EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000015742 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 3848 bases
Position: chrKK082936.1:3305797-3309644
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000021966	zf-C2H2	PF00096.26	2e-24	1	4
ENSCPBP00000021966	zf-C2H2	PF00096.26	2e-24	2	4
ENSCPBP00000021966	zf-C2H2	PF00096.26	2e-24	3	4
ENSCPBP00000021966	zf-C2H2	PF00096.26	2e-24	4	4
ENSCPBP00000021966	zf-met	PF12874.7	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000025866	-	408	-	ENSCPBP00000021966	135 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000015742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000015742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000015742	-	100	45.679	ENSCPBG00000003495	ZNF236	50	45.679
ENSCPBG00000015742	-	100	41.406	ENSCPBG00000004296	ZBTB47	76	41.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000015742	-	100	99.259	ENSAMEG00000013858	-	70	99.259	Ailuropoda_melanoleuca
ENSCPBG00000015742	-	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSCPBG00000015742	-	100	99.259	ENSAPLG00000015700	GFI1	50	99.259	Anas_platyrhynchos
ENSCPBG00000015742	-	83	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSCPBG00000015742	-	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSCPBG00000015742	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSCPBG00000015742	-	99	77.612	ENSCING00000011342	-	71	77.612	Ciona_intestinalis
ENSCPBG00000015742	-	100	78.519	ENSCSAVG00000005904	-	83	78.519	Ciona_savignyi
ENSCPBG00000015742	-	100	99.259	ENSCGRG00000013485	-	100	99.259	Cricetulus_griseus_crigri
ENSCPBG00000015742	-	100	99.259	ENSDORG00000023443	-	100	99.259	Dipodomys_ordii
ENSCPBG00000015742	-	100	99.259	ENSFDAG00000019296	-	100	99.259	Fukomys_damarensis
ENSCPBG00000015742	-	100	100.000	ENSGAGG00000015899	GFI1	100	100.000	Gopherus_agassizii
ENSCPBG00000015742	-	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSCPBG00000015742	-	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSCPBG00000015742	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSCPBG00000015742	-	100	99.259	ENSMMUG00000005068	GFI1	100	99.259	Macaca_mulatta
ENSCPBG00000015742	-	100	99.259	ENSMAUG00000021273	-	100	99.259	Mesocricetus_auratus
ENSCPBG00000015742	-	100	99.259	ENSMOCG00000004478	-	100	99.259	Microtus_ochrogaster
ENSCPBG00000015742	-	100	94.815	ENSMMOG00000005556	gfi1ab	62	94.815	Mola_mola
ENSCPBG00000015742	-	100	99.259	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSCPBG00000015742	-	100	99.259	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSCPBG00000015742	-	100	99.259	ENSNGAG00000002549	-	100	99.259	Nannospalax_galili
ENSCPBG00000015742	-	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSCPBG00000015742	-	82	79.279	ENSNBRG00000001834	-	94	79.279	Neolamprologus_brichardi
ENSCPBG00000015742	-	100	99.259	ENSODEG00000006410	-	100	99.259	Octodon_degus
ENSCPBG00000015742	-	100	97.778	ENSOANG00000022289	-	72	97.778	Ornithorhynchus_anatinus
ENSCPBG00000015742	-	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSCPBG00000015742	-	100	97.037	ENSPMGG00000012546	gfi1ab	73	97.037	Periophthalmus_magnuspinnatus
ENSCPBG00000015742	-	98	93.939	ENSPMGG00000011041	GFI1	59	93.939	Periophthalmus_magnuspinnatus
ENSCPBG00000015742	-	100	97.037	ENSPLAG00000010879	gfi1ab	55	97.037	Poecilia_latipinna
ENSCPBG00000015742	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSCPBG00000015742	-	82	81.982	ENSPNAG00000014299	-	54	81.982	Pygocentrus_nattereri
ENSCPBG00000015742	-	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSCPBG00000015742	-	100	97.037	ENSSPAG00000009140	gfi1ab	58	97.037	Stegastes_partitus
ENSCPBG00000015742	-	100	99.259	ENSTGUG00000006060	GFI1	58	99.259	Taeniopygia_guttata
ENSCPBG00000015742	-	100	99.259	ENSUMAG00000011251	-	100	99.259	Ursus_maritimus
ENSCPBG00000015742	-	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSCPBG00000015742	-	96	64.000	ENSXMAG00000006527	-	50	64.000	Xiphophorus_maculatus