EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000015691 (Gene tree)
Gene ID: 101950590
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 85468 bases
Position: chr8:31279437-31364904
Accession: 16785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000021859	PIN_4	PF13638.6	7.7e-30	1	1
ENSCPBP00000021861	PIN_4	PF13638.6	8e-30	1	1
ENSCPBP00000021860	PIN_4	PF13638.6	8.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000025748	SWT1-203	2769	-	ENSCPBP00000021861	922 (aa)	-	-
ENSCPBT00000025747	SWT1-202	2987	-	ENSCPBP00000021860	966 (aa)	-	-
ENSCPBT00000025746	SWT1-201	3370	-	ENSCPBP00000021859	901 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000015691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000015691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000015691	SWT1	95	47.194	ENSG00000116668	SWT1	96	46.077	Homo_sapiens
ENSCPBG00000015691	SWT1	60	36.301	ENSAPOG00000014897	-	58	36.301	Acanthochromis_polyacanthus
ENSCPBG00000015691	SWT1	95	47.592	ENSAMEG00000013585	SWT1	94	47.241	Ailuropoda_melanoleuca
ENSCPBG00000015691	SWT1	62	36.213	ENSAOCG00000013932	swt1	60	36.379	Amphiprion_ocellaris
ENSCPBG00000015691	SWT1	62	36.047	ENSAPEG00000009613	-	60	36.213	Amphiprion_percula
ENSCPBG00000015691	SWT1	60	37.973	ENSATEG00000018946	swt1	57	37.973	Anabas_testudineus
ENSCPBG00000015691	SWT1	82	64.343	ENSAPLG00000008607	SWT1	99	64.123	Anas_platyrhynchos
ENSCPBG00000015691	SWT1	92	46.445	ENSACAG00000002276	SWT1	96	46.445	Anolis_carolinensis
ENSCPBG00000015691	SWT1	95	47.991	ENSANAG00000027068	SWT1	93	47.876	Aotus_nancymaae
ENSCPBG00000015691	SWT1	60	36.034	ENSACLG00000009742	swt1	68	35.813	Astatotilapia_calliptera
ENSCPBG00000015691	SWT1	69	39.490	ENSAMXG00000010971	swt1	69	38.227	Astyanax_mexicanus
ENSCPBG00000015691	SWT1	68	43.381	ENSBTAG00000004492	SWT1	51	61.321	Bos_taurus
ENSCPBG00000015691	SWT1	94	47.387	ENSCJAG00000005544	SWT1	97	46.393	Callithrix_jacchus
ENSCPBG00000015691	SWT1	95	48.558	ENSCAFG00000013543	SWT1	93	46.927	Canis_familiaris
ENSCPBG00000015691	SWT1	94	48.727	ENSCAFG00020015648	SWT1	98	47.712	Canis_lupus_dingo
ENSCPBG00000015691	SWT1	90	47.810	ENSCHIG00000023511	SWT1	98	57.191	Capra_hircus
ENSCPBG00000015691	SWT1	95	47.423	ENSTSYG00000010470	SWT1	93	47.254	Carlito_syrichta
ENSCPBG00000015691	SWT1	91	45.238	ENSCPOG00000014251	SWT1	66	56.215	Cavia_porcellus
ENSCPBG00000015691	SWT1	95	47.532	ENSCCAG00000033926	SWT1	93	47.417	Cebus_capucinus
ENSCPBG00000015691	SWT1	95	47.374	ENSCATG00000042210	SWT1	98	57.288	Cercocebus_atys
ENSCPBG00000015691	SWT1	99	44.505	ENSCLAG00000013959	SWT1	66	56.926	Chinchilla_lanigera
ENSCPBG00000015691	SWT1	95	47.489	ENSCSAG00000012895	SWT1	96	46.586	Chlorocebus_sabaeus
ENSCPBG00000015691	SWT1	95	47.362	ENSCANG00000032207	SWT1	98	57.240	Colobus_angolensis_palliatus
ENSCPBG00000015691	SWT1	78	51.321	ENSCGRG00001022955	Swt1	76	53.028	Cricetulus_griseus_chok1gshd
ENSCPBG00000015691	SWT1	78	51.321	ENSCGRG00000010224	Swt1	79	51.032	Cricetulus_griseus_crigri
ENSCPBG00000015691	SWT1	63	37.829	ENSCSEG00000017352	swt1	76	38.158	Cynoglossus_semilaevis
ENSCPBG00000015691	SWT1	63	40.886	ENSDARG00000094010	swt1	58	40.886	Danio_rerio
ENSCPBG00000015691	SWT1	91	44.159	ENSDNOG00000005254	SWT1	98	44.787	Dasypus_novemcinctus
ENSCPBG00000015691	SWT1	81	50.135	ENSDORG00000010531	Swt1	83	50.833	Dipodomys_ordii
ENSCPBG00000015691	SWT1	92	45.593	ENSEASG00005005530	SWT1	95	44.055	Equus_asinus_asinus
ENSCPBG00000015691	SWT1	92	47.406	ENSECAG00000012085	SWT1	97	46.172	Equus_caballus
ENSCPBG00000015691	SWT1	77	67.647	ENSEEUG00000003664	SWT1	79	67.647	Erinaceus_europaeus
ENSCPBG00000015691	SWT1	62	41.077	ENSELUG00000020565	swt1	57	41.077	Esox_lucius
ENSCPBG00000015691	SWT1	98	45.662	ENSFCAG00000011286	SWT1	94	46.735	Felis_catus
ENSCPBG00000015691	SWT1	93	55.466	ENSFALG00000003206	SWT1	96	55.466	Ficedula_albicollis
ENSCPBG00000015691	SWT1	99	43.682	ENSFDAG00000007569	SWT1	65	55.857	Fukomys_damarensis
ENSCPBG00000015691	SWT1	94	61.176	ENSGALG00000034230	SWT1	97	60.471	Gallus_gallus
ENSCPBG00000015691	SWT1	63	35.410	ENSGAFG00000007803	-	60	35.410	Gambusia_affinis
ENSCPBG00000015691	SWT1	91	88.429	ENSGAGG00000025050	SWT1	100	90.172	Gopherus_agassizii
ENSCPBG00000015691	SWT1	57	58.046	ENSGGOG00000041167	-	93	58.046	Gorilla_gorilla
ENSCPBG00000015691	SWT1	62	36.000	ENSHBUG00000006188	swt1	68	35.786	Haplochromis_burtoni
ENSCPBG00000015691	SWT1	98	45.044	ENSHGLG00000006542	SWT1	80	51.058	Heterocephalus_glaber_female
ENSCPBG00000015691	SWT1	100	44.887	ENSHGLG00100014408	SWT1	99	44.737	Heterocephalus_glaber_male
ENSCPBG00000015691	SWT1	62	38.370	ENSIPUG00000009113	-	58	38.370	Ictalurus_punctatus
ENSCPBG00000015691	SWT1	95	46.682	ENSSTOG00000010356	SWT1	74	53.275	Ictidomys_tridecemlineatus
ENSCPBG00000015691	SWT1	81	48.128	ENSJJAG00000015927	Swt1	65	55.888	Jaculus_jaculus
ENSCPBG00000015691	SWT1	61	38.191	ENSKMAG00000012533	swt1	57	38.605	Kryptolebias_marmoratus
ENSCPBG00000015691	SWT1	62	37.018	ENSLBEG00000020663	-	59	36.851	Labrus_bergylta
ENSCPBG00000015691	SWT1	71	50.712	ENSLACG00000009194	SWT1	98	50.570	Latimeria_chalumnae
ENSCPBG00000015691	SWT1	62	45.899	ENSLOCG00000001749	swt1	100	43.761	Lepisosteus_oculatus
ENSCPBG00000015691	SWT1	64	58.404	ENSLAFG00000004346	-	98	58.404	Loxodonta_africana
ENSCPBG00000015691	SWT1	95	47.032	ENSMFAG00000031793	SWT1	98	57.436	Macaca_fascicularis
ENSCPBG00000015691	SWT1	95	45.946	ENSMMUG00000013882	SWT1	98	56.239	Macaca_mulatta
ENSCPBG00000015691	SWT1	95	47.260	ENSMNEG00000035502	SWT1	98	57.436	Macaca_nemestrina
ENSCPBG00000015691	SWT1	95	47.489	ENSMLEG00000038692	SWT1	98	57.458	Mandrillus_leucophaeus
ENSCPBG00000015691	SWT1	62	36.000	ENSMZEG00005018489	swt1	68	35.786	Maylandia_zebra
ENSCPBG00000015691	SWT1	63	67.814	ENSMGAG00000000973	SWT1	97	67.642	Meleagris_gallopavo
ENSCPBG00000015691	SWT1	67	50.244	ENSMAUG00000007996	Swt1	63	50.252	Mesocricetus_auratus
ENSCPBG00000015691	SWT1	95	47.592	ENSMICG00000014975	SWT1	93	47.477	Microcebus_murinus
ENSCPBG00000015691	SWT1	81	50.402	ENSMOCG00000009776	Swt1	74	52.299	Microtus_ochrogaster
ENSCPBG00000015691	SWT1	99	45.690	ENSMODG00000007472	SWT1	93	45.819	Monodelphis_domestica
ENSCPBG00000015691	SWT1	60	37.847	ENSMALG00000019308	swt1	57	37.847	Monopterus_albus
ENSCPBG00000015691	SWT1	76	53.247	MGP_CAROLIEiJ_G0014692	Swt1	71	62.147	Mus_caroli
ENSCPBG00000015691	SWT1	76	52.525	ENSMUSG00000052748	Swt1	71	61.017	Mus_musculus
ENSCPBG00000015691	SWT1	78	51.608	MGP_PahariEiJ_G0027928	Swt1	71	62.147	Mus_pahari
ENSCPBG00000015691	SWT1	76	52.814	MGP_SPRETEiJ_G0015499	Swt1	71	62.147	Mus_spretus
ENSCPBG00000015691	SWT1	95	47.597	ENSMPUG00000011913	SWT1	94	47.133	Mustela_putorius_furo
ENSCPBG00000015691	SWT1	95	48.229	ENSMLUG00000001142	SWT1	92	48.174	Myotis_lucifugus
ENSCPBG00000015691	SWT1	99	43.974	ENSNGAG00000021080	Swt1	73	48.321	Nannospalax_galili
ENSCPBG00000015691	SWT1	95	47.652	ENSNLEG00000018031	SWT1	96	46.740	Nomascus_leucogenys
ENSCPBG00000015691	SWT1	51	56.395	ENSMEUG00000000236	-	54	56.395	Notamacropus_eugenii
ENSCPBG00000015691	SWT1	52	54.386	ENSOPRG00000000692	SWT1	55	53.333	Ochotona_princeps
ENSCPBG00000015691	SWT1	62	35.852	ENSONIG00000009994	swt1	97	37.361	Oreochromis_niloticus
ENSCPBG00000015691	SWT1	75	52.326	ENSOANG00000001013	-	88	50.207	Ornithorhynchus_anatinus
ENSCPBG00000015691	SWT1	67	53.909	ENSOCUG00000004901	SWT1	67	53.746	Oryctolagus_cuniculus
ENSCPBG00000015691	SWT1	60	36.473	ENSORLG00000009682	swt1	58	36.644	Oryzias_latipes
ENSCPBG00000015691	SWT1	60	36.815	ENSORLG00020011654	swt1	59	36.986	Oryzias_latipes_hni
ENSCPBG00000015691	SWT1	60	36.473	ENSORLG00015007734	swt1	59	36.644	Oryzias_latipes_hsok
ENSCPBG00000015691	SWT1	60	36.317	ENSOMEG00000006607	swt1	57	36.833	Oryzias_melastigma
ENSCPBG00000015691	SWT1	99	47.046	ENSOGAG00000016195	SWT1	94	47.248	Otolemur_garnettii
ENSCPBG00000015691	SWT1	98	45.879	ENSOARG00000004156	SWT1	63	58.503	Ovis_aries
ENSCPBG00000015691	SWT1	95	47.423	ENSPPAG00000021400	SWT1	96	46.298	Pan_paniscus
ENSCPBG00000015691	SWT1	95	47.072	ENSPPRG00000023754	SWT1	94	46.613	Panthera_pardus
ENSCPBG00000015691	SWT1	95	47.072	ENSPTIG00000021889	SWT1	94	46.613	Panthera_tigris_altaica
ENSCPBG00000015691	SWT1	95	47.537	ENSPTRG00000001777	SWT1	96	46.409	Pan_troglodytes
ENSCPBG00000015691	SWT1	95	46.918	ENSPANG00000005099	SWT1	98	57.288	Papio_anubis
ENSCPBG00000015691	SWT1	62	37.913	ENSPKIG00000005979	swt1	59	37.913	Paramormyrops_kingsleyae
ENSCPBG00000015691	SWT1	98	82.623	ENSPSIG00000008961	SWT1	99	82.599	Pelodiscus_sinensis
ENSCPBG00000015691	SWT1	76	52.511	ENSPEMG00000008208	Swt1	74	52.511	Peromyscus_maniculatus_bairdii
ENSCPBG00000015691	SWT1	93	76.471	ENSPCIG00000002443	SWT1	89	76.471	Phascolarctos_cinereus
ENSCPBG00000015691	SWT1	60	34.753	ENSPFOG00000010988	-	69	34.483	Poecilia_formosa
ENSCPBG00000015691	SWT1	60	34.923	ENSPLAG00000022908	-	58	34.753	Poecilia_latipinna
ENSCPBG00000015691	SWT1	60	34.753	ENSPMEG00000006943	-	58	34.583	Poecilia_mexicana
ENSCPBG00000015691	SWT1	95	47.086	ENSPPYG00000000415	SWT1	96	46.086	Pongo_abelii
ENSCPBG00000015691	SWT1	65	55.285	ENSPCAG00000008337	SWT1	64	55.285	Procavia_capensis
ENSCPBG00000015691	SWT1	79	48.623	ENSPVAG00000005968	SWT1	78	49.235	Pteropus_vampyrus
ENSCPBG00000015691	SWT1	62	36.000	ENSPNYG00000012934	swt1	68	35.786	Pundamilia_nyererei
ENSCPBG00000015691	SWT1	62	40.174	ENSPNAG00000017795	swt1	58	40.174	Pygocentrus_nattereri
ENSCPBG00000015691	SWT1	76	52.080	ENSRNOG00000032258	Swt1	74	52.080	Rattus_norvegicus
ENSCPBG00000015691	SWT1	89	47.368	ENSRBIG00000040630	SWT1	98	55.631	Rhinopithecus_bieti
ENSCPBG00000015691	SWT1	68	44.444	ENSRROG00000028596	SWT1	100	43.399	Rhinopithecus_roxellana
ENSCPBG00000015691	SWT1	94	47.387	ENSSBOG00000028825	SWT1	92	47.271	Saimiri_boliviensis_boliviensis
ENSCPBG00000015691	SWT1	99	47.249	ENSSHAG00000009241	SWT1	93	47.821	Sarcophilus_harrisii
ENSCPBG00000015691	SWT1	62	41.248	ENSSFOG00015004895	swt1	57	41.248	Scleropages_formosus
ENSCPBG00000015691	SWT1	60	38.079	ENSSDUG00000012345	swt1	58	38.079	Seriola_dumerili
ENSCPBG00000015691	SWT1	60	38.079	ENSSLDG00000003821	swt1	58	38.079	Seriola_lalandi_dorsalis
ENSCPBG00000015691	SWT1	98	61.676	ENSSPUG00000003899	SWT1	99	61.197	Sphenodon_punctatus
ENSCPBG00000015691	SWT1	60	35.836	ENSSPAG00000001030	swt1	58	35.836	Stegastes_partitus
ENSCPBG00000015691	SWT1	95	47.411	ENSSSCG00000015569	SWT1	98	46.851	Sus_scrofa
ENSCPBG00000015691	SWT1	62	66.548	ENSTGUG00000003718	-	100	66.548	Taeniopygia_guttata
ENSCPBG00000015691	SWT1	66	35.342	ENSTRUG00000006420	swt1	64	35.342	Takifugu_rubripes
ENSCPBG00000015691	SWT1	90	46.981	ENSTTRG00000005914	SWT1	77	50.485	Tursiops_truncatus
ENSCPBG00000015691	SWT1	79	52.500	ENSUAMG00000020937	SWT1	84	52.500	Ursus_americanus
ENSCPBG00000015691	SWT1	95	47.766	ENSUMAG00000021918	SWT1	94	47.646	Ursus_maritimus
ENSCPBG00000015691	SWT1	87	56.738	ENSVPAG00000011855	SWT1	85	56.738	Vicugna_pacos
ENSCPBG00000015691	SWT1	98	47.315	ENSVVUG00000009182	SWT1	99	46.468	Vulpes_vulpes
ENSCPBG00000015691	SWT1	60	35.616	ENSXMAG00000023472	-	58	35.616	Xiphophorus_maculatus