EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000016320 (Gene tree)
Gene ID: 101945949
Gene Symbol: TFB1M
Alias: CGI-75|mtTFB
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 56038 bases
Position: chr3:35734617-35790654
Accession: 17037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000022836	RrnaAD	PF00398.20	9.1e-39	1	1
ENSCPBP00000022837	RrnaAD	PF00398.20	9.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000026906	TFB1M-202	2005	-	ENSCPBP00000022837	341 (aa)	XP_008175861	UPI00046C217A
ENSCPBT00000026905	TFB1M-201	1847	-	ENSCPBP00000022836	341 (aa)	XP_008175861	UPI00046C217A

Gene Model

Click here to download ENSCPBG00000016320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016320	TFB1M	99	76.106	ENSG00000029639	TFB1M	97	76.106	Homo_sapiens
ENSCPBG00000016320	TFB1M	96	72.866	ENSAPOG00000015493	tfb1m	92	72.866	Acanthochromis_polyacanthus
ENSCPBG00000016320	TFB1M	99	74.852	ENSAMEG00000012761	TFB1M	97	74.852	Ailuropoda_melanoleuca
ENSCPBG00000016320	TFB1M	96	72.948	ENSACIG00000014290	tfb1m	93	72.948	Amphilophus_citrinellus
ENSCPBG00000016320	TFB1M	96	74.085	ENSAOCG00000004027	tfb1m	92	74.085	Amphiprion_ocellaris
ENSCPBG00000016320	TFB1M	96	74.390	ENSAPEG00000020359	tfb1m	92	74.390	Amphiprion_percula
ENSCPBG00000016320	TFB1M	96	73.171	ENSATEG00000006826	tfb1m	93	73.171	Anabas_testudineus
ENSCPBG00000016320	TFB1M	52	30.000	ENSAPLG00000009464	DIMT1	61	30.000	Anas_platyrhynchos
ENSCPBG00000016320	TFB1M	99	80.882	ENSAPLG00000006328	TFB1M	98	80.882	Anas_platyrhynchos
ENSCPBG00000016320	TFB1M	51	30.682	ENSACAG00000008504	DIMT1	58	30.682	Anolis_carolinensis
ENSCPBG00000016320	TFB1M	99	79.351	ENSACAG00000005244	TFB1M	98	79.351	Anolis_carolinensis
ENSCPBG00000016320	TFB1M	95	79.257	ENSANAG00000021469	TFB1M	98	76.540	Aotus_nancymaae
ENSCPBG00000016320	TFB1M	96	74.390	ENSACLG00000018734	tfb1m	91	74.390	Astatotilapia_calliptera
ENSCPBG00000016320	TFB1M	96	73.252	ENSAMXG00000036128	tfb1m	90	73.252	Astyanax_mexicanus
ENSCPBG00000016320	TFB1M	95	77.231	ENSBTAG00000031895	TFB1M	96	81.019	Bos_taurus
ENSCPBG00000016320	TFB1M	58	30.198	WBGene00008455	E02H1.1	57	30.198	Caenorhabditis_elegans
ENSCPBG00000016320	TFB1M	96	42.985	WBGene00020189	tfbm-1	91	42.985	Caenorhabditis_elegans
ENSCPBG00000016320	TFB1M	96	78.419	ENSCJAG00000012540	TFB1M	96	78.419	Callithrix_jacchus
ENSCPBG00000016320	TFB1M	95	78.395	ENSCAFG00000000581	TFB1M	94	78.395	Canis_familiaris
ENSCPBG00000016320	TFB1M	95	78.395	ENSCAFG00020015224	TFB1M	94	78.395	Canis_lupus_dingo
ENSCPBG00000016320	TFB1M	96	77.064	ENSCHIG00000017013	TFB1M	98	77.064	Capra_hircus
ENSCPBG00000016320	TFB1M	95	77.160	ENSTSYG00000012298	TFB1M	94	77.160	Carlito_syrichta
ENSCPBG00000016320	TFB1M	69	58.298	ENSCAPG00000013843	TFB1M	78	58.298	Cavia_aperea
ENSCPBG00000016320	TFB1M	100	74.487	ENSCPOG00000030422	TFB1M	97	74.487	Cavia_porcellus
ENSCPBG00000016320	TFB1M	99	77.581	ENSCCAG00000015250	TFB1M	96	77.581	Cebus_capucinus
ENSCPBG00000016320	TFB1M	96	54.711	ENSCATG00000009009	TFB1M	94	54.407	Cercocebus_atys
ENSCPBG00000016320	TFB1M	99	76.696	ENSCLAG00000004500	TFB1M	97	76.696	Chinchilla_lanigera
ENSCPBG00000016320	TFB1M	93	78.549	ENSCSAG00000013259	TFB1M	95	77.812	Chlorocebus_sabaeus
ENSCPBG00000016320	TFB1M	51	30.682	ENSCHOG00000007922	DIMT1	51	30.114	Choloepus_hoffmanni
ENSCPBG00000016320	TFB1M	99	74.852	ENSCHOG00000011245	TFB1M	97	74.852	Choloepus_hoffmanni
ENSCPBG00000016320	TFB1M	90	45.603	ENSCING00000003901	-	80	45.603	Ciona_intestinalis
ENSCPBG00000016320	TFB1M	98	44.023	ENSCSAVG00000004721	-	89	44.023	Ciona_savignyi
ENSCPBG00000016320	TFB1M	96	78.723	ENSCANG00000029768	TFB1M	98	78.723	Colobus_angolensis_palliatus
ENSCPBG00000016320	TFB1M	99	74.706	ENSCGRG00001022866	Tfb1m	98	74.706	Cricetulus_griseus_chok1gshd
ENSCPBG00000016320	TFB1M	97	74.924	ENSCGRG00000018084	Tfb1m	99	74.924	Cricetulus_griseus_crigri
ENSCPBG00000016320	TFB1M	96	71.646	ENSCSEG00000000131	tfb1m	93	71.646	Cynoglossus_semilaevis
ENSCPBG00000016320	TFB1M	94	72.897	ENSCVAG00000009201	tfb1m	91	72.897	Cyprinodon_variegatus
ENSCPBG00000016320	TFB1M	99	68.824	ENSDARG00000040727	tfb1m	96	75.581	Danio_rerio
ENSCPBG00000016320	TFB1M	95	76.524	ENSDNOG00000015984	-	91	76.524	Dasypus_novemcinctus
ENSCPBG00000016320	TFB1M	84	63.415	ENSDNOG00000032672	-	99	63.415	Dasypus_novemcinctus
ENSCPBG00000016320	TFB1M	95	78.086	ENSDORG00000012938	Tfb1m	98	76.036	Dipodomys_ordii
ENSCPBG00000016320	TFB1M	93	49.062	FBgn0261381	mtTFB1	95	49.062	Drosophila_melanogaster
ENSCPBG00000016320	TFB1M	95	54.769	ENSETEG00000005709	TFB1M	93	54.769	Echinops_telfairi
ENSCPBG00000016320	TFB1M	94	54.859	ENSEBUG00000010530	tfb1m	94	53.659	Eptatretus_burgeri
ENSCPBG00000016320	TFB1M	98	76.716	ENSEASG00005018887	TFB1M	96	76.716	Equus_asinus_asinus
ENSCPBG00000016320	TFB1M	98	77.313	ENSECAG00000020997	TFB1M	96	77.313	Equus_caballus
ENSCPBG00000016320	TFB1M	94	77.640	ENSEEUG00000014899	TFB1M	96	77.640	Erinaceus_europaeus
ENSCPBG00000016320	TFB1M	100	72.141	ENSELUG00000002752	tfb1m	87	72.141	Esox_lucius
ENSCPBG00000016320	TFB1M	95	78.395	ENSFCAG00000038785	TFB1M	94	78.395	Felis_catus
ENSCPBG00000016320	TFB1M	100	78.886	ENSFALG00000012500	TFB1M	98	78.886	Ficedula_albicollis
ENSCPBG00000016320	TFB1M	61	31.579	ENSFALG00000011081	DIMT1	61	31.579	Ficedula_albicollis
ENSCPBG00000016320	TFB1M	94	77.812	ENSFDAG00000016985	TFB1M	99	75.294	Fukomys_damarensis
ENSCPBG00000016320	TFB1M	96	71.429	ENSFHEG00000008407	tfb1m	93	71.429	Fundulus_heteroclitus
ENSCPBG00000016320	TFB1M	97	73.939	ENSGMOG00000018738	tfb1m	95	73.939	Gadus_morhua
ENSCPBG00000016320	TFB1M	99	81.818	ENSGALG00000013647	TFB1M	98	81.924	Gallus_gallus
ENSCPBG00000016320	TFB1M	95	71.827	ENSGAFG00000017997	tfb1m	92	71.827	Gambusia_affinis
ENSCPBG00000016320	TFB1M	96	73.780	ENSGACG00000006884	tfb1m	93	73.780	Gasterosteus_aculeatus
ENSCPBG00000016320	TFB1M	99	96.154	ENSGAGG00000025345	TFB1M	98	96.154	Gopherus_agassizii
ENSCPBG00000016320	TFB1M	99	76.106	ENSGGOG00000012189	TFB1M	97	76.106	Gorilla_gorilla
ENSCPBG00000016320	TFB1M	96	74.085	ENSHBUG00000019396	tfb1m	91	74.085	Haplochromis_burtoni
ENSCPBG00000016320	TFB1M	96	77.812	ENSHGLG00000002028	TFB1M	95	77.812	Heterocephalus_glaber_female
ENSCPBG00000016320	TFB1M	96	77.812	ENSHGLG00100001412	TFB1M	95	77.812	Heterocephalus_glaber_male
ENSCPBG00000016320	TFB1M	98	69.369	ENSHCOG00000014135	tfb1m	95	69.369	Hippocampus_comes
ENSCPBG00000016320	TFB1M	95	73.457	ENSIPUG00000010964	tfb1m	95	73.457	Ictalurus_punctatus
ENSCPBG00000016320	TFB1M	99	76.331	ENSSTOG00000026264	TFB1M	97	76.331	Ictidomys_tridecemlineatus
ENSCPBG00000016320	TFB1M	95	78.395	ENSJJAG00000022171	Tfb1m	92	78.395	Jaculus_jaculus
ENSCPBG00000016320	TFB1M	96	69.419	ENSKMAG00000012667	tfb1m	94	69.419	Kryptolebias_marmoratus
ENSCPBG00000016320	TFB1M	96	70.821	ENSLBEG00000011505	tfb1m	92	70.821	Labrus_bergylta
ENSCPBG00000016320	TFB1M	98	77.612	ENSLACG00000012594	TFB1M	95	77.612	Latimeria_chalumnae
ENSCPBG00000016320	TFB1M	96	70.393	ENSLOCG00000016850	tfb1m	95	70.393	Lepisosteus_oculatus
ENSCPBG00000016320	TFB1M	94	78.125	ENSLAFG00000014035	-	97	76.347	Loxodonta_africana
ENSCPBG00000016320	TFB1M	93	62.658	ENSLAFG00000032309	-	98	62.658	Loxodonta_africana
ENSCPBG00000016320	TFB1M	96	78.116	ENSMFAG00000031968	TFB1M	95	78.116	Macaca_fascicularis
ENSCPBG00000016320	TFB1M	96	78.116	ENSMMUG00000011171	TFB1M	95	78.116	Macaca_mulatta
ENSCPBG00000016320	TFB1M	96	78.419	ENSMNEG00000042278	TFB1M	95	78.419	Macaca_nemestrina
ENSCPBG00000016320	TFB1M	96	78.116	ENSMLEG00000000044	TFB1M	95	78.116	Mandrillus_leucophaeus
ENSCPBG00000016320	TFB1M	59	30.049	ENSMAMG00000012872	dimt1l	58	30.049	Mastacembelus_armatus
ENSCPBG00000016320	TFB1M	96	72.256	ENSMAMG00000009423	tfb1m	93	72.256	Mastacembelus_armatus
ENSCPBG00000016320	TFB1M	96	74.390	ENSMZEG00005005640	tfb1m	87	74.390	Maylandia_zebra
ENSCPBG00000016320	TFB1M	75	89.062	ENSMGAG00000012779	TFB1M	97	89.147	Meleagris_gallopavo
ENSCPBG00000016320	TFB1M	61	30.332	ENSMGAG00000004307	DIMT1	58	30.332	Meleagris_gallopavo
ENSCPBG00000016320	TFB1M	99	75.811	ENSMAUG00000006705	Tfb1m	97	75.811	Mesocricetus_auratus
ENSCPBG00000016320	TFB1M	95	79.012	ENSMICG00000045849	TFB1M	94	79.012	Microcebus_murinus
ENSCPBG00000016320	TFB1M	94	78.125	ENSMOCG00000013879	Tfb1m	94	78.462	Microtus_ochrogaster
ENSCPBG00000016320	TFB1M	96	72.948	ENSMMOG00000002203	tfb1m	92	72.948	Mola_mola
ENSCPBG00000016320	TFB1M	94	82.188	ENSMODG00000008169	TFB1M	98	80.357	Monodelphis_domestica
ENSCPBG00000016320	TFB1M	96	71.429	ENSMALG00000011657	tfb1m	87	71.429	Monopterus_albus
ENSCPBG00000016320	TFB1M	99	75.148	MGP_CAROLIEiJ_G0021018	Tfb1m	97	75.148	Mus_caroli
ENSCPBG00000016320	TFB1M	95	77.778	ENSMUSG00000036983	Tfb1m	94	77.778	Mus_musculus
ENSCPBG00000016320	TFB1M	94	78.125	MGP_PahariEiJ_G0023336	Tfb1m	96	77.576	Mus_pahari
ENSCPBG00000016320	TFB1M	95	77.778	MGP_SPRETEiJ_G0021923	Tfb1m	94	77.778	Mus_spretus
ENSCPBG00000016320	TFB1M	95	79.012	ENSMPUG00000002073	TFB1M	94	79.012	Mustela_putorius_furo
ENSCPBG00000016320	TFB1M	95	77.846	ENSMLUG00000011329	TFB1M	94	77.846	Myotis_lucifugus
ENSCPBG00000016320	TFB1M	99	76.401	ENSNGAG00000015154	Tfb1m	93	76.401	Nannospalax_galili
ENSCPBG00000016320	TFB1M	96	74.085	ENSNBRG00000009004	tfb1m	92	74.085	Neolamprologus_brichardi
ENSCPBG00000016320	TFB1M	99	76.522	ENSNLEG00000034352	TFB1M	98	76.522	Nomascus_leucogenys
ENSCPBG00000016320	TFB1M	95	67.593	ENSMEUG00000001699	-	93	67.593	Notamacropus_eugenii
ENSCPBG00000016320	TFB1M	97	60.303	ENSOPRG00000008921	TFB1M	97	60.303	Ochotona_princeps
ENSCPBG00000016320	TFB1M	95	77.709	ENSODEG00000005915	TFB1M	94	77.709	Octodon_degus
ENSCPBG00000016320	TFB1M	96	74.390	ENSONIG00000008109	tfb1m	95	74.390	Oreochromis_niloticus
ENSCPBG00000016320	TFB1M	95	77.778	ENSOCUG00000012154	TFB1M	95	77.778	Oryctolagus_cuniculus
ENSCPBG00000016320	TFB1M	95	73.765	ENSORLG00000017328	tfb1m	79	73.765	Oryzias_latipes
ENSCPBG00000016320	TFB1M	95	74.074	ENSORLG00020002250	tfb1m	94	74.074	Oryzias_latipes_hni
ENSCPBG00000016320	TFB1M	97	73.333	ENSORLG00015016067	tfb1m	95	73.333	Oryzias_latipes_hsok
ENSCPBG00000016320	TFB1M	95	74.691	ENSOMEG00000015641	tfb1m	92	74.691	Oryzias_melastigma
ENSCPBG00000016320	TFB1M	99	73.077	ENSOGAG00000011681	TFB1M	98	73.077	Otolemur_garnettii
ENSCPBG00000016320	TFB1M	96	75.375	ENSOARG00000004216	TFB1M	98	75.375	Ovis_aries
ENSCPBG00000016320	TFB1M	99	76.106	ENSPPAG00000030834	TFB1M	97	76.106	Pan_paniscus
ENSCPBG00000016320	TFB1M	95	78.086	ENSPPRG00000013578	TFB1M	94	78.086	Panthera_pardus
ENSCPBG00000016320	TFB1M	95	78.086	ENSPTIG00000003540	TFB1M	94	78.086	Panthera_tigris_altaica
ENSCPBG00000016320	TFB1M	99	75.811	ENSPTRG00000018730	TFB1M	97	75.811	Pan_troglodytes
ENSCPBG00000016320	TFB1M	96	79.027	ENSPANG00000007489	TFB1M	95	79.027	Papio_anubis
ENSCPBG00000016320	TFB1M	59	30.542	ENSPKIG00000017870	dimt1l	58	30.542	Paramormyrops_kingsleyae
ENSCPBG00000016320	TFB1M	99	71.137	ENSPKIG00000021117	tfb1m	97	71.137	Paramormyrops_kingsleyae
ENSCPBG00000016320	TFB1M	95	94.427	ENSPSIG00000006643	TFB1M	95	94.427	Pelodiscus_sinensis
ENSCPBG00000016320	TFB1M	98	71.471	ENSPMGG00000011289	tfb1m	96	71.471	Periophthalmus_magnuspinnatus
ENSCPBG00000016320	TFB1M	100	75.073	ENSPEMG00000010410	Tfb1m	94	77.846	Peromyscus_maniculatus_bairdii
ENSCPBG00000016320	TFB1M	57	62.944	ENSPMAG00000008056	tfb1m	97	59.633	Petromyzon_marinus
ENSCPBG00000016320	TFB1M	95	82.099	ENSPCIG00000001010	TFB1M	91	82.099	Phascolarctos_cinereus
ENSCPBG00000016320	TFB1M	95	71.385	ENSPFOG00000005139	tfb1m	92	71.385	Poecilia_formosa
ENSCPBG00000016320	TFB1M	95	71.827	ENSPLAG00000021410	tfb1m	92	71.827	Poecilia_latipinna
ENSCPBG00000016320	TFB1M	95	71.207	ENSPMEG00000020166	tfb1m	92	71.207	Poecilia_mexicana
ENSCPBG00000016320	TFB1M	95	71.517	ENSPREG00000022392	tfb1m	92	71.517	Poecilia_reticulata
ENSCPBG00000016320	TFB1M	99	73.529	ENSPPYG00000017123	TFB1M	97	73.529	Pongo_abelii
ENSCPBG00000016320	TFB1M	89	61.921	ENSPCAG00000007078	TFB1M	100	61.921	Procavia_capensis
ENSCPBG00000016320	TFB1M	95	79.012	ENSPCOG00000028453	TFB1M	94	79.012	Propithecus_coquereli
ENSCPBG00000016320	TFB1M	95	78.704	ENSPVAG00000015818	TFB1M	94	78.704	Pteropus_vampyrus
ENSCPBG00000016320	TFB1M	96	74.085	ENSPNYG00000007330	tfb1m	91	74.085	Pundamilia_nyererei
ENSCPBG00000016320	TFB1M	96	72.644	ENSPNAG00000007507	tfb1m	93	72.644	Pygocentrus_nattereri
ENSCPBG00000016320	TFB1M	99	76.627	ENSRNOG00000056223	Tfb1m	97	76.627	Rattus_norvegicus
ENSCPBG00000016320	TFB1M	96	78.419	ENSRBIG00000039975	TFB1M	98	78.419	Rhinopithecus_bieti
ENSCPBG00000016320	TFB1M	96	78.116	ENSRROG00000033802	TFB1M	98	78.116	Rhinopithecus_roxellana
ENSCPBG00000016320	TFB1M	99	76.991	ENSSBOG00000008663	TFB1M	96	76.991	Saimiri_boliviensis_boliviensis
ENSCPBG00000016320	TFB1M	89	78.146	ENSSHAG00000013259	TFB1M	87	78.146	Sarcophilus_harrisii
ENSCPBG00000016320	TFB1M	99	71.471	ENSSFOG00015009739	tfb1m	97	71.471	Scleropages_formosus
ENSCPBG00000016320	TFB1M	96	73.252	ENSSMAG00000008229	tfb1m	93	73.252	Scophthalmus_maximus
ENSCPBG00000016320	TFB1M	98	71.765	ENSSDUG00000011871	tfb1m	95	71.765	Seriola_dumerili
ENSCPBG00000016320	TFB1M	95	74.303	ENSSLDG00000023923	tfb1m	90	74.303	Seriola_lalandi_dorsalis
ENSCPBG00000016320	TFB1M	63	79.630	ENSSARG00000003159	TFB1M	97	79.630	Sorex_araneus
ENSCPBG00000016320	TFB1M	99	79.882	ENSSPUG00000015253	TFB1M	98	79.882	Sphenodon_punctatus
ENSCPBG00000016320	TFB1M	96	72.256	ENSSPAG00000019515	tfb1m	92	72.256	Stegastes_partitus
ENSCPBG00000016320	TFB1M	97	75.904	ENSSSCG00000024361	TFB1M	98	75.904	Sus_scrofa
ENSCPBG00000016320	TFB1M	99	78.529	ENSTGUG00000011136	TFB1M	98	78.529	Taeniopygia_guttata
ENSCPBG00000016320	TFB1M	61	30.332	ENSTGUG00000002749	DIMT1	64	30.332	Taeniopygia_guttata
ENSCPBG00000016320	TFB1M	97	71.818	ENSTRUG00000020334	tfb1m	93	71.818	Takifugu_rubripes
ENSCPBG00000016320	TFB1M	63	75.234	ENSTNIG00000016882	tfb1m	95	75.234	Tetraodon_nigroviridis
ENSCPBG00000016320	TFB1M	95	76.543	ENSTBEG00000008769	TFB1M	98	73.607	Tupaia_belangeri
ENSCPBG00000016320	TFB1M	94	78.571	ENSTTRG00000006327	TFB1M	96	78.571	Tursiops_truncatus
ENSCPBG00000016320	TFB1M	94	76.875	ENSUAMG00000017802	TFB1M	96	74.556	Ursus_americanus
ENSCPBG00000016320	TFB1M	99	74.556	ENSUMAG00000013377	TFB1M	88	74.556	Ursus_maritimus
ENSCPBG00000016320	TFB1M	95	77.231	ENSVPAG00000010148	TFB1M	96	77.231	Vicugna_pacos
ENSCPBG00000016320	TFB1M	95	78.395	ENSVVUG00000007643	TFB1M	95	78.395	Vulpes_vulpes
ENSCPBG00000016320	TFB1M	100	75.367	ENSXETG00000007852	tfb1m	98	75.367	Xenopus_tropicalis
ENSCPBG00000016320	TFB1M	95	71.827	ENSXCOG00000013230	tfb1m	92	71.827	Xiphophorus_couchianus
ENSCPBG00000016320	TFB1M	95	71.827	ENSXMAG00000019222	tfb1m	92	71.827	Xiphophorus_maculatus