EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000015853 (Gene tree)
Gene ID: 101940251
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 54956 bases
Position: chrKK083154.1:1131206-1186161
Accession: 10770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000022144	CPSF_A	PF03178.15	5.2e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000026062	SF3B3-201	4782	XM_005310120	ENSCPBP00000022144	1217 (aa)	XP_005310177	UPI000388FCA7

Gene Model

Click here to download ENSCPBG00000015853's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000015853's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000015853	SF3B3	100	98.850	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSCPBG00000015853	SF3B3	96	93.168	ENSAPOG00000006172	sf3b3	98	93.168	Acanthochromis_polyacanthus
ENSCPBG00000015853	SF3B3	100	98.689	ENSAMEG00000002187	SF3B3	100	98.689	Ailuropoda_melanoleuca
ENSCPBG00000015853	SF3B3	92	90.268	ENSACIG00000016487	sf3b3	100	90.268	Amphilophus_citrinellus
ENSCPBG00000015853	SF3B3	100	93.098	ENSAOCG00000007158	sf3b3	100	93.098	Amphiprion_ocellaris
ENSCPBG00000015853	SF3B3	100	93.098	ENSAPEG00000022786	sf3b3	100	93.098	Amphiprion_percula
ENSCPBG00000015853	SF3B3	100	93.180	ENSATEG00000013708	sf3b3	100	93.180	Anabas_testudineus
ENSCPBG00000015853	SF3B3	81	96.960	ENSAPLG00000004996	SF3B3	100	96.960	Anas_platyrhynchos
ENSCPBG00000015853	SF3B3	100	98.521	ENSACAG00000001817	SF3B3	100	98.521	Anolis_carolinensis
ENSCPBG00000015853	SF3B3	100	98.850	ENSANAG00000028001	SF3B3	100	98.850	Aotus_nancymaae
ENSCPBG00000015853	SF3B3	96	92.827	ENSACLG00000022555	sf3b3	98	92.827	Astatotilapia_calliptera
ENSCPBG00000015853	SF3B3	100	93.016	ENSAMXG00000003410	sf3b3	100	93.016	Astyanax_mexicanus
ENSCPBG00000015853	SF3B3	100	98.850	ENSBTAG00000010627	SF3B3	100	98.850	Bos_taurus
ENSCPBG00000015853	SF3B3	100	60.212	WBGene00019323	teg-4	100	60.212	Caenorhabditis_elegans
ENSCPBG00000015853	SF3B3	100	98.850	ENSCJAG00000014773	SF3B3	99	98.850	Callithrix_jacchus
ENSCPBG00000015853	SF3B3	100	98.932	ENSCAFG00000020151	SF3B3	100	98.932	Canis_familiaris
ENSCPBG00000015853	SF3B3	100	98.932	ENSCAFG00020020912	SF3B3	100	98.932	Canis_lupus_dingo
ENSCPBG00000015853	SF3B3	100	98.932	ENSCHIG00000019822	SF3B3	100	98.932	Capra_hircus
ENSCPBG00000015853	SF3B3	100	98.850	ENSTSYG00000007910	SF3B3	100	98.850	Carlito_syrichta
ENSCPBG00000015853	SF3B3	84	87.643	ENSCAPG00000001484	SF3B3	92	87.643	Cavia_aperea
ENSCPBG00000015853	SF3B3	100	97.535	ENSCPOG00000000586	SF3B3	100	97.535	Cavia_porcellus
ENSCPBG00000015853	SF3B3	100	98.850	ENSCCAG00000017736	SF3B3	100	98.850	Cebus_capucinus
ENSCPBG00000015853	SF3B3	100	98.850	ENSCATG00000036562	SF3B3	100	98.850	Cercocebus_atys
ENSCPBG00000015853	SF3B3	100	98.850	ENSCLAG00000003921	SF3B3	100	98.850	Chinchilla_lanigera
ENSCPBG00000015853	SF3B3	100	98.767	ENSCSAG00000004371	SF3B3	100	98.767	Chlorocebus_sabaeus
ENSCPBG00000015853	SF3B3	90	93.146	ENSCHOG00000001878	SF3B3	90	93.146	Choloepus_hoffmanni
ENSCPBG00000015853	SF3B3	100	80.952	ENSCING00000001342	-	100	80.952	Ciona_intestinalis
ENSCPBG00000015853	SF3B3	99	79.475	ENSCSAVG00000011454	-	100	79.475	Ciona_savignyi
ENSCPBG00000015853	SF3B3	100	95.563	ENSCANG00000042920	SF3B3	100	95.563	Colobus_angolensis_palliatus
ENSCPBG00000015853	SF3B3	100	98.767	ENSCGRG00001015908	Sf3b3	100	98.767	Cricetulus_griseus_chok1gshd
ENSCPBG00000015853	SF3B3	100	98.767	ENSCGRG00000010180	Sf3b3	100	98.767	Cricetulus_griseus_crigri
ENSCPBG00000015853	SF3B3	82	92.315	ENSCSEG00000014192	sf3b3	99	92.315	Cynoglossus_semilaevis
ENSCPBG00000015853	SF3B3	100	92.276	ENSCVAG00000010459	sf3b3	100	92.276	Cyprinodon_variegatus
ENSCPBG00000015853	SF3B3	100	93.180	ENSDARG00000103553	sf3b3	100	93.180	Danio_rerio
ENSCPBG00000015853	SF3B3	85	98.746	ENSDNOG00000043626	SF3B3	100	98.746	Dasypus_novemcinctus
ENSCPBG00000015853	SF3B3	100	98.850	ENSDORG00000014176	Sf3b3	100	98.850	Dipodomys_ordii
ENSCPBG00000015853	SF3B3	100	75.143	FBgn0035162	Sf3b3	100	75.143	Drosophila_melanogaster
ENSCPBG00000015853	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSCPBG00000015853	SF3B3	100	87.428	ENSEBUG00000006117	sf3b3	100	87.428	Eptatretus_burgeri
ENSCPBG00000015853	SF3B3	100	98.932	ENSEASG00005013376	SF3B3	100	98.932	Equus_asinus_asinus
ENSCPBG00000015853	SF3B3	100	98.932	ENSECAG00000014053	SF3B3	100	98.932	Equus_caballus
ENSCPBG00000015853	SF3B3	93	98.036	ENSEEUG00000015611	SF3B3	93	98.036	Erinaceus_europaeus
ENSCPBG00000015853	SF3B3	100	91.230	ENSELUG00000015417	sf3b3	100	91.230	Esox_lucius
ENSCPBG00000015853	SF3B3	100	98.932	ENSFCAG00000009487	SF3B3	100	98.932	Felis_catus
ENSCPBG00000015853	SF3B3	100	98.110	ENSFALG00000007372	SF3B3	100	98.110	Ficedula_albicollis
ENSCPBG00000015853	SF3B3	100	98.767	ENSFDAG00000002608	SF3B3	100	98.767	Fukomys_damarensis
ENSCPBG00000015853	SF3B3	100	92.687	ENSFHEG00000017824	sf3b3	100	92.687	Fundulus_heteroclitus
ENSCPBG00000015853	SF3B3	100	89.245	ENSGMOG00000008139	sf3b3	100	89.245	Gadus_morhua
ENSCPBG00000015853	SF3B3	100	98.357	ENSGALG00000002531	SF3B3	100	98.357	Gallus_gallus
ENSCPBG00000015853	SF3B3	100	92.440	ENSGAFG00000015206	sf3b3	100	92.440	Gambusia_affinis
ENSCPBG00000015853	SF3B3	100	92.693	ENSGACG00000002646	sf3b3	100	92.693	Gasterosteus_aculeatus
ENSCPBG00000015853	SF3B3	96	99.915	ENSGAGG00000006746	SF3B3	97	99.915	Gopherus_agassizii
ENSCPBG00000015853	SF3B3	100	98.850	ENSGGOG00000003246	SF3B3	100	98.850	Gorilla_gorilla
ENSCPBG00000015853	SF3B3	92	85.357	ENSHBUG00000005960	sf3b3	100	86.518	Haplochromis_burtoni
ENSCPBG00000015853	SF3B3	100	98.850	ENSHGLG00000010135	SF3B3	100	98.850	Heterocephalus_glaber_female
ENSCPBG00000015853	SF3B3	100	96.675	ENSHGLG00100011148	SF3B3	100	96.675	Heterocephalus_glaber_male
ENSCPBG00000015853	SF3B3	100	92.523	ENSHCOG00000011981	sf3b3	100	92.523	Hippocampus_comes
ENSCPBG00000015853	SF3B3	100	93.098	ENSIPUG00000020435	sf3b3	100	93.098	Ictalurus_punctatus
ENSCPBG00000015853	SF3B3	100	98.850	ENSSTOG00000007065	SF3B3	100	98.850	Ictidomys_tridecemlineatus
ENSCPBG00000015853	SF3B3	100	98.850	ENSJJAG00000003948	Sf3b3	100	98.850	Jaculus_jaculus
ENSCPBG00000015853	SF3B3	100	90.551	ENSKMAG00000004066	sf3b3	99	92.741	Kryptolebias_marmoratus
ENSCPBG00000015853	SF3B3	100	92.605	ENSLBEG00000018302	sf3b3	100	92.605	Labrus_bergylta
ENSCPBG00000015853	SF3B3	98	92.027	ENSLACG00000012501	SF3B3	99	92.027	Latimeria_chalumnae
ENSCPBG00000015853	SF3B3	100	94.007	ENSLOCG00000007566	sf3b3	100	94.007	Lepisosteus_oculatus
ENSCPBG00000015853	SF3B3	100	98.932	ENSLAFG00000012219	SF3B3	100	98.932	Loxodonta_africana
ENSCPBG00000015853	SF3B3	100	98.850	ENSMFAG00000045487	SF3B3	100	98.850	Macaca_fascicularis
ENSCPBG00000015853	SF3B3	100	98.850	ENSMMUG00000017812	SF3B3	100	98.850	Macaca_mulatta
ENSCPBG00000015853	SF3B3	100	98.850	ENSMNEG00000033385	SF3B3	100	98.850	Macaca_nemestrina
ENSCPBG00000015853	SF3B3	100	95.316	ENSMLEG00000043891	SF3B3	100	95.316	Mandrillus_leucophaeus
ENSCPBG00000015853	SF3B3	100	93.180	ENSMAMG00000016837	sf3b3	100	93.180	Mastacembelus_armatus
ENSCPBG00000015853	SF3B3	100	92.769	ENSMZEG00005010836	sf3b3	100	92.769	Maylandia_zebra
ENSCPBG00000015853	SF3B3	89	89.824	ENSMZEG00005026015	sf3b3	99	89.824	Maylandia_zebra
ENSCPBG00000015853	SF3B3	100	98.357	ENSMGAG00000001597	SF3B3	100	98.357	Meleagris_gallopavo
ENSCPBG00000015853	SF3B3	81	82.011	ENSMAUG00000013618	Sf3b3	95	82.011	Mesocricetus_auratus
ENSCPBG00000015853	SF3B3	100	97.703	ENSMICG00000001363	SF3B3	100	97.703	Microcebus_murinus
ENSCPBG00000015853	SF3B3	100	98.767	ENSMOCG00000006108	Sf3b3	100	98.767	Microtus_ochrogaster
ENSCPBG00000015853	SF3B3	89	90.194	ENSMMOG00000002598	sf3b3	97	90.194	Mola_mola
ENSCPBG00000015853	SF3B3	100	94.663	ENSMODG00000014363	SF3B3	100	94.663	Monodelphis_domestica
ENSCPBG00000015853	SF3B3	100	92.851	ENSMALG00000008014	sf3b3	100	92.851	Monopterus_albus
ENSCPBG00000015853	SF3B3	100	98.767	MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.767	Mus_caroli
ENSCPBG00000015853	SF3B3	100	98.767	ENSMUSG00000033732	Sf3b3	100	98.767	Mus_musculus
ENSCPBG00000015853	SF3B3	100	98.685	MGP_SPRETEiJ_G0032681	Sf3b3	100	98.685	Mus_spretus
ENSCPBG00000015853	SF3B3	100	98.932	ENSMPUG00000010277	SF3B3	100	98.932	Mustela_putorius_furo
ENSCPBG00000015853	SF3B3	100	98.850	ENSMLUG00000014607	SF3B3	100	98.850	Myotis_lucifugus
ENSCPBG00000015853	SF3B3	100	98.850	ENSNGAG00000021903	Sf3b3	100	98.850	Nannospalax_galili
ENSCPBG00000015853	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSCPBG00000015853	SF3B3	100	97.373	ENSNLEG00000016127	SF3B3	100	97.373	Nomascus_leucogenys
ENSCPBG00000015853	SF3B3	92	97.625	ENSMEUG00000004479	SF3B3	94	97.625	Notamacropus_eugenii
ENSCPBG00000015853	SF3B3	98	95.641	ENSOPRG00000009847	SF3B3	100	95.641	Ochotona_princeps
ENSCPBG00000015853	SF3B3	100	98.767	ENSODEG00000014154	SF3B3	100	98.767	Octodon_degus
ENSCPBG00000015853	SF3B3	100	93.016	ENSONIG00000011198	sf3b3	100	93.016	Oreochromis_niloticus
ENSCPBG00000015853	SF3B3	100	99.014	ENSOANG00000001161	-	100	99.014	Ornithorhynchus_anatinus
ENSCPBG00000015853	SF3B3	100	96.467	ENSOCUG00000004139	SF3B3	100	96.467	Oryctolagus_cuniculus
ENSCPBG00000015853	SF3B3	100	92.851	ENSORLG00000013472	sf3b3	100	92.851	Oryzias_latipes
ENSCPBG00000015853	SF3B3	100	92.851	ENSORLG00020017473	sf3b3	100	92.851	Oryzias_latipes_hni
ENSCPBG00000015853	SF3B3	100	92.851	ENSORLG00015007710	sf3b3	100	92.851	Oryzias_latipes_hsok
ENSCPBG00000015853	SF3B3	100	92.523	ENSOMEG00000014483	sf3b3	100	92.523	Oryzias_melastigma
ENSCPBG00000015853	SF3B3	100	98.443	ENSOGAG00000016051	SF3B3	100	98.443	Otolemur_garnettii
ENSCPBG00000015853	SF3B3	100	98.689	ENSOARG00000004816	SF3B3	100	98.689	Ovis_aries
ENSCPBG00000015853	SF3B3	100	98.850	ENSPPAG00000026807	SF3B3	100	98.850	Pan_paniscus
ENSCPBG00000015853	SF3B3	100	98.932	ENSPPRG00000001686	SF3B3	100	98.932	Panthera_pardus
ENSCPBG00000015853	SF3B3	89	95.860	ENSPTIG00000020382	SF3B3	100	95.860	Panthera_tigris_altaica
ENSCPBG00000015853	SF3B3	100	98.850	ENSPTRG00000008308	SF3B3	100	98.850	Pan_troglodytes
ENSCPBG00000015853	SF3B3	100	98.850	ENSPANG00000024075	SF3B3	100	98.850	Papio_anubis
ENSCPBG00000015853	SF3B3	100	92.440	ENSPKIG00000002712	sf3b3	100	92.440	Paramormyrops_kingsleyae
ENSCPBG00000015853	SF3B3	89	99.264	ENSPSIG00000002232	SF3B3	100	99.264	Pelodiscus_sinensis
ENSCPBG00000015853	SF3B3	100	98.767	ENSPEMG00000008603	Sf3b3	100	98.767	Peromyscus_maniculatus_bairdii
ENSCPBG00000015853	SF3B3	100	91.619	ENSPMAG00000001793	sf3b3	100	91.619	Petromyzon_marinus
ENSCPBG00000015853	SF3B3	100	99.014	ENSPCIG00000014927	SF3B3	100	99.014	Phascolarctos_cinereus
ENSCPBG00000015853	SF3B3	100	92.358	ENSPFOG00000015516	sf3b3	100	92.358	Poecilia_formosa
ENSCPBG00000015853	SF3B3	100	92.358	ENSPLAG00000014330	sf3b3	100	92.358	Poecilia_latipinna
ENSCPBG00000015853	SF3B3	100	92.440	ENSPMEG00000019856	sf3b3	100	92.440	Poecilia_mexicana
ENSCPBG00000015853	SF3B3	81	93.293	ENSPREG00000019669	sf3b3	97	93.293	Poecilia_reticulata
ENSCPBG00000015853	SF3B3	95	98.637	ENSPPYG00000007539	SF3B3	100	98.637	Pongo_abelii
ENSCPBG00000015853	SF3B3	100	77.403	ENSPCAG00000002623	SF3B3	100	77.403	Procavia_capensis
ENSCPBG00000015853	SF3B3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSCPBG00000015853	SF3B3	100	98.850	ENSPVAG00000000684	SF3B3	100	98.850	Pteropus_vampyrus
ENSCPBG00000015853	SF3B3	100	92.851	ENSPNYG00000003528	sf3b3	100	92.851	Pundamilia_nyererei
ENSCPBG00000015853	SF3B3	100	93.180	ENSPNAG00000015419	sf3b3	100	93.180	Pygocentrus_nattereri
ENSCPBG00000015853	SF3B3	100	98.767	ENSRNOG00000017724	Sf3b3	100	98.767	Rattus_norvegicus
ENSCPBG00000015853	SF3B3	100	98.850	ENSRBIG00000021904	SF3B3	100	98.850	Rhinopithecus_bieti
ENSCPBG00000015853	SF3B3	100	98.850	ENSRROG00000045703	SF3B3	100	98.850	Rhinopithecus_roxellana
ENSCPBG00000015853	SF3B3	100	98.850	ENSSBOG00000029156	SF3B3	100	98.850	Saimiri_boliviensis_boliviensis
ENSCPBG00000015853	SF3B3	100	99.014	ENSSHAG00000000372	SF3B3	100	99.014	Sarcophilus_harrisii
ENSCPBG00000015853	SF3B3	100	93.591	ENSSFOG00015012877	sf3b3	100	93.591	Scleropages_formosus
ENSCPBG00000015853	SF3B3	100	92.523	ENSSMAG00000014386	sf3b3	100	92.523	Scophthalmus_maximus
ENSCPBG00000015853	SF3B3	100	93.262	ENSSDUG00000021201	sf3b3	100	93.262	Seriola_dumerili
ENSCPBG00000015853	SF3B3	100	93.180	ENSSLDG00000017532	sf3b3	100	93.180	Seriola_lalandi_dorsalis
ENSCPBG00000015853	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSCPBG00000015853	SF3B3	100	98.521	ENSSPUG00000006253	SF3B3	100	98.521	Sphenodon_punctatus
ENSCPBG00000015853	SF3B3	100	85.374	ENSSPAG00000003125	sf3b3	100	85.374	Stegastes_partitus
ENSCPBG00000015853	SF3B3	100	98.932	ENSSSCG00000025323	SF3B3	100	98.932	Sus_scrofa
ENSCPBG00000015853	SF3B3	100	98.276	ENSTGUG00000006082	SF3B3	100	98.276	Taeniopygia_guttata
ENSCPBG00000015853	SF3B3	89	92.831	ENSTNIG00000004857	sf3b3	100	92.831	Tetraodon_nigroviridis
ENSCPBG00000015853	SF3B3	93	83.539	ENSTBEG00000002946	SF3B3	100	83.539	Tupaia_belangeri
ENSCPBG00000015853	SF3B3	100	98.110	ENSTTRG00000005855	SF3B3	100	98.110	Tursiops_truncatus
ENSCPBG00000015853	SF3B3	100	98.932	ENSUAMG00000006780	SF3B3	100	98.932	Ursus_americanus
ENSCPBG00000015853	SF3B3	100	98.932	ENSUMAG00000017757	SF3B3	100	98.932	Ursus_maritimus
ENSCPBG00000015853	SF3B3	100	82.909	ENSVPAG00000003202	SF3B3	100	82.909	Vicugna_pacos
ENSCPBG00000015853	SF3B3	100	98.850	ENSVVUG00000017922	SF3B3	100	98.850	Vulpes_vulpes
ENSCPBG00000015853	SF3B3	100	96.056	ENSXETG00000032869	SF3B3	100	96.056	Xenopus_tropicalis
ENSCPBG00000015853	SF3B3	77	94.055	ENSXCOG00000013628	sf3b3	97	94.055	Xiphophorus_couchianus
ENSCPBG00000015853	SF3B3	100	92.523	ENSXMAG00000006334	sf3b3	99	93.699	Xiphophorus_maculatus