EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000015272 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4772 bases
Position: chrKK083377.1:48734-53505
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000021257	zf-C2H2	PF00096.26	2.2e-22	1	3
ENSCPBP00000021257	zf-C2H2	PF00096.26	2.2e-22	2	3
ENSCPBP00000021257	zf-C2H2	PF00096.26	2.2e-22	3	3
ENSCPBP00000021257	zf-met	PF12874.7	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000025009	-	579	-	ENSCPBP00000021257	192 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000015272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000015272's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000015272	-	62	42.478	ENSCPBG00000004530	-	56	42.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000015272	-	77	50.000	ENSAPOG00000016615	-	86	50.000	Acanthochromis_polyacanthus
ENSCPBG00000015272	-	67	42.735	ENSELUG00000000281	-	53	46.269	Esox_lucius
ENSCPBG00000015272	-	59	44.828	ENSLBEG00000025139	-	84	44.828	Labrus_bergylta
ENSCPBG00000015272	-	68	54.839	ENSORLG00000028391	-	92	54.839	Oryzias_latipes
ENSCPBG00000015272	-	85	54.118	ENSORLG00000028433	-	54	50.769	Oryzias_latipes
ENSCPBG00000015272	-	72	47.959	ENSORLG00000024183	-	64	47.959	Oryzias_latipes
ENSCPBG00000015272	-	89	48.780	ENSORLG00020007967	-	91	44.828	Oryzias_latipes_hni
ENSCPBG00000015272	-	51	49.462	ENSORLG00015016392	-	98	49.462	Oryzias_latipes_hsok
ENSCPBG00000015272	-	73	46.835	ENSOMEG00000007699	-	90	55.000	Oryzias_melastigma
ENSCPBG00000015272	-	50	54.717	ENSOMEG00000000236	-	87	54.717	Oryzias_melastigma
ENSCPBG00000015272	-	85	42.683	ENSOMEG00000013449	-	85	46.429	Oryzias_melastigma
ENSCPBG00000015272	-	57	55.357	ENSPLAG00000002505	-	81	55.357	Poecilia_latipinna
ENSCPBG00000015272	-	59	50.000	ENSPMEG00000022886	-	85	50.000	Poecilia_mexicana
ENSCPBG00000015272	-	53	40.000	ENSSLDG00000000202	-	85	40.000	Seriola_lalandi_dorsalis
ENSCPBG00000015272	-	51	43.103	ENSXCOG00000009674	-	94	43.103	Xiphophorus_couchianus