EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000016541 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 17546 bases
Position: chrKK082983.1:465731-483276
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000023160	AF-4	PF05110.13	2.1e-232	1	2
ENSCPBP00000023160	AF-4	PF05110.13	2.1e-232	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000027289	-	1869	-	ENSCPBP00000023160	622 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000016541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016541	-	96	91.765	ENSG00000072364	AFF4	53	91.765	Homo_sapiens
ENSCPBG00000016541	-	83	53.414	ENSG00000144218	AFF3	91	53.297	Homo_sapiens
ENSCPBG00000016541	-	90	56.574	ENSG00000155966	AFF2	61	56.574	Homo_sapiens
ENSCPBG00000016541	-	96	92.157	ENSAMEG00000017764	AFF4	52	92.157	Ailuropoda_melanoleuca
ENSCPBG00000016541	-	83	53.226	ENSAMEG00000013204	-	60	53.226	Ailuropoda_melanoleuca
ENSCPBG00000016541	-	87	69.818	ENSACIG00000010525	aff4	77	69.818	Amphilophus_citrinellus
ENSCPBG00000016541	-	87	84.706	ENSATEG00000010963	aff4	51	84.706	Anabas_testudineus
ENSCPBG00000016541	-	88	56.078	ENSAPLG00000003660	-	65	58.431	Anas_platyrhynchos
ENSCPBG00000016541	-	96	94.961	ENSAPLG00000011166	AFF4	52	94.961	Anas_platyrhynchos
ENSCPBG00000016541	-	97	93.600	ENSACAG00000022605	AFF4	52	91.765	Anolis_carolinensis
ENSCPBG00000016541	-	98	91.765	ENSANAG00000037761	AFF4	53	91.765	Aotus_nancymaae
ENSCPBG00000016541	-	90	56.574	ENSANAG00000023509	AFF2	61	56.574	Aotus_nancymaae
ENSCPBG00000016541	-	83	53.226	ENSANAG00000030084	AFF3	60	53.659	Aotus_nancymaae
ENSCPBG00000016541	-	93	40.781	ENSAMXG00000000387	aff2	59	42.278	Astyanax_mexicanus
ENSCPBG00000016541	-	96	92.157	ENSBTAG00000009482	AFF4	52	92.157	Bos_taurus
ENSCPBG00000016541	-	90	56.574	ENSCJAG00000000061	AFF2	64	56.574	Callithrix_jacchus
ENSCPBG00000016541	-	96	91.765	ENSCJAG00000013322	AFF4	53	91.765	Callithrix_jacchus
ENSCPBG00000016541	-	96	92.549	ENSCAFG00000000930	AFF4	54	92.549	Canis_familiaris
ENSCPBG00000016541	-	95	90.040	ENSCAFG00020000956	AFF4	55	88.672	Canis_lupus_dingo
ENSCPBG00000016541	-	96	93.600	ENSCHIG00000015153	AFF4	54	92.157	Capra_hircus
ENSCPBG00000016541	-	88	52.692	ENSCHIG00000017897	AFF2	63	52.692	Capra_hircus
ENSCPBG00000016541	-	86	52.846	ENSTSYG00000029683	AFF3	54	52.610	Carlito_syrichta
ENSCPBG00000016541	-	88	56.175	ENSTSYG00000000526	AFF2	63	56.175	Carlito_syrichta
ENSCPBG00000016541	-	96	91.373	ENSTSYG00000014713	AFF4	52	91.373	Carlito_syrichta
ENSCPBG00000016541	-	96	80.403	ENSCAPG00000013980	AFF4	53	81.556	Cavia_aperea
ENSCPBG00000016541	-	96	92.800	ENSCPOG00000001814	AFF4	53	91.373	Cavia_porcellus
ENSCPBG00000016541	-	90	56.574	ENSCCAG00000025994	AFF2	61	56.574	Cebus_capucinus
ENSCPBG00000016541	-	96	91.765	ENSCCAG00000030353	AFF4	52	91.765	Cebus_capucinus
ENSCPBG00000016541	-	83	53.414	ENSCCAG00000023489	AFF3	69	53.659	Cebus_capucinus
ENSCPBG00000016541	-	90	56.574	ENSCATG00000040342	AFF2	63	56.574	Cercocebus_atys
ENSCPBG00000016541	-	96	91.765	ENSCATG00000044510	AFF4	53	91.765	Cercocebus_atys
ENSCPBG00000016541	-	96	92.800	ENSCLAG00000013850	AFF4	52	91.373	Chinchilla_lanigera
ENSCPBG00000016541	-	96	91.765	ENSCSAG00000013682	AFF4	53	91.765	Chlorocebus_sabaeus
ENSCPBG00000016541	-	83	54.065	ENSCSAG00000017193	AFF3	62	53.815	Chlorocebus_sabaeus
ENSCPBG00000016541	-	83	53.659	ENSCANG00000035188	AFF3	59	53.414	Colobus_angolensis_palliatus
ENSCPBG00000016541	-	96	91.765	ENSCANG00000030350	AFF4	53	91.765	Colobus_angolensis_palliatus
ENSCPBG00000016541	-	90	56.574	ENSCANG00000029116	AFF2	64	56.574	Colobus_angolensis_palliatus
ENSCPBG00000016541	-	98	90.196	ENSCGRG00001016680	Aff4	53	90.196	Cricetulus_griseus_chok1gshd
ENSCPBG00000016541	-	85	45.679	ENSCGRG00000004837	Aff1	67	47.541	Cricetulus_griseus_crigri
ENSCPBG00000016541	-	98	90.196	ENSCGRG00000008529	Aff4	53	90.196	Cricetulus_griseus_crigri
ENSCPBG00000016541	-	66	41.364	ENSCVAG00000011467	aff2	59	43.764	Cyprinodon_variegatus
ENSCPBG00000016541	-	96	93.600	ENSDNOG00000016669	AFF4	53	92.157	Dasypus_novemcinctus
ENSCPBG00000016541	-	82	54.032	ENSDNOG00000047861	-	67	54.032	Dasypus_novemcinctus
ENSCPBG00000016541	-	85	44.033	ENSDNOG00000048783	-	64	46.721	Dasypus_novemcinctus
ENSCPBG00000016541	-	96	92.000	ENSEASG00005018361	AFF4	54	90.588	Equus_asinus_asinus
ENSCPBG00000016541	-	83	53.226	ENSEASG00005018275	AFF3	52	53.226	Equus_asinus_asinus
ENSCPBG00000016541	-	83	53.226	ENSECAG00000006249	AFF3	50	53.226	Equus_caballus
ENSCPBG00000016541	-	96	92.000	ENSECAG00000011969	AFF4	54	90.588	Equus_caballus
ENSCPBG00000016541	-	92	84.000	ENSELUG00000023871	aff4	50	86.400	Esox_lucius
ENSCPBG00000016541	-	96	94.400	ENSFCAG00000012425	AFF4	52	92.941	Felis_catus
ENSCPBG00000016541	-	96	93.725	ENSFALG00000008916	AFF4	51	93.725	Ficedula_albicollis
ENSCPBG00000016541	-	96	92.800	ENSFDAG00000005342	AFF4	53	91.373	Fukomys_damarensis
ENSCPBG00000016541	-	80	50.410	ENSGALG00000016767	AFF3	52	45.367	Gallus_gallus
ENSCPBG00000016541	-	96	94.902	ENSGALG00000030147	AFF4	54	94.902	Gallus_gallus
ENSCPBG00000016541	-	97	83.594	ENSGACG00000020734	aff4	52	83.984	Gasterosteus_aculeatus
ENSCPBG00000016541	-	96	98.841	ENSGAGG00000020214	AFF4	51	98.841	Gopherus_agassizii
ENSCPBG00000016541	-	82	51.230	ENSGAGG00000024801	-	65	53.846	Gopherus_agassizii
ENSCPBG00000016541	-	88	57.143	ENSGAGG00000016287	-	71	60.081	Gopherus_agassizii
ENSCPBG00000016541	-	96	91.765	ENSGGOG00000011786	AFF4	77	86.479	Gorilla_gorilla
ENSCPBG00000016541	-	90	56.574	ENSGGOG00000010543	AFF2	61	56.574	Gorilla_gorilla
ENSCPBG00000016541	-	96	92.800	ENSHGLG00000006661	AFF4	54	91.373	Heterocephalus_glaber_female
ENSCPBG00000016541	-	86	52.823	ENSHGLG00000005004	-	56	52.823	Heterocephalus_glaber_female
ENSCPBG00000016541	-	84	56.574	ENSHGLG00100010140	AFF2	65	56.574	Heterocephalus_glaber_male
ENSCPBG00000016541	-	96	92.800	ENSHGLG00100018576	AFF4	57	91.373	Heterocephalus_glaber_male
ENSCPBG00000016541	-	98	79.775	ENSHCOG00000016280	aff4	51	84.000	Hippocampus_comes
ENSCPBG00000016541	-	90	58.077	ENSIPUG00000014592	aff2	51	58.077	Ictalurus_punctatus
ENSCPBG00000016541	-	96	91.373	ENSSTOG00000026695	AFF4	52	91.373	Ictidomys_tridecemlineatus
ENSCPBG00000016541	-	96	92.000	ENSJJAG00000000912	Aff4	52	90.588	Jaculus_jaculus
ENSCPBG00000016541	-	97	83.922	ENSKMAG00000010443	aff4	52	85.098	Kryptolebias_marmoratus
ENSCPBG00000016541	-	93	83.922	ENSLBEG00000017778	aff4	51	83.922	Labrus_bergylta
ENSCPBG00000016541	-	98	86.692	ENSLACG00000008849	AFF4	53	86.090	Latimeria_chalumnae
ENSCPBG00000016541	-	86	51.210	ENSLACG00000009317	-	71	54.800	Latimeria_chalumnae
ENSCPBG00000016541	-	93	55.197	ENSLACG00000010860	aff2	70	55.197	Latimeria_chalumnae
ENSCPBG00000016541	-	95	84.800	ENSLOCG00000010610	aff4	50	86.667	Lepisosteus_oculatus
ENSCPBG00000016541	-	90	56.574	ENSLAFG00000018691	AFF2	88	48.993	Loxodonta_africana
ENSCPBG00000016541	-	96	93.200	ENSLAFG00000010555	AFF4	53	91.765	Loxodonta_africana
ENSCPBG00000016541	-	96	91.765	ENSMFAG00000034615	AFF4	53	91.765	Macaca_fascicularis
ENSCPBG00000016541	-	90	56.574	ENSMFAG00000044807	AFF2	62	56.574	Macaca_fascicularis
ENSCPBG00000016541	-	83	53.414	ENSMMUG00000022836	-	58	53.414	Macaca_mulatta
ENSCPBG00000016541	-	90	56.574	ENSMMUG00000000466	AFF2	62	56.574	Macaca_mulatta
ENSCPBG00000016541	-	96	91.765	ENSMMUG00000015640	AFF4	72	87.451	Macaca_mulatta
ENSCPBG00000016541	-	90	56.574	ENSMNEG00000035909	AFF2	61	56.574	Macaca_nemestrina
ENSCPBG00000016541	-	96	91.765	ENSMNEG00000033381	AFF4	53	91.765	Macaca_nemestrina
ENSCPBG00000016541	-	90	56.574	ENSMLEG00000038832	AFF2	63	56.574	Mandrillus_leucophaeus
ENSCPBG00000016541	-	96	88.986	ENSMLEG00000028953	AFF4	53	87.059	Mandrillus_leucophaeus
ENSCPBG00000016541	-	87	53.659	ENSMLEG00000041792	AFF3	60	53.659	Mandrillus_leucophaeus
ENSCPBG00000016541	-	96	94.574	ENSMGAG00000009144	AFF4	53	94.574	Meleagris_gallopavo
ENSCPBG00000016541	-	90	57.661	ENSMGAG00000008246	-	75	59.839	Meleagris_gallopavo
ENSCPBG00000016541	-	97	91.200	ENSMAUG00000013669	Aff4	64	91.200	Mesocricetus_auratus
ENSCPBG00000016541	-	96	92.400	ENSMICG00000002753	-	56	90.980	Microcebus_murinus
ENSCPBG00000016541	-	98	90.588	ENSMOCG00000003884	Aff4	53	90.588	Microtus_ochrogaster
ENSCPBG00000016541	-	83	53.386	ENSMOCG00000005082	-	58	53.386	Microtus_ochrogaster
ENSCPBG00000016541	-	92	85.772	ENSMMOG00000013763	aff4	53	85.772	Mola_mola
ENSCPBG00000016541	-	96	94.400	ENSMODG00000013842	AFF4	51	92.941	Monodelphis_domestica
ENSCPBG00000016541	-	97	92.000	MGP_CAROLIEiJ_G0016331	Aff4	53	90.588	Mus_caroli
ENSCPBG00000016541	-	97	92.000	ENSMUSG00000049470	Aff4	53	90.588	Mus_musculus
ENSCPBG00000016541	-	98	90.196	MGP_PahariEiJ_G0017466	Aff4	53	90.196	Mus_pahari
ENSCPBG00000016541	-	84	41.803	MGP_SPRETEiJ_G0028466	Aff1	84	31.235	Mus_spretus
ENSCPBG00000016541	-	97	92.000	MGP_SPRETEiJ_G0017175	Aff4	53	90.588	Mus_spretus
ENSCPBG00000016541	-	96	88.150	ENSMPUG00000010316	AFF4	53	85.955	Mustela_putorius_furo
ENSCPBG00000016541	-	96	94.000	ENSMLUG00000015081	AFF4	52	92.549	Myotis_lucifugus
ENSCPBG00000016541	-	56	53.629	ENSMLUG00000015255	AFF3	66	54.065	Myotis_lucifugus
ENSCPBG00000016541	-	96	92.400	ENSNGAG00000019867	Aff4	52	90.980	Nannospalax_galili
ENSCPBG00000016541	-	83	51.220	ENSNGAG00000002408	Aff3	55	54.472	Nannospalax_galili
ENSCPBG00000016541	-	90	62.807	ENSNBRG00000006303	aff4	99	62.807	Neolamprologus_brichardi
ENSCPBG00000016541	-	90	56.574	ENSNLEG00000013346	AFF2	62	56.574	Nomascus_leucogenys
ENSCPBG00000016541	-	96	91.765	ENSNLEG00000012874	AFF4	53	91.765	Nomascus_leucogenys
ENSCPBG00000016541	-	96	92.400	ENSODEG00000008137	AFF4	52	90.980	Octodon_degus
ENSCPBG00000016541	-	94	84.314	ENSONIG00000008446	aff4	51	84.314	Oreochromis_niloticus
ENSCPBG00000016541	-	88	51.417	ENSOANG00000004623	-	79	52.800	Ornithorhynchus_anatinus
ENSCPBG00000016541	-	84	57.430	ENSOANG00000001095	-	61	60.000	Ornithorhynchus_anatinus
ENSCPBG00000016541	-	96	92.400	ENSOCUG00000013635	AFF4	52	90.980	Oryctolagus_cuniculus
ENSCPBG00000016541	-	97	83.137	ENSORLG00000001361	aff4	52	83.137	Oryzias_latipes
ENSCPBG00000016541	-	97	83.529	ENSORLG00020020601	aff4	52	83.529	Oryzias_latipes_hni
ENSCPBG00000016541	-	97	83.529	ENSORLG00015004684	aff4	52	83.529	Oryzias_latipes_hsok
ENSCPBG00000016541	-	97	83.922	ENSOMEG00000005078	aff4	52	83.922	Oryzias_melastigma
ENSCPBG00000016541	-	96	92.800	ENSOGAG00000028482	AFF4	52	91.373	Otolemur_garnettii
ENSCPBG00000016541	-	86	40.598	ENSOGAG00000031211	-	65	42.083	Otolemur_garnettii
ENSCPBG00000016541	-	96	93.600	ENSOARG00000013406	AFF4	53	92.157	Ovis_aries
ENSCPBG00000016541	-	96	91.765	ENSPPAG00000043255	AFF4	75	87.451	Pan_paniscus
ENSCPBG00000016541	-	96	92.941	ENSPPRG00000016213	AFF4	52	92.941	Panthera_pardus
ENSCPBG00000016541	-	96	92.941	ENSPTIG00000016209	AFF4	52	92.941	Panthera_tigris_altaica
ENSCPBG00000016541	-	81	53.226	ENSPTIG00000018781	AFF3	59	53.226	Panthera_tigris_altaica
ENSCPBG00000016541	-	90	56.400	ENSPTIG00000018890	AFF2	62	56.175	Panthera_tigris_altaica
ENSCPBG00000016541	-	96	91.765	ENSPTRG00000046486	-	75	87.451	Pan_troglodytes
ENSCPBG00000016541	-	83	45.902	ENSPTRG00000016255	AFF1	54	45.492	Pan_troglodytes
ENSCPBG00000016541	-	96	91.765	ENSPTRG00000017228	AFF4	75	87.451	Pan_troglodytes
ENSCPBG00000016541	-	90	56.574	ENSPTRG00000022353	AFF2	61	56.574	Pan_troglodytes
ENSCPBG00000016541	-	90	56.574	ENSPANG00000002926	AFF2	64	56.574	Papio_anubis
ENSCPBG00000016541	-	96	91.765	ENSPANG00000007039	AFF4	53	91.765	Papio_anubis
ENSCPBG00000016541	-	88	55.242	ENSPSIG00000010309	AFF2	74	57.831	Pelodiscus_sinensis
ENSCPBG00000016541	-	96	96.471	ENSPSIG00000013003	AFF4	50	96.471	Pelodiscus_sinensis
ENSCPBG00000016541	-	84	46.825	ENSPMGG00000003738	AFF2	53	48.438	Periophthalmus_magnuspinnatus
ENSCPBG00000016541	-	88	84.739	ENSPMGG00000006477	aff4	81	78.339	Periophthalmus_magnuspinnatus
ENSCPBG00000016541	-	98	90.588	ENSPEMG00000007995	Aff4	53	90.588	Peromyscus_maniculatus_bairdii
ENSCPBG00000016541	-	73	56.175	ENSPEMG00000019376	Aff2	50	56.175	Peromyscus_maniculatus_bairdii
ENSCPBG00000016541	-	96	92.549	ENSPCIG00000000197	AFF4	51	92.549	Phascolarctos_cinereus
ENSCPBG00000016541	-	54	52.846	ENSPCIG00000013816	AFF3	65	54.032	Phascolarctos_cinereus
ENSCPBG00000016541	-	84	50.584	ENSPFOG00000004524	aff2	64	53.307	Poecilia_formosa
ENSCPBG00000016541	-	96	91.765	ENSPPYG00000015775	AFF4	53	91.765	Pongo_abelii
ENSCPBG00000016541	-	81	53.226	ENSPPYG00000012096	AFF3	50	53.414	Pongo_abelii
ENSCPBG00000016541	-	96	88.672	ENSPCAG00000003995	AFF4	53	88.672	Procavia_capensis
ENSCPBG00000016541	-	89	56.574	ENSPCOG00000013963	AFF2	61	56.574	Propithecus_coquereli
ENSCPBG00000016541	-	96	91.200	ENSPCOG00000023876	AFF4	78	89.804	Propithecus_coquereli
ENSCPBG00000016541	-	96	90.625	ENSPVAG00000015204	AFF4	53	91.797	Pteropus_vampyrus
ENSCPBG00000016541	-	92	57.312	ENSPNAG00000005945	aff2	50	60.079	Pygocentrus_nattereri
ENSCPBG00000016541	-	97	90.588	ENSRNOG00000006965	Aff4	52	90.588	Rattus_norvegicus
ENSCPBG00000016541	-	90	56.574	ENSRBIG00000035160	AFF2	66	56.574	Rhinopithecus_bieti
ENSCPBG00000016541	-	96	91.765	ENSRBIG00000029376	AFF4	54	91.765	Rhinopithecus_bieti
ENSCPBG00000016541	-	90	56.574	ENSRROG00000044189	AFF2	65	56.574	Rhinopithecus_roxellana
ENSCPBG00000016541	-	96	91.765	ENSRROG00000033812	AFF4	80	87.059	Rhinopithecus_roxellana
ENSCPBG00000016541	-	88	56.574	ENSSBOG00000020604	AFF2	60	56.574	Saimiri_boliviensis_boliviensis
ENSCPBG00000016541	-	96	91.765	ENSSBOG00000021562	AFF4	53	91.765	Saimiri_boliviensis_boliviensis
ENSCPBG00000016541	-	83	54.251	ENSSHAG00000009556	AFF2	66	55.466	Sarcophilus_harrisii
ENSCPBG00000016541	-	96	93.725	ENSSHAG00000013198	AFF4	53	93.725	Sarcophilus_harrisii
ENSCPBG00000016541	-	92	41.089	ENSSFOG00015009105	-	55	40.962	Scleropages_formosus
ENSCPBG00000016541	-	97	84.800	ENSSFOG00015018646	aff4	52	87.600	Scleropages_formosus
ENSCPBG00000016541	-	89	84.000	ENSSFOG00015000846	AFF4	74	84.739	Scleropages_formosus
ENSCPBG00000016541	-	93	84.314	ENSSMAG00000004734	aff4	50	84.706	Scophthalmus_maximus
ENSCPBG00000016541	-	93	84.314	ENSSDUG00000019498	aff4	51	84.314	Seriola_dumerili
ENSCPBG00000016541	-	93	84.314	ENSSLDG00000007683	aff4	53	84.314	Seriola_lalandi_dorsalis
ENSCPBG00000016541	-	78	47.598	ENSSPUG00000009604	AFF3	66	50.655	Sphenodon_punctatus
ENSCPBG00000016541	-	97	94.118	ENSSPUG00000012215	AFF4	53	94.118	Sphenodon_punctatus
ENSCPBG00000016541	-	86	85.098	ENSSPAG00000012370	aff4	69	85.098	Stegastes_partitus
ENSCPBG00000016541	-	96	93.600	ENSSSCG00000014291	AFF4	53	92.157	Sus_scrofa
ENSCPBG00000016541	-	83	45.267	ENSSSCG00000023593	AFF1	59	37.960	Sus_scrofa
ENSCPBG00000016541	-	75	43.750	ENSTGUG00000010075	-	80	44.937	Taeniopygia_guttata
ENSCPBG00000016541	-	96	93.725	ENSTGUG00000000187	AFF4	52	93.725	Taeniopygia_guttata
ENSCPBG00000016541	-	94	84.706	ENSTRUG00000008087	aff4	50	84.706	Takifugu_rubripes
ENSCPBG00000016541	-	93	84.314	ENSTNIG00000018201	aff4	51	84.314	Tetraodon_nigroviridis
ENSCPBG00000016541	-	96	91.765	ENSTTRG00000014729	AFF4	52	91.765	Tursiops_truncatus
ENSCPBG00000016541	-	96	92.549	ENSUAMG00000025984	AFF4	52	92.549	Ursus_americanus
ENSCPBG00000016541	-	95	89.600	ENSUMAG00000017952	AFF4	54	88.235	Ursus_maritimus
ENSCPBG00000016541	-	83	53.414	ENSUMAG00000007823	-	57	53.659	Ursus_maritimus
ENSCPBG00000016541	-	96	89.412	ENSVPAG00000007247	AFF4	53	89.412	Vicugna_pacos
ENSCPBG00000016541	-	96	92.549	ENSVVUG00000024524	AFF4	54	92.549	Vulpes_vulpes
ENSCPBG00000016541	-	100	88.000	ENSXETG00000004169	aff4	55	86.667	Xenopus_tropicalis
ENSCPBG00000016541	-	87	47.490	ENSXETG00000030016	AFF3	98	50.607	Xenopus_tropicalis
ENSCPBG00000016541	-	76	52.564	ENSXCOG00000013338	aff2	63	32.171	Xiphophorus_couchianus
ENSCPBG00000016541	-	69	76.190	ENSXCOG00000006385	aff4	82	76.190	Xiphophorus_couchianus