	49.962	ENSMOCG00000008775	Fancm	61	49.923	Microtus_ochrogaster
ENSCPBG00000015089	FANCM	56	56.675	ENSMMOG00000010215	-	65	56.601	Mola_mola
ENSCPBG00000015089	FANCM	100	48.233	ENSMODG00000007334	FANCM	97	49.169	Monodelphis_domestica
ENSCPBG00000015089	FANCM	100	45.573	MGP_CAROLIEiJ_G0017791	Fancm	97	46.279	Mus_caroli
ENSCPBG00000015089	FANCM	100	45.582	ENSMUSG00000055884	Fancm	97	68.601	Mus_musculus
ENSCPBG00000015089	FANCM	100	44.855	MGP_PahariEiJ_G0029547	Fancm	97	45.919	Mus_pahari
ENSCPBG00000015089	FANCM	100	45.441	MGP_SPRETEiJ_G0018636	Fancm	97	46.106	Mus_spretus
ENSCPBG00000015089	FANCM	99	51.861	ENSMPUG00000004849	FANCM	98	51.144	Mustela_putorius_furo
ENSCPBG00000015089	FANCM	100	49.101	ENSMLUG00000006671	FANCM	98	49.786	Myotis_lucifugus
ENSCPBG00000015089	FANCM	100	48.328	ENSNGAG00000017199	Fancm	98	48.694	Nannospalax_galili
ENSCPBG00000015089	FANCM	100	50.226	ENSNLEG00000004432	FANCM	98	51.173	Nomascus_leucogenys
ENSCPBG00000015089	FANCM	70	60.976	ENSMEUG00000004977	-	68	59.934	Notamacropus_eugenii
ENSCPBG00000015089	FANCM	68	58.897	ENSONIG00000003531	-	78	49.712	Oreochromis_niloticus
ENSCPBG00000015089	FANCM	95	50.575	ENSOANG00000013997	FANCM	98	50.625	Ornithorhynchus_anatinus
ENSCPBG00000015089	FANCM	99	50.048	ENSOCUG00000007539	FANCM	98	50.598	Oryctolagus_cuniculus
ENSCPBG00000015089	FANCM	92	39.403	ENSORLG00000014503	-	86	43.548	Oryzias_latipes
ENSCPBG00000015089	FANCM	67	53.539	ENSORLG00020013516	-	65	59.005	Oryzias_latipes_hni
ENSCPBG00000015089	FANCM	67	53.486	ENSORLG00015012100	-	65	54.032	Oryzias_latipes_hsok
ENSCPBG00000015089	FANCM	84	54.900	ENSOMEG00000010717	-	85	59.890	Oryzias_melastigma
ENSCPBG00000015089	FANCM	100	48.474	ENSOGAG00000003015	FANCM	98	49.810	Otolemur_garnettii
ENSCPBG00000015089	FANCM	100	50.101	ENSOARG00000009429	FANCM	98	50.768	Ovis_aries
ENSCPBG00000015089	FANCM	100	50.252	ENSPPAG00000028944	FANCM	98	51.368	Pan_paniscus
ENSCPBG00000015089	FANCM	99	51.249	ENSPTRG00000006307	FANCM	98	51.368	Pan_troglodytes
ENSCPBG00000015089	FANCM	100	49.874	ENSPANG00000023200	FANCM	98	51.102	Papio_anubis
ENSCPBG00000015089	FANCM	99	46.132	ENSPEMG00000005619	Fancm	97	45.716	Peromyscus_maniculatus_bairdii
ENSCPBG00000015089	FANCM	64	58.564	ENSPFOG00000002008	-	65	58.564	Poecilia_formosa
ENSCPBG00000015089	FANCM	50	53.267	ENSPLAG00000014164	-	68	58.149	Poecilia_latipinna
ENSCPBG00000015089	FANCM	69	53.615	ENSPMEG00000010746	-	68	58.486	Poecilia_mexicana
ENSCPBG00000015089	FANCM	50	52.889	ENSPREG00000019849	-	68	57.439	Poecilia_reticulata
ENSCPBG00000015089	FANCM	93	53.743	ENSPPYG00000005781	FANCM	96	53.927	Pongo_abelii
ENSCPBG00000015089	FANCM	66	62.281	ENSPCAG00000011363	-	66	62.281	Procavia_capensis
ENSCPBG00000015089	FANCM	93	61.765	ENSPCOG00000014388	FANCM	96	62.428	Propithecus_coquereli
ENSCPBG00000015089	FANCM	69	66.180	ENSPVAG00000015802	FANCM	67	66.180	Pteropus_vampyrus
ENSCPBG00000015089	FANCM	99	37.142	ENSPNAG00000013558	-	89	39.954	Pygocentrus_nattereri
ENSCPBG00000015089	FANCM	100	45.658	ENSRNOG00000056721	Fancm	98	56.322	Rattus_norvegicus
ENSCPBG00000015089	FANCM	100	49.523	ENSRBIG00000011451	FANCM	98	50.742	Rhinopithecus_bieti
ENSCPBG00000015089	FANCM	100	49.849	ENSRROG00000028917	FANCM	98	51.054	Rhinopithecus_roxellana
ENSCPBG00000015089	FANCM	100	50.100	ENSSBOG00000030882	FANCM	98	50.453	Saimiri_boliviensis_boliviensis
ENSCPBG00000015089	FANCM	96	58.135	ENSSHAG00000000507	FANCM	99	58.357	Sarcophilus_harrisii
ENSCPBG00000015089	FANCM	97	45.146	ENSSMAG00000019903	-	65	69.030	Scophthalmus_maximus
ENSCPBG00000015089	FANCM	65	41.842	ENSSDUG00000016682	-	97	60.837	Seriola_dumerili
ENSCPBG00000015089	FANCM	96	44.592	ENSSLDG00000003408	-	92	40.217	Seriola_lalandi_dorsalis
ENSCPBG00000015089	FANCM	78	70.530	ENSSARG00000002618	FANCM	76	69.983	Sorex_araneus
ENSCPBG00000015089	FANCM	99	50.428	ENSSSCG00000005000	FANCM	98	49.571	Sus_scrofa
ENSCPBG00000015089	FANCM	82	55.806	ENSTNIG00000017277	-	69	58.594	Tetraodon_nigroviridis
ENSCPBG00000015089	FANCM	100	50.427	ENSTTRG00000006669	FANCM	98	50.840	Tursiops_truncatus
ENSCPBG00000015089	FANCM	67	71.965	ENSVPAG00000005763	FANCM	67	71.965	Vicugna_pacos
ENSCPBG00000015089	FANCM	100	50.525	ENSVVUG00000000357	FANCM	98	50.668	Vulpes_vulpes
ENSCPBG00000015089	FANCM	78	48.138	ENSXMAG00000007702	-	85	45.024	Xiphophorus_maculatus