EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000016444 (Gene tree)
Gene ID: 101931475
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 12593 bases
Position: chrKK083089.1:1178879-1191471
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000023011	RRM_1	PF00076.22	1.3e-63	1	4
ENSCPBP00000023011	RRM_1	PF00076.22	1.3e-63	2	4
ENSCPBP00000023011	RRM_1	PF00076.22	1.3e-63	3	4
ENSCPBP00000023011	RRM_1	PF00076.22	1.3e-63	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000027108	-	3526	-	ENSCPBP00000023011	672 (aa)	XP_008171936	UPI00046BF042

Gene Model

Click here to download ENSCPBG00000016444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000016444	-	53	31.667	ENSCPBG00000003611	TIA1	73	31.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016444	-	60	40.235	ENSAPOG00000014534	-	67	40.759	Acanthochromis_polyacanthus
ENSCPBG00000016444	-	56	62.105	ENSAPOG00000023888	ncl	66	57.589	Acanthochromis_polyacanthus
ENSCPBG00000016444	-	56	61.436	ENSACIG00000013234	ncl	62	61.376	Amphilophus_citrinellus
ENSCPBG00000016444	-	56	62.368	ENSAOCG00000003133	ncl	89	51.368	Amphiprion_ocellaris
ENSCPBG00000016444	-	59	38.679	ENSAOCG00000014792	-	61	39.695	Amphiprion_ocellaris
ENSCPBG00000016444	-	61	37.788	ENSAPEG00000013612	-	60	39.440	Amphiprion_percula
ENSCPBG00000016444	-	56	62.368	ENSAPEG00000002769	ncl	89	51.142	Amphiprion_percula
ENSCPBG00000016444	-	72	40.509	ENSATEG00000019862	-	75	45.013	Anabas_testudineus
ENSCPBG00000016444	-	56	62.105	ENSATEG00000013343	ncl	65	56.879	Anabas_testudineus
ENSCPBG00000016444	-	83	71.125	ENSAPLG00000012897	-	97	65.954	Anas_platyrhynchos
ENSCPBG00000016444	-	94	62.406	ENSACAG00000001006	-	90	61.782	Anolis_carolinensis
ENSCPBG00000016444	-	55	64.935	ENSACLG00000026031	ncl	85	65.049	Astatotilapia_calliptera
ENSCPBG00000016444	-	56	60.477	ENSAMXG00000001647	ncl	81	62.092	Astyanax_mexicanus
ENSCPBG00000016444	-	53	47.945	ENSCHIG00000012665	-	64	47.788	Capra_hircus
ENSCPBG00000016444	-	56	60.677	ENSCSEG00000015089	ncl	57	60.779	Cynoglossus_semilaevis
ENSCPBG00000016444	-	56	61.702	ENSCVAG00000012600	ncl	61	60.046	Cyprinodon_variegatus
ENSCPBG00000016444	-	51	65.287	ENSDARG00000002710	ncl	81	65.714	Danio_rerio
ENSCPBG00000016444	-	64	50.000	ENSDNOG00000040257	-	71	49.206	Dasypus_novemcinctus
ENSCPBG00000016444	-	57	47.692	ENSELUG00000022826	-	81	48.052	Esox_lucius
ENSCPBG00000016444	-	57	75.389	ENSFALG00000007592	-	91	65.197	Ficedula_albicollis
ENSCPBG00000016444	-	52	60.745	ENSFHEG00000018000	ncl	66	55.778	Fundulus_heteroclitus
ENSCPBG00000016444	-	57	58.247	ENSGMOG00000001341	ncl	60	57.592	Gadus_morhua
ENSCPBG00000016444	-	57	79.221	ENSGALG00000032930	NCL	92	69.134	Gallus_gallus
ENSCPBG00000016444	-	56	62.005	ENSGAFG00000015375	ncl	50	62.105	Gambusia_affinis
ENSCPBG00000016444	-	56	57.632	ENSGACG00000008970	ncl	64	56.125	Gasterosteus_aculeatus
ENSCPBG00000016444	-	91	90.865	ENSGAGG00000013330	-	90	91.354	Gopherus_agassizii
ENSCPBG00000016444	-	56	62.797	ENSHBUG00000006869	ncl	89	52.535	Haplochromis_burtoni
ENSCPBG00000016444	-	56	61.478	ENSKMAG00000008111	ncl	54	62.730	Kryptolebias_marmoratus
ENSCPBG00000016444	-	67	61.008	ENSLBEG00000019073	ncl	67	56.785	Labrus_bergylta
ENSCPBG00000016444	-	60	40.000	ENSLBEG00000007915	-	64	41.316	Labrus_bergylta
ENSCPBG00000016444	-	54	40.633	ENSLBEG00000014278	-	82	41.240	Labrus_bergylta
ENSCPBG00000016444	-	58	52.273	ENSLACG00000022167	-	80	52.865	Latimeria_chalumnae
ENSCPBG00000016444	-	57	67.008	ENSLACG00000009328	ncl	63	61.400	Latimeria_chalumnae
ENSCPBG00000016444	-	54	62.912	ENSLOCG00000004828	ncl	58	61.086	Lepisosteus_oculatus
ENSCPBG00000016444	-	63	37.528	ENSMAMG00000003479	-	70	38.250	Mastacembelus_armatus
ENSCPBG00000016444	-	56	62.797	ENSMZEG00005017438	ncl	89	51.314	Maylandia_zebra
ENSCPBG00000016444	-	61	81.661	ENSMGAG00000008147	-	100	81.250	Meleagris_gallopavo
ENSCPBG00000016444	-	90	58.234	ENSMODG00000002470	-	91	58.595	Monodelphis_domestica
ENSCPBG00000016444	-	58	57.068	ENSMALG00000014827	ncl	51	60.393	Monopterus_albus
ENSCPBG00000016444	-	61	60.000	ENSMPUG00000001663	-	58	50.000	Mustela_putorius_furo
ENSCPBG00000016444	-	57	37.795	ENSONIG00000010631	-	96	37.931	Oreochromis_niloticus
ENSCPBG00000016444	-	56	62.797	ENSONIG00000012508	ncl	89	49.849	Oreochromis_niloticus
ENSCPBG00000016444	-	53	61.111	ENSORLG00000007055	ncl	63	56.379	Oryzias_latipes
ENSCPBG00000016444	-	60	32.243	ENSORLG00000004645	-	84	32.506	Oryzias_latipes
ENSCPBG00000016444	-	55	60.811	ENSORLG00020017943	ncl	63	56.379	Oryzias_latipes_hni
ENSCPBG00000016444	-	56	33.924	ENSORLG00020003497	-	73	34.392	Oryzias_latipes_hni
ENSCPBG00000016444	-	57	33.995	ENSORLG00015006613	-	75	34.921	Oryzias_latipes_hsok
ENSCPBG00000016444	-	55	60.218	ENSORLG00015013815	ncl	87	64.630	Oryzias_latipes_hsok
ENSCPBG00000016444	-	56	33.676	ENSOMEG00000015864	-	79	33.962	Oryzias_melastigma
ENSCPBG00000016444	-	56	60.686	ENSOMEG00000020786	ncl	50	60.789	Oryzias_melastigma
ENSCPBG00000016444	-	56	63.089	ENSPKIG00000002604	ncl	53	63.089	Paramormyrops_kingsleyae
ENSCPBG00000016444	-	90	78.604	ENSPSIG00000002361	-	92	78.756	Pelodiscus_sinensis
ENSCPBG00000016444	-	56	68.542	ENSPCIG00000003293	-	63	65.870	Phascolarctos_cinereus
ENSCPBG00000016444	-	56	62.005	ENSPFOG00000024205	ncl	51	62.368	Poecilia_formosa
ENSCPBG00000016444	-	56	62.005	ENSPLAG00000024026	ncl	51	62.368	Poecilia_latipinna
ENSCPBG00000016444	-	56	62.005	ENSPMEG00000006000	ncl	51	62.368	Poecilia_mexicana
ENSCPBG00000016444	-	56	62.797	ENSPNYG00000020494	ncl	89	52.000	Pundamilia_nyererei
ENSCPBG00000016444	-	60	61.687	ENSSHAG00000002702	-	71	60.171	Sarcophilus_harrisii
ENSCPBG00000016444	-	59	64.773	ENSSHAG00000007489	-	100	53.223	Sarcophilus_harrisii
ENSCPBG00000016444	-	56	65.885	ENSSFOG00015008583	ncl	72	57.294	Scleropages_formosus
ENSCPBG00000016444	-	56	59.432	ENSSMAG00000021241	ncl	54	59.896	Scophthalmus_maximus
ENSCPBG00000016444	-	70	37.302	ENSSMAG00000007582	-	62	41.013	Scophthalmus_maximus
ENSCPBG00000016444	-	56	63.130	ENSSDUG00000006128	ncl	85	63.492	Seriola_dumerili
ENSCPBG00000016444	-	72	37.426	ENSSDUG00000010922	-	71	41.294	Seriola_dumerili
ENSCPBG00000016444	-	56	61.842	ENSSLDG00000002012	ncl	65	57.851	Seriola_lalandi_dorsalis
ENSCPBG00000016444	-	62	39.773	ENSSLDG00000015784	-	65	41.058	Seriola_lalandi_dorsalis
ENSCPBG00000016444	-	90	69.097	ENSSPUG00000008244	-	91	68.621	Sphenodon_punctatus
ENSCPBG00000016444	-	61	41.330	ENSSPAG00000001859	-	62	40.874	Stegastes_partitus
ENSCPBG00000016444	-	65	70.444	ENSTGUG00000009782	-	90	64.372	Taeniopygia_guttata
ENSCPBG00000016444	-	54	59.836	ENSTRUG00000008185	ncl	63	56.849	Takifugu_rubripes
ENSCPBG00000016444	-	57	57.326	ENSTNIG00000012186	ncl	82	50.101	Tetraodon_nigroviridis
ENSCPBG00000016444	-	56	65.803	ENSXETG00000009517	ncl	54	66.839	Xenopus_tropicalis
ENSCPBG00000016444	-	56	45.031	ENSXCOG00000003524	ncl	83	53.074	Xiphophorus_couchianus
ENSCPBG00000016444	-	58	35.309	ENSXCOG00000007369	-	86	36.757	Xiphophorus_couchianus
ENSCPBG00000016444	-	56	63.061	ENSXMAG00000005914	ncl	58	60.179	Xiphophorus_maculatus