EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000015839 (Gene tree)
Gene ID: 101935727
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 21394 bases
Position: chrKK088209.1:7865970-7887363
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000022122	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000026038	-	1739	-	ENSCPBP00000022122	206 (aa)	XP_005290983	UPI000388DBF5

Gene Model

Click here to download ENSCPBG00000015839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000015839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000015839	-	82	47.337	ENSCPBG00000006855	RAB30	83	47.337
ENSCPBG00000015839	-	88	38.251	ENSCPBG00000011245	RAB42	89	38.251
ENSCPBG00000015839	-	86	38.547	ENSCPBG00000021406	RAB6B	84	38.547
ENSCPBG00000015839	-	80	33.537	ENSCPBG00000009289	-	87	33.537
ENSCPBG00000015839	-	72	36.000	ENSCPBG00000022721	RRAS2	79	36.025
ENSCPBG00000015839	-	89	37.368	ENSCPBG00000027605	RAB33B	84	37.368
ENSCPBG00000015839	-	83	39.306	ENSCPBG00000011236	-	80	39.306
ENSCPBG00000015839	-	94	37.129	ENSCPBG00000000041	RAB6A	95	37.129
ENSCPBG00000015839	-	70	38.621	ENSCPBG00000011715	-	63	38.621
ENSCPBG00000015839	-	83	36.628	ENSCPBG00000022640	RAB23	72	36.628
ENSCPBG00000015839	-	83	48.256	ENSCPBG00000012631	RAB35	95	45.596
ENSCPBG00000015839	-	82	45.294	ENSCPBG00000016907	RAB15	79	45.294
ENSCPBG00000015839	-	83	39.766	ENSCPBG00000014340	RAB41	79	39.766
ENSCPBG00000015839	-	79	38.922	ENSCPBG00000014343	RAB7A	81	38.922
ENSCPBG00000015839	-	77	46.875	ENSCPBG00000025819	-	78	46.875
ENSCPBG00000015839	-	96	41.063	ENSCPBG00000025817	RAB25	96	41.063
ENSCPBG00000015839	-	81	36.310	ENSCPBG00000013681	MRAS	95	33.010
ENSCPBG00000015839	-	79	32.934	ENSCPBG00000022284	DNAJC27	61	32.934
ENSCPBG00000015839	-	70	46.259	ENSCPBG00000012042	RAB33A	58	46.259
ENSCPBG00000015839	-	89	48.404	ENSCPBG00000012691	RAB2B	86	48.404
ENSCPBG00000015839	-	79	49.091	ENSCPBG00000028375	RAB12	67	49.091
ENSCPBG00000015839	-	59	31.148	ENSCPBG00000018802	-	90	32.331
ENSCPBG00000015839	-	78	50.617	ENSCPBG00000022446	RAB1B	80	50.617
ENSCPBG00000015839	-	87	33.149	ENSCPBG00000016544	NRAS	95	33.149
ENSCPBG00000015839	-	95	44.949	ENSCPBG00000013243	RAB1A	95	44.949
ENSCPBG00000015839	-	94	40.000	ENSCPBG00000023927	RAB22A	98	40.000
ENSCPBG00000015839	-	86	34.444	ENSCPBG00000002289	RAB36	58	34.444
ENSCPBG00000015839	-	83	39.884	ENSCPBG00000001057	RAB39B	81	39.884
ENSCPBG00000015839	-	78	48.148	ENSCPBG00000014614	RAB11A	75	48.148
ENSCPBG00000015839	-	93	41.837	ENSCPBG00000022559	RAB5A	90	41.837
ENSCPBG00000015839	-	89	48.936	ENSCPBG00000023254	RAB2A	97	46.635
ENSCPBG00000015839	-	93	39.899	ENSCPBG00000012712	RAB5B	90	39.899
ENSCPBG00000015839	-	80	32.927	ENSCPBG00000015094	-	88	32.927
ENSCPBG00000015839	-	81	32.530	ENSCPBG00000013941	-	87	32.530
ENSCPBG00000015839	-	79	49.390	ENSCPBG00000009941	RAB14	76	49.390
ENSCPBG00000015839	-	79	46.341	ENSCPBG00000011914	RAB19	76	46.341
ENSCPBG00000015839	-	96	70.647	ENSCPBG00000027619	-	98	70.647
ENSCPBG00000015839	-	70	34.899	ENSCPBG00000018286	RHEB	78	34.899
ENSCPBG00000015839	-	78	48.148	ENSCPBG00000017056	-	74	48.148
ENSCPBG00000015839	-	80	39.286	ENSCPBG00000016033	RAB9A	77	39.286
ENSCPBG00000015839	-	56	35.246	ENSCPBG00000018327	ARL14	60	35.246
ENSCPBG00000015839	-	79	39.759	ENSCPBG00000001542	RAB9B	83	39.759
ENSCPBG00000015839	-	78	34.940	ENSCPBG00000028244	RERG	81	34.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000015839	-	100	86.408	ENSAPOG00000010760	rab18a	100	86.408	Acanthochromis_polyacanthus
ENSCPBG00000015839	-	100	74.757	ENSACIG00000009617	rab18a	100	74.757	Amphilophus_citrinellus
ENSCPBG00000015839	-	100	85.922	ENSAOCG00000016233	rab18a	100	85.922	Amphiprion_ocellaris
ENSCPBG00000015839	-	100	85.922	ENSAPEG00000005392	rab18a	100	85.922	Amphiprion_percula
ENSCPBG00000015839	-	100	86.893	ENSATEG00000021911	rab18a	100	86.893	Anabas_testudineus
ENSCPBG00000015839	-	100	95.631	ENSACAG00000005463	-	100	95.631	Anolis_carolinensis
ENSCPBG00000015839	-	100	84.466	ENSACLG00000011484	rab18a	100	84.466	Astatotilapia_calliptera
ENSCPBG00000015839	-	97	77.000	ENSCING00000006838	-	100	77.000	Ciona_intestinalis
ENSCPBG00000015839	-	97	74.500	ENSCSAVG00000010348	-	100	74.500	Ciona_savignyi
ENSCPBG00000015839	-	100	87.864	ENSCSEG00000011816	rab18a	100	87.864	Cynoglossus_semilaevis
ENSCPBG00000015839	-	93	88.482	ENSCVAG00000015451	rab18a	100	86.408	Cyprinodon_variegatus
ENSCPBG00000015839	-	100	82.039	ENSDARG00000055291	rab18a	100	82.039	Danio_rerio
ENSCPBG00000015839	-	100	89.806	ENSELUG00000003805	rab18a	100	89.806	Esox_lucius
ENSCPBG00000015839	-	93	87.958	ENSFHEG00000019455	rab18a	100	85.922	Fundulus_heteroclitus
ENSCPBG00000015839	-	93	87.958	ENSGAFG00000002790	rab18a	100	86.893	Gambusia_affinis
ENSCPBG00000015839	-	100	99.029	ENSGAGG00000015642	-	100	99.029	Gopherus_agassizii
ENSCPBG00000015839	-	100	84.466	ENSHBUG00000001518	rab18a	100	84.466	Haplochromis_burtoni
ENSCPBG00000015839	-	99	85.854	ENSLBEG00000005861	rab18a	95	85.854	Labrus_bergylta
ENSCPBG00000015839	-	100	96.602	ENSLACG00000009310	rab18a	100	96.602	Latimeria_chalumnae
ENSCPBG00000015839	-	100	92.233	ENSLOCG00000007491	rab18a	100	92.233	Lepisosteus_oculatus
ENSCPBG00000015839	-	100	86.893	ENSMAMG00000014320	rab18a	100	86.893	Mastacembelus_armatus
ENSCPBG00000015839	-	100	83.981	ENSMZEG00005017235	rab18a	100	83.981	Maylandia_zebra
ENSCPBG00000015839	-	100	87.379	ENSMALG00000009813	rab18a	100	87.379	Monopterus_albus
ENSCPBG00000015839	-	100	84.466	ENSNBRG00000013507	rab18a	100	84.466	Neolamprologus_brichardi
ENSCPBG00000015839	-	93	86.387	ENSORLG00000004624	rab18a	100	83.981	Oryzias_latipes
ENSCPBG00000015839	-	93	86.911	ENSORLG00020008333	rab18a	100	84.466	Oryzias_latipes_hni
ENSCPBG00000015839	-	93	86.387	ENSORLG00015004739	rab18a	100	83.981	Oryzias_latipes_hsok
ENSCPBG00000015839	-	93	86.387	ENSOMEG00000020605	rab18a	100	84.466	Oryzias_melastigma
ENSCPBG00000015839	-	100	89.320	ENSPKIG00000009825	rab18a	100	89.320	Paramormyrops_kingsleyae
ENSCPBG00000015839	-	100	84.951	ENSPMGG00000020409	-	100	84.951	Periophthalmus_magnuspinnatus
ENSCPBG00000015839	-	93	87.958	ENSPFOG00000007571	rab18a	100	86.893	Poecilia_formosa
ENSCPBG00000015839	-	93	87.958	ENSPLAG00000010104	rab18a	100	86.893	Poecilia_latipinna
ENSCPBG00000015839	-	93	87.958	ENSPMEG00000013085	rab18a	100	86.893	Poecilia_mexicana
ENSCPBG00000015839	-	93	87.958	ENSPREG00000005923	rab18a	83	86.893	Poecilia_reticulata
ENSCPBG00000015839	-	100	84.466	ENSPNYG00000007064	rab18a	100	84.466	Pundamilia_nyererei
ENSCPBG00000015839	-	99	82.759	ENSPNAG00000011548	rab18a	100	82.759	Pygocentrus_nattereri
ENSCPBG00000015839	-	100	90.291	ENSSFOG00015017444	rab18a	84	90.777	Scleropages_formosus
ENSCPBG00000015839	-	93	89.062	ENSSMAG00000002969	rab18a	100	86.473	Scophthalmus_maximus
ENSCPBG00000015839	-	93	89.529	ENSSDUG00000003823	rab18a	100	86.893	Seriola_dumerili
ENSCPBG00000015839	-	93	89.529	ENSSLDG00000006977	rab18a	100	86.893	Seriola_lalandi_dorsalis
ENSCPBG00000015839	-	100	96.117	ENSSPUG00000017677	-	100	96.117	Sphenodon_punctatus
ENSCPBG00000015839	-	100	84.951	ENSTRUG00000004984	rab18a	100	84.951	Takifugu_rubripes
ENSCPBG00000015839	-	100	94.175	ENSUMAG00000015574	-	100	94.175	Ursus_maritimus
ENSCPBG00000015839	-	100	91.748	ENSXETG00000004556	rab18	100	91.748	Xenopus_tropicalis
ENSCPBG00000015839	-	93	88.482	ENSXMAG00000024122	rab18a	100	87.379	Xiphophorus_maculatus