EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000016330 (Gene tree)
Gene ID: 103307186
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 140926 bases
Position: chr3:36082035-36222960
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000022855	RRM_1	PF00076.22	2.1e-09	1	1
ENSCPBP00000022851	RRM_1	PF00076.22	2.4e-09	1	1
ENSCPBP00000022847	RRM_1	PF00076.22	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000026918	SCAF8-201	5545	XM_008177623	ENSCPBP00000022847	1371 (aa)	XP_008175842	UPI00046C2F62
ENSCPBT00000026926	SCAF8-203	5497	-	ENSCPBP00000022855	1355 (aa)	-	-
ENSCPBT00000026922	SCAF8-202	5506	-	ENSCPBP00000022851	1358 (aa)	XP_008175851	UPI00046C18B5

Gene Model

Click here to download ENSCPBG00000016330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016330's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016330	SCAF8	100	82.166	ENSG00000213079	SCAF8	100	75.382	Homo_sapiens
ENSCPBG00000016330	SCAF8	81	70.952	ENSAPOG00000015527	SCAF8	77	70.828	Acanthochromis_polyacanthus
ENSCPBG00000016330	SCAF8	100	74.656	ENSAMEG00000007583	SCAF8	97	75.235	Ailuropoda_melanoleuca
ENSCPBG00000016330	SCAF8	81	71.323	ENSAOCG00000002421	SCAF8	76	71.199	Amphiprion_ocellaris
ENSCPBG00000016330	SCAF8	82	67.531	ENSATEG00000006959	SCAF8	97	67.985	Anabas_testudineus
ENSCPBG00000016330	SCAF8	99	75.481	ENSACAG00000005282	SCAF8	99	76.815	Anolis_carolinensis
ENSCPBG00000016330	SCAF8	100	82.495	ENSANAG00000036184	SCAF8	100	74.654	Aotus_nancymaae
ENSCPBG00000016330	SCAF8	80	71.040	ENSACLG00000018828	SCAF8	80	63.789	Astatotilapia_calliptera
ENSCPBG00000016330	SCAF8	100	82.713	ENSBTAG00000031917	SCAF8	100	76.103	Bos_taurus
ENSCPBG00000016330	SCAF8	100	82.166	ENSCJAG00000012631	SCAF8	97	74.149	Callithrix_jacchus
ENSCPBG00000016330	SCAF8	99	75.740	ENSCAFG00000000570	SCAF8	99	76.701	Canis_familiaris
ENSCPBG00000016330	SCAF8	99	75.740	ENSCAFG00020015048	SCAF8	98	76.701	Canis_lupus_dingo
ENSCPBG00000016330	SCAF8	100	82.604	ENSCHIG00000025041	SCAF8	100	76.176	Capra_hircus
ENSCPBG00000016330	SCAF8	100	81.510	ENSTSYG00000010991	SCAF8	98	74.044	Carlito_syrichta
ENSCPBG00000016330	SCAF8	60	88.793	ENSCAPG00000003300	SCAF8	85	88.596	Cavia_aperea
ENSCPBG00000016330	SCAF8	100	60.712	ENSCPOG00000030311	-	66	60.465	Cavia_porcellus
ENSCPBG00000016330	SCAF8	99	64.459	ENSCPOG00000022216	-	99	68.145	Cavia_porcellus
ENSCPBG00000016330	SCAF8	100	80.065	ENSCCAG00000024952	SCAF8	100	75.221	Cebus_capucinus
ENSCPBG00000016330	SCAF8	100	82.166	ENSCATG00000035361	SCAF8	100	75.164	Cercocebus_atys
ENSCPBG00000016330	SCAF8	100	80.535	ENSCSAG00000013430	SCAF8	100	74.175	Chlorocebus_sabaeus
ENSCPBG00000016330	SCAF8	100	81.947	ENSCANG00000039499	SCAF8	99	74.908	Colobus_angolensis_palliatus
ENSCPBG00000016330	SCAF8	100	73.843	ENSCGRG00001020167	Scaf8	100	73.843	Cricetulus_griseus_chok1gshd
ENSCPBG00000016330	SCAF8	99	73.669	ENSCGRG00000004120	Scaf8	99	73.669	Cricetulus_griseus_crigri
ENSCPBG00000016330	SCAF8	81	68.317	ENSCSEG00000000043	-	78	69.963	Cynoglossus_semilaevis
ENSCPBG00000016330	SCAF8	82	67.895	ENSCVAG00000000925	SCAF8	77	67.763	Cyprinodon_variegatus
ENSCPBG00000016330	SCAF8	96	72.067	ENSDNOG00000025271	SCAF8	100	75.153	Dasypus_novemcinctus
ENSCPBG00000016330	SCAF8	99	72.206	ENSDORG00000006391	Scaf8	100	73.577	Dipodomys_ordii
ENSCPBG00000016330	SCAF8	100	75.074	ENSEASG00005018879	SCAF8	100	75.221	Equus_asinus_asinus
ENSCPBG00000016330	SCAF8	100	75.147	ENSECAG00000005540	SCAF8	100	76.397	Equus_caballus
ENSCPBG00000016330	SCAF8	79	68.911	ENSELUG00000002779	SCAF8	75	68.826	Esox_lucius
ENSCPBG00000016330	SCAF8	100	75.956	ENSFCAG00000023424	SCAF8	100	76.471	Felis_catus
ENSCPBG00000016330	SCAF8	81	69.619	ENSFHEG00000008284	SCAF8	77	69.619	Fundulus_heteroclitus
ENSCPBG00000016330	SCAF8	58	68.655	ENSGMOG00000018812	SCAF8	68	70.558	Gadus_morhua
ENSCPBG00000016330	SCAF8	99	83.346	ENSGALG00000013635	SCAF8	98	85.630	Gallus_gallus
ENSCPBG00000016330	SCAF8	78	70.026	ENSGACG00000006909	SCAF8	93	72.326	Gasterosteus_aculeatus
ENSCPBG00000016330	SCAF8	65	86.343	ENSGAGG00000017820	-	88	89.729	Gopherus_agassizii
ENSCPBG00000016330	SCAF8	100	82.166	ENSGGOG00000008645	SCAF8	100	75.382	Gorilla_gorilla
ENSCPBG00000016330	SCAF8	80	70.916	ENSHBUG00000019537	SCAF8	80	63.684	Haplochromis_burtoni
ENSCPBG00000016330	SCAF8	99	74.451	ENSSTOG00000026043	SCAF8	99	75.831	Ictidomys_tridecemlineatus
ENSCPBG00000016330	SCAF8	99	79.935	ENSJJAG00000020480	Scaf8	99	73.871	Jaculus_jaculus
ENSCPBG00000016330	SCAF8	81	69.678	ENSKMAG00000012767	SCAF8	78	69.678	Kryptolebias_marmoratus
ENSCPBG00000016330	SCAF8	60	77.037	ENSLBEG00000012484	-	63	77.143	Labrus_bergylta
ENSCPBG00000016330	SCAF8	81	76.736	ENSLACG00000001394	SCAF8	100	77.189	Latimeria_chalumnae
ENSCPBG00000016330	SCAF8	87	74.125	ENSLOCG00000016856	SCAF8	96	73.625	Lepisosteus_oculatus
ENSCPBG00000016330	SCAF8	100	70.833	ENSLAFG00000000022	SCAF8	100	73.407	Loxodonta_africana
ENSCPBG00000016330	SCAF8	100	82.385	ENSMFAG00000032738	SCAF8	100	75.310	Macaca_fascicularis
ENSCPBG00000016330	SCAF8	100	82.385	ENSMMUG00000015163	SCAF8	100	75.310	Macaca_mulatta
ENSCPBG00000016330	SCAF8	100	82.385	ENSMNEG00000043466	SCAF8	100	75.310	Macaca_nemestrina
ENSCPBG00000016330	SCAF8	99	82.080	ENSMLEG00000034845	SCAF8	99	75.055	Mandrillus_leucophaeus
ENSCPBG00000016330	SCAF8	77	67.979	ENSMAMG00000009457	SCAF8	76	67.454	Mastacembelus_armatus
ENSCPBG00000016330	SCAF8	80	71.040	ENSMZEG00005005698	SCAF8	80	63.789	Maylandia_zebra
ENSCPBG00000016330	SCAF8	99	84.338	ENSMGAG00000012762	SCAF8	100	84.779	Meleagris_gallopavo
ENSCPBG00000016330	SCAF8	99	72.835	ENSMAUG00000009513	Scaf8	100	72.539	Mesocricetus_auratus
ENSCPBG00000016330	SCAF8	100	73.843	ENSMOCG00000014950	Scaf8	100	73.843	Microtus_ochrogaster
ENSCPBG00000016330	SCAF8	79	65.539	ENSMMOG00000002216	SCAF8	78	65.322	Mola_mola
ENSCPBG00000016330	SCAF8	81	70.654	ENSMALG00000011584	SCAF8	78	70.530	Monopterus_albus
ENSCPBG00000016330	SCAF8	100	72.469	MGP_CAROLIEiJ_G0021016	Scaf8	100	73.529	Mus_caroli
ENSCPBG00000016330	SCAF8	100	72.251	ENSMUSG00000046201	Scaf8	100	73.529	Mus_musculus
ENSCPBG00000016330	SCAF8	100	73.235	MGP_PahariEiJ_G0023334	Scaf8	100	73.824	Mus_pahari
ENSCPBG00000016330	SCAF8	100	74.149	ENSMPUG00000001974	SCAF8	100	74.873	Mustela_putorius_furo
ENSCPBG00000016330	SCAF8	100	81.291	ENSMLUG00000029190	SCAF8	100	73.416	Myotis_lucifugus
ENSCPBG00000016330	SCAF8	100	73.622	ENSNGAG00000012332	Scaf8	100	74.284	Nannospalax_galili
ENSCPBG00000016330	SCAF8	87	66.341	ENSNBRG00000009067	SCAF8	100	59.651	Neolamprologus_brichardi
ENSCPBG00000016330	SCAF8	100	80.698	ENSNLEG00000015509	SCAF8	99	74.305	Nomascus_leucogenys
ENSCPBG00000016330	SCAF8	72	83.505	ENSOPRG00000018413	-	77	83.505	Ochotona_princeps
ENSCPBG00000016330	SCAF8	85	73.664	ENSONIG00000008119	SCAF8	99	60.606	Oreochromis_niloticus
ENSCPBG00000016330	SCAF8	99	75.092	ENSOCUG00000026063	SCAF8	99	76.127	Oryctolagus_cuniculus
ENSCPBG00000016330	SCAF8	81	69.278	ENSORLG00000017358	SCAF8	78	70.087	Oryzias_latipes
ENSCPBG00000016330	SCAF8	81	69.278	ENSORLG00020002214	SCAF8	78	69.592	Oryzias_latipes_hni
ENSCPBG00000016330	SCAF8	81	69.400	ENSORLG00015015779	SCAF8	78	70.210	Oryzias_latipes_hsok
ENSCPBG00000016330	SCAF8	81	69.523	ENSOMEG00000015471	SCAF8	77	70.334	Oryzias_melastigma
ENSCPBG00000016330	SCAF8	100	71.736	ENSOGAG00000034223	SCAF8	97	73.458	Otolemur_garnettii
ENSCPBG00000016330	SCAF8	99	82.541	ENSOARG00000004159	SCAF8	100	76.018	Ovis_aries
ENSCPBG00000016330	SCAF8	99	80.241	ENSPPAG00000039826	SCAF8	100	76.029	Pan_paniscus
ENSCPBG00000016330	SCAF8	100	75.809	ENSPPRG00000023175	SCAF8	100	76.324	Panthera_pardus
ENSCPBG00000016330	SCAF8	99	75.666	ENSPTIG00000014836	SCAF8	100	76.183	Panthera_tigris_altaica
ENSCPBG00000016330	SCAF8	100	82.057	ENSPTRG00000018727	SCAF8	100	75.310	Pan_troglodytes
ENSCPBG00000016330	SCAF8	100	82.166	ENSPANG00000017489	SCAF8	100	74.153	Papio_anubis
ENSCPBG00000016330	SCAF8	91	69.116	ENSPKIG00000021212	SCAF8	100	69.116	Paramormyrops_kingsleyae
ENSCPBG00000016330	SCAF8	91	89.562	ENSPSIG00000008614	SCAF8	99	91.851	Pelodiscus_sinensis
ENSCPBG00000016330	SCAF8	99	72.874	ENSPEMG00000010531	Scaf8	100	73.501	Peromyscus_maniculatus_bairdii
ENSCPBG00000016330	SCAF8	100	78.750	ENSPCIG00000001141	SCAF8	100	79.265	Phascolarctos_cinereus
ENSCPBG00000016330	SCAF8	78	73.012	ENSPFOG00000004176	SCAF8	90	72.881	Poecilia_formosa
ENSCPBG00000016330	SCAF8	78	72.881	ENSPLAG00000021432	SCAF8	75	72.751	Poecilia_latipinna
ENSCPBG00000016330	SCAF8	78	72.881	ENSPMEG00000007591	SCAF8	84	69.082	Poecilia_mexicana
ENSCPBG00000016330	SCAF8	81	69.716	ENSPREG00000000652	SCAF8	75	72.490	Poecilia_reticulata
ENSCPBG00000016330	SCAF8	100	81.311	ENSPPYG00000017121	SCAF8	100	74.236	Pongo_abelii
ENSCPBG00000016330	SCAF8	86	92.977	ENSPCAG00000013044	SCAF8	90	93.144	Procavia_capensis
ENSCPBG00000016330	SCAF8	100	75.533	ENSPCOG00000002067	SCAF8	99	75.722	Propithecus_coquereli
ENSCPBG00000016330	SCAF8	99	81.838	ENSPVAG00000005582	SCAF8	100	71.227	Pteropus_vampyrus
ENSCPBG00000016330	SCAF8	80	71.040	ENSPNYG00000007277	SCAF8	80	63.789	Pundamilia_nyererei
ENSCPBG00000016330	SCAF8	81	69.307	ENSPNAG00000024740	SCAF8	82	70.173	Pygocentrus_nattereri
ENSCPBG00000016330	SCAF8	100	73.529	ENSRNOG00000016919	Scaf8	100	74.118	Rattus_norvegicus
ENSCPBG00000016330	SCAF8	100	82.166	ENSRBIG00000035769	SCAF8	100	75.091	Rhinopithecus_bieti
ENSCPBG00000016330	SCAF8	100	82.166	ENSRROG00000013580	SCAF8	100	75.091	Rhinopithecus_roxellana
ENSCPBG00000016330	SCAF8	100	82.385	ENSSBOG00000027023	SCAF8	100	75.164	Saimiri_boliviensis_boliviensis
ENSCPBG00000016330	SCAF8	100	77.517	ENSSHAG00000009915	SCAF8	100	78.986	Sarcophilus_harrisii
ENSCPBG00000016330	SCAF8	85	69.610	ENSSFOG00015009481	SCAF8	86	70.789	Scleropages_formosus
ENSCPBG00000016330	SCAF8	80	70.654	ENSSMAG00000008275	SCAF8	77	70.407	Scophthalmus_maximus
ENSCPBG00000016330	SCAF8	100	86.672	ENSSPUG00000015219	SCAF8	98	94.760	Sphenodon_punctatus
ENSCPBG00000016330	SCAF8	100	76.324	ENSSSCG00000004070	SCAF8	97	89.730	Sus_scrofa
ENSCPBG00000016330	SCAF8	99	83.259	ENSTGUG00000011151	SCAF8	100	84.136	Taeniopygia_guttata
ENSCPBG00000016330	SCAF8	81	68.480	ENSTRUG00000009243	SCAF8	78	68.480	Takifugu_rubripes
ENSCPBG00000016330	SCAF8	81	66.870	ENSTNIG00000016885	SCAF8	99	69.571	Tetraodon_nigroviridis
ENSCPBG00000016330	SCAF8	99	75.704	ENSTTRG00000014538	SCAF8	100	75.630	Tursiops_truncatus
ENSCPBG00000016330	SCAF8	100	75.515	ENSUAMG00000024736	SCAF8	99	76.092	Ursus_americanus
ENSCPBG00000016330	SCAF8	98	75.281	ENSUMAG00000013404	SCAF8	100	75.655	Ursus_maritimus
ENSCPBG00000016330	SCAF8	55	86.357	ENSVPAG00000012465	SCAF8	92	90.541	Vicugna_pacos
ENSCPBG00000016330	SCAF8	99	75.592	ENSVVUG00000007532	SCAF8	100	76.404	Vulpes_vulpes
ENSCPBG00000016330	SCAF8	100	55.155	ENSXETG00000013132	scaf8	60	80.211	Xenopus_tropicalis
ENSCPBG00000016330	SCAF8	81	69.592	ENSXMAG00000019192	SCAF8	75	72.360	Xiphophorus_maculatus