EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000016132 (Gene tree)
Gene ID: 101938628
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 5669 bases
Position: chr15:14236651-14242319
Accession: 30081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000022580	UPF0086	PF01868.16	2.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000026590	POP4-201	1312	-	ENSCPBP00000022580	220 (aa)	XP_005289917	UPI000388F8BB

Gene Model

Click here to download ENSCPBG00000016132's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03008	Ribosome biogenesis in eukaryotes	KEGG
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016132	POP4	100	74.091	ENSG00000105171	POP4	100	87.500	Homo_sapiens
ENSCPBG00000016132	POP4	99	70.642	ENSAMEG00000018329	-	99	70.642	Ailuropoda_melanoleuca
ENSCPBG00000016132	POP4	94	63.636	ENSAMEG00000003172	-	94	63.636	Ailuropoda_melanoleuca
ENSCPBG00000016132	POP4	99	57.534	ENSACIG00000008358	pop4	99	57.534	Amphilophus_citrinellus
ENSCPBG00000016132	POP4	91	61.386	ENSAOCG00000010116	pop4	98	60.891	Amphiprion_ocellaris
ENSCPBG00000016132	POP4	99	57.919	ENSAPEG00000002829	pop4	93	57.466	Amphiprion_percula
ENSCPBG00000016132	POP4	100	57.658	ENSATEG00000013028	pop4	100	57.207	Anabas_testudineus
ENSCPBG00000016132	POP4	92	84.653	ENSAPLG00000014051	POP4	98	84.653	Anas_platyrhynchos
ENSCPBG00000016132	POP4	100	73.636	ENSANAG00000020295	POP4	100	73.636	Aotus_nancymaae
ENSCPBG00000016132	POP4	99	57.466	ENSACLG00000000526	pop4	99	55.708	Astatotilapia_calliptera
ENSCPBG00000016132	POP4	100	61.818	ENSAMXG00000002899	pop4	100	61.818	Astyanax_mexicanus
ENSCPBG00000016132	POP4	100	75.455	ENSBTAG00000002223	POP4	100	75.455	Bos_taurus
ENSCPBG00000016132	POP4	70	30.128	WBGene00007603	C15C6.4	62	30.709	Caenorhabditis_elegans
ENSCPBG00000016132	POP4	100	73.303	ENSCJAG00000046750	POP4	98	78.531	Callithrix_jacchus
ENSCPBG00000016132	POP4	83	74.725	ENSCAFG00000007630	POP4	100	74.725	Canis_familiaris
ENSCPBG00000016132	POP4	100	74.091	ENSCHIG00000016743	POP4	100	74.091	Capra_hircus
ENSCPBG00000016132	POP4	100	70.909	ENSTSYG00000003488	POP4	100	70.909	Carlito_syrichta
ENSCPBG00000016132	POP4	99	51.152	ENSCAPG00000011105	POP4	100	51.152	Cavia_aperea
ENSCPBG00000016132	POP4	100	70.000	ENSCPOG00000002992	POP4	100	70.000	Cavia_porcellus
ENSCPBG00000016132	POP4	100	73.636	ENSCCAG00000020285	-	100	73.636	Cebus_capucinus
ENSCPBG00000016132	POP4	100	62.727	ENSCCAG00000034244	-	100	62.727	Cebus_capucinus
ENSCPBG00000016132	POP4	100	74.091	ENSCATG00000036022	POP4	100	86.458	Cercocebus_atys
ENSCPBG00000016132	POP4	100	70.455	ENSCLAG00000013162	POP4	100	70.455	Chinchilla_lanigera
ENSCPBG00000016132	POP4	99	74.312	ENSCSAG00000004868	POP4	100	74.312	Chlorocebus_sabaeus
ENSCPBG00000016132	POP4	98	54.167	ENSCHOG00000002071	POP4	100	53.917	Choloepus_hoffmanni
ENSCPBG00000016132	POP4	84	31.414	ENSCING00000023871	-	94	30.570	Ciona_intestinalis
ENSCPBG00000016132	POP4	92	76.238	ENSCANG00000005924	POP4	100	76.238	Colobus_angolensis_palliatus
ENSCPBG00000016132	POP4	100	70.909	ENSCGRG00001017185	Pop4	100	69.545	Cricetulus_griseus_chok1gshd
ENSCPBG00000016132	POP4	100	70.909	ENSCGRG00000008155	Pop4	100	69.545	Cricetulus_griseus_crigri
ENSCPBG00000016132	POP4	99	52.055	ENSCSEG00000002946	pop4	99	52.055	Cynoglossus_semilaevis
ENSCPBG00000016132	POP4	99	43.891	ENSCVAG00000018602	POP4	95	44.344	Cyprinodon_variegatus
ENSCPBG00000016132	POP4	100	65.000	ENSDARG00000101472	pop4	100	65.000	Danio_rerio
ENSCPBG00000016132	POP4	100	73.182	ENSDNOG00000047663	POP4	88	73.182	Dasypus_novemcinctus
ENSCPBG00000016132	POP4	78	66.860	ENSDORG00000008577	Pop4	100	66.860	Dipodomys_ordii
ENSCPBG00000016132	POP4	67	34.194	FBgn0035831	CG8038	71	36.735	Drosophila_melanogaster
ENSCPBG00000016132	POP4	99	61.290	ENSETEG00000003607	POP4	100	61.290	Echinops_telfairi
ENSCPBG00000016132	POP4	100	41.629	ENSEBUG00000008575	pop4	100	41.629	Eptatretus_burgeri
ENSCPBG00000016132	POP4	90	41.429	ENSEBUG00000004305	pop4	91	41.429	Eptatretus_burgeri
ENSCPBG00000016132	POP4	91	46.262	ENSEBUG00000010447	pop4	82	46.667	Eptatretus_burgeri
ENSCPBG00000016132	POP4	100	76.923	ENSECAG00000020206	POP4	78	76.923	Equus_caballus
ENSCPBG00000016132	POP4	90	57.868	ENSEEUG00000013109	POP4	99	57.868	Erinaceus_europaeus
ENSCPBG00000016132	POP4	100	61.364	ENSELUG00000019812	pop4	100	61.364	Esox_lucius
ENSCPBG00000016132	POP4	100	72.727	ENSFCAG00000001619	POP4	100	72.727	Felis_catus
ENSCPBG00000016132	POP4	98	77.315	ENSFALG00000000206	POP4	96	77.315	Ficedula_albicollis
ENSCPBG00000016132	POP4	100	70.909	ENSFDAG00000017859	POP4	100	70.909	Fukomys_damarensis
ENSCPBG00000016132	POP4	96	53.488	ENSFHEG00000012745	pop4	96	53.023	Fundulus_heteroclitus
ENSCPBG00000016132	POP4	90	61.692	ENSGMOG00000000335	pop4	99	61.194	Gadus_morhua
ENSCPBG00000016132	POP4	100	81.364	ENSGALG00000041972	POP4	92	81.364	Gallus_gallus
ENSCPBG00000016132	POP4	79	49.718	ENSGAFG00000003571	pop4	98	49.153	Gambusia_affinis
ENSCPBG00000016132	POP4	99	59.729	ENSGACG00000014510	pop4	93	68.605	Gasterosteus_aculeatus
ENSCPBG00000016132	POP4	100	94.545	ENSGAGG00000024544	POP4	79	94.545	Gopherus_agassizii
ENSCPBG00000016132	POP4	99	74.312	ENSGGOG00000038346	POP4	99	74.312	Gorilla_gorilla
ENSCPBG00000016132	POP4	99	56.561	ENSHBUG00000021821	pop4	99	54.795	Haplochromis_burtoni
ENSCPBG00000016132	POP4	99	70.183	ENSHGLG00000015798	POP4	99	70.183	Heterocephalus_glaber_female
ENSCPBG00000016132	POP4	100	70.000	ENSHGLG00100009737	POP4	100	70.000	Heterocephalus_glaber_male
ENSCPBG00000016132	POP4	99	56.306	ENSHCOG00000020937	pop4	99	56.306	Hippocampus_comes
ENSCPBG00000016132	POP4	100	60.909	ENSIPUG00000013652	pop4	100	60.909	Ictalurus_punctatus
ENSCPBG00000016132	POP4	100	71.818	ENSSTOG00000011016	POP4	100	71.818	Ictidomys_tridecemlineatus
ENSCPBG00000016132	POP4	100	71.818	ENSJJAG00000013376	Pop4	100	71.818	Jaculus_jaculus
ENSCPBG00000016132	POP4	99	59.729	ENSKMAG00000012250	pop4	99	59.729	Kryptolebias_marmoratus
ENSCPBG00000016132	POP4	99	53.394	ENSLBEG00000014139	pop4	99	52.941	Labrus_bergylta
ENSCPBG00000016132	POP4	99	53.394	ENSLBEG00000018846	-	99	52.941	Labrus_bergylta
ENSCPBG00000016132	POP4	100	70.455	ENSLACG00000008581	POP4	99	70.455	Latimeria_chalumnae
ENSCPBG00000016132	POP4	100	75.000	ENSLOCG00000005597	pop4	100	75.000	Lepisosteus_oculatus
ENSCPBG00000016132	POP4	100	71.364	ENSLAFG00000000084	POP4	100	71.364	Loxodonta_africana
ENSCPBG00000016132	POP4	100	74.545	ENSMFAG00000029606	POP4	100	74.545	Macaca_fascicularis
ENSCPBG00000016132	POP4	100	73.303	ENSMMUG00000017424	POP4	100	73.756	Macaca_mulatta
ENSCPBG00000016132	POP4	100	73.303	ENSMNEG00000031374	POP4	100	73.756	Macaca_nemestrina
ENSCPBG00000016132	POP4	100	74.545	ENSMLEG00000043454	POP4	100	74.545	Mandrillus_leucophaeus
ENSCPBG00000016132	POP4	99	58.371	ENSMAMG00000011716	pop4	99	57.919	Mastacembelus_armatus
ENSCPBG00000016132	POP4	99	57.466	ENSMZEG00005002360	pop4	99	55.708	Maylandia_zebra
ENSCPBG00000016132	POP4	99	81.651	ENSMGAG00000005337	POP4	97	81.651	Meleagris_gallopavo
ENSCPBG00000016132	POP4	100	69.091	ENSMAUG00000020110	Pop4	100	69.091	Mesocricetus_auratus
ENSCPBG00000016132	POP4	99	67.431	ENSMICG00000035730	POP4	98	67.431	Microcebus_murinus
ENSCPBG00000016132	POP4	99	56.621	ENSMMOG00000015321	pop4	99	56.621	Mola_mola
ENSCPBG00000016132	POP4	99	73.516	ENSMODG00000029406	POP4	95	73.516	Monodelphis_domestica
ENSCPBG00000016132	POP4	99	58.904	ENSMALG00000012571	pop4	99	58.904	Monopterus_albus
ENSCPBG00000016132	POP4	100	69.683	MGP_CAROLIEiJ_G0029600	Pop4	100	69.683	Mus_caroli
ENSCPBG00000016132	POP4	100	68.778	ENSMUSG00000030423	Pop4	100	68.778	Mus_musculus
ENSCPBG00000016132	POP4	100	69.545	MGP_SPRETEiJ_G0030699	Pop4	100	68.636	Mus_spretus
ENSCPBG00000016132	POP4	100	60.633	ENSMPUG00000008063	-	100	60.633	Mustela_putorius_furo
ENSCPBG00000016132	POP4	100	71.364	ENSMPUG00000008041	-	100	71.364	Mustela_putorius_furo
ENSCPBG00000016132	POP4	99	57.534	ENSMLUG00000010774	POP4	99	57.534	Myotis_lucifugus
ENSCPBG00000016132	POP4	57	80.800	ENSMEUG00000003636	-	100	80.800	Notamacropus_eugenii
ENSCPBG00000016132	POP4	90	74.747	ENSOPRG00000004736	POP4	99	74.747	Ochotona_princeps
ENSCPBG00000016132	POP4	99	70.046	ENSODEG00000013025	POP4	98	71.981	Octodon_degus
ENSCPBG00000016132	POP4	99	55.251	ENSONIG00000003458	pop4	97	55.251	Oreochromis_niloticus
ENSCPBG00000016132	POP4	100	72.273	ENSOCUG00000015974	POP4	100	72.273	Oryctolagus_cuniculus
ENSCPBG00000016132	POP4	99	55.656	ENSORLG00000020317	pop4	99	55.204	Oryzias_latipes
ENSCPBG00000016132	POP4	99	55.204	ENSORLG00015011624	pop4	99	54.751	Oryzias_latipes_hsok
ENSCPBG00000016132	POP4	99	55.656	ENSOMEG00000002538	pop4	99	56.109	Oryzias_melastigma
ENSCPBG00000016132	POP4	99	69.266	ENSOGAG00000011168	POP4	99	69.266	Otolemur_garnettii
ENSCPBG00000016132	POP4	100	73.756	ENSOARG00000004041	POP4	100	73.756	Ovis_aries
ENSCPBG00000016132	POP4	100	74.545	ENSPPAG00000040372	POP4	100	74.545	Pan_paniscus
ENSCPBG00000016132	POP4	100	72.727	ENSPPRG00000010502	POP4	100	72.727	Panthera_pardus
ENSCPBG00000016132	POP4	100	72.727	ENSPTIG00000016598	POP4	100	72.727	Panthera_tigris_altaica
ENSCPBG00000016132	POP4	100	74.545	ENSPTRG00000010779	POP4	100	74.545	Pan_troglodytes
ENSCPBG00000016132	POP4	100	74.545	ENSPANG00000008546	POP4	100	74.545	Papio_anubis
ENSCPBG00000016132	POP4	90	70.149	ENSPKIG00000004468	pop4	88	69.652	Paramormyrops_kingsleyae
ENSCPBG00000016132	POP4	100	95.909	ENSPSIG00000015690	POP4	100	96.535	Pelodiscus_sinensis
ENSCPBG00000016132	POP4	91	57.561	ENSPMGG00000008608	pop4	98	57.561	Periophthalmus_magnuspinnatus
ENSCPBG00000016132	POP4	99	57.339	ENSPEMG00000019982	-	100	57.339	Peromyscus_maniculatus_bairdii
ENSCPBG00000016132	POP4	100	68.636	ENSPEMG00000014034	-	94	71.782	Peromyscus_maniculatus_bairdii
ENSCPBG00000016132	POP4	83	52.020	ENSPMAG00000006265	pop4	100	52.020	Petromyzon_marinus
ENSCPBG00000016132	POP4	100	74.091	ENSPCIG00000024738	POP4	95	74.091	Phascolarctos_cinereus
ENSCPBG00000016132	POP4	99	56.364	ENSPFOG00000000925	pop4	99	56.364	Poecilia_formosa
ENSCPBG00000016132	POP4	99	56.818	ENSPLAG00000003161	pop4	99	56.818	Poecilia_latipinna
ENSCPBG00000016132	POP4	99	56.364	ENSPMEG00000002475	pop4	99	56.364	Poecilia_mexicana
ENSCPBG00000016132	POP4	99	55.455	ENSPREG00000022403	pop4	93	55.455	Poecilia_reticulata
ENSCPBG00000016132	POP4	100	74.545	ENSPPYG00000009805	POP4	100	74.545	Pongo_abelii
ENSCPBG00000016132	POP4	99	69.266	ENSPCAG00000007737	POP4	99	68.950	Procavia_capensis
ENSCPBG00000016132	POP4	100	70.000	ENSPCOG00000018055	POP4	100	70.000	Propithecus_coquereli
ENSCPBG00000016132	POP4	100	72.273	ENSPVAG00000006069	POP4	100	72.273	Pteropus_vampyrus
ENSCPBG00000016132	POP4	99	57.466	ENSPNYG00000020038	pop4	99	55.708	Pundamilia_nyererei
ENSCPBG00000016132	POP4	100	60.909	ENSPNAG00000005591	pop4	100	60.909	Pygocentrus_nattereri
ENSCPBG00000016132	POP4	100	69.231	ENSRNOG00000027646	Pop4	100	69.231	Rattus_norvegicus
ENSCPBG00000016132	POP4	80	70.286	ENSRBIG00000044769	POP4	89	75.362	Rhinopithecus_bieti
ENSCPBG00000016132	POP4	100	74.091	ENSRROG00000028903	POP4	100	74.091	Rhinopithecus_roxellana
ENSCPBG00000016132	POP4	61	31.757	YBR257W	-	52	31.757	Saccharomyces_cerevisiae
ENSCPBG00000016132	POP4	100	73.182	ENSSBOG00000032445	POP4	100	73.182	Saimiri_boliviensis_boliviensis
ENSCPBG00000016132	POP4	99	74.312	ENSSHAG00000016888	POP4	99	74.312	Sarcophilus_harrisii
ENSCPBG00000016132	POP4	99	63.134	ENSSFOG00015014556	pop4	98	62.557	Scleropages_formosus
ENSCPBG00000016132	POP4	99	58.824	ENSSMAG00000016611	pop4	99	59.276	Scophthalmus_maximus
ENSCPBG00000016132	POP4	99	56.561	ENSSDUG00000019865	pop4	89	56.109	Seriola_dumerili
ENSCPBG00000016132	POP4	99	57.014	ENSSLDG00000001763	pop4	99	56.561	Seriola_lalandi_dorsalis
ENSCPBG00000016132	POP4	99	74.194	ENSSARG00000004748	POP4	100	74.194	Sorex_araneus
ENSCPBG00000016132	POP4	99	59.276	ENSSPAG00000014364	pop4	99	58.824	Stegastes_partitus
ENSCPBG00000016132	POP4	100	73.636	ENSSSCG00000002854	POP4	100	73.636	Sus_scrofa
ENSCPBG00000016132	POP4	91	83.500	ENSTGUG00000008953	POP4	100	83.500	Taeniopygia_guttata
ENSCPBG00000016132	POP4	92	59.113	ENSTNIG00000006401	pop4	100	59.113	Tetraodon_nigroviridis
ENSCPBG00000016132	POP4	100	71.493	ENSTBEG00000002194	POP4	100	71.493	Tupaia_belangeri
ENSCPBG00000016132	POP4	100	75.909	ENSTTRG00000005882	POP4	100	75.909	Tursiops_truncatus
ENSCPBG00000016132	POP4	100	70.455	ENSUAMG00000003049	-	100	70.455	Ursus_americanus
ENSCPBG00000016132	POP4	100	70.455	ENSUMAG00000007522	-	100	70.455	Ursus_maritimus
ENSCPBG00000016132	POP4	95	72.115	ENSVVUG00000016876	-	73	72.115	Vulpes_vulpes
ENSCPBG00000016132	POP4	98	68.981	ENSXETG00000017598	pop4	98	68.981	Xenopus_tropicalis
ENSCPBG00000016132	POP4	99	55.856	ENSXCOG00000017695	pop4	93	55.405	Xiphophorus_couchianus
ENSCPBG00000016132	POP4	99	55.856	ENSXMAG00000013862	pop4	93	55.405	Xiphophorus_maculatus