EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCPBG00000016547 (Gene tree)
Gene ID
101950211
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Chrysemys_picta_bellii
Status
putative
Strand
Minus strand
Length
48036 bases
Position
chrKK082996.1:609612-657647
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPBP00000023165CSDPF00313.225.3e-8515
ENSCPBP00000023165CSDPF00313.225.3e-8525
ENSCPBP00000023165CSDPF00313.225.3e-8535
ENSCPBP00000023165CSDPF00313.225.3e-8545
ENSCPBP00000023165CSDPF00313.225.3e-8555
ENSCPBP00000023162CSDPF00313.226.1e-8515
ENSCPBP00000023162CSDPF00313.226.1e-8525
ENSCPBP00000023162CSDPF00313.226.1e-8535
ENSCPBP00000023162CSDPF00313.226.1e-8545
ENSCPBP00000023162CSDPF00313.226.1e-8555
ENSCPBP00000023167CSDPF00313.223.1e-8415
ENSCPBP00000023167CSDPF00313.223.1e-8425
ENSCPBP00000023167CSDPF00313.223.1e-8435
ENSCPBP00000023167CSDPF00313.223.1e-8445
ENSCPBP00000023167CSDPF00313.223.1e-8455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPBT00000027295CSDE1-2023860-ENSCPBP00000023165765 (aa)--
ENSCPBT00000027297CSDE1-2033590-ENSCPBP00000023167893 (aa)--
ENSCPBT00000027291CSDE1-2013953XM_005294930ENSCPBP00000023162796 (aa)XP_005294987UPI000388DE5C
Gene Model
Click here to download ENSCPBG00000016547's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016547's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPBG00000016547CSDE110092.607ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCPBG00000016547CSDE110079.974ENSAPOG00000015538csde110079.974Acanthochromis_polyacanthus
ENSCPBG00000016547CSDE110091.395ENSAMEG00000017129CSDE19491.395Ailuropoda_melanoleuca
ENSCPBG00000016547CSDE18780.270ENSACIG00000015175csde110080.270Amphilophus_citrinellus
ENSCPBG00000016547CSDE110080.104ENSAOCG00000011510csde110080.104Amphiprion_ocellaris
ENSCPBG00000016547CSDE110080.104ENSAPEG00000007194csde110080.104Amphiprion_percula
ENSCPBG00000016547CSDE110079.481ENSATEG00000003864csde110079.481Anabas_testudineus
ENSCPBG00000016547CSDE110095.686ENSAPLG00000008797CSDE110095.686Anas_platyrhynchos
ENSCPBG00000016547CSDE110096.231ENSACAG00000003120CSDE110096.231Anolis_carolinensis
ENSCPBG00000016547CSDE110092.607ENSANAG00000024665CSDE19592.607Aotus_nancymaae
ENSCPBG00000016547CSDE19370.922ENSANAG00000028396-9171.769Aotus_nancymaae
ENSCPBG00000016547CSDE110079.194ENSACLG00000013296csde110079.584Astatotilapia_calliptera
ENSCPBG00000016547CSDE110078.599ENSAMXG00000007436csde110078.599Astyanax_mexicanus
ENSCPBG00000016547CSDE110092.231ENSBTAG00000000678CSDE110091.917Bos_taurus
ENSCPBG00000016547CSDE110092.732ENSCJAG00000012565CSDE19592.732Callithrix_jacchus
ENSCPBG00000016547CSDE19892.144ENSCAFG00000009618CSDE19492.144Canis_familiaris
ENSCPBG00000016547CSDE110092.177ENSCAFG00020000481CSDE110092.177Canis_lupus_dingo
ENSCPBG00000016547CSDE110092.356ENSCHIG00000017250CSDE110092.047Capra_hircus
ENSCPBG00000016547CSDE110092.607ENSTSYG00000003747CSDE110092.607Carlito_syrichta
ENSCPBG00000016547CSDE110094.479ENSCAPG00000015128CSDE110094.479Cavia_aperea
ENSCPBG00000016547CSDE110087.218ENSCPOG00000040388CSDE110087.218Cavia_porcellus
ENSCPBG00000016547CSDE110092.732ENSCCAG00000036794CSDE110092.732Cebus_capucinus
ENSCPBG00000016547CSDE19765.924ENSCCAG00000030878-9165.996Cebus_capucinus
ENSCPBG00000016547CSDE19567.327ENSCCAG00000033677-9967.221Cebus_capucinus
ENSCPBG00000016547CSDE110092.607ENSCATG00000036962CSDE19792.308Cercocebus_atys
ENSCPBG00000016547CSDE110092.356ENSCLAG00000006618CSDE110092.356Chinchilla_lanigera
ENSCPBG00000016547CSDE110092.607ENSCSAG00000001658CSDE19592.607Chlorocebus_sabaeus
ENSCPBG00000016547CSDE110097.087ENSCHOG00000000918CSDE18597.087Choloepus_hoffmanni
ENSCPBG00000016547CSDE19743.067ENSCING00000014465-9643.067Ciona_intestinalis
ENSCPBG00000016547CSDE19642.821ENSCSAVG00000008100-9842.821Ciona_savignyi
ENSCPBG00000016547CSDE110092.607ENSCANG00000035096CSDE19792.308Colobus_angolensis_palliatus
ENSCPBG00000016547CSDE19985.820ENSCANG00000031069-9492.937Colobus_angolensis_palliatus
ENSCPBG00000016547CSDE110075.750ENSCGRG00001014011-10075.750Cricetulus_griseus_chok1gshd
ENSCPBG00000016547CSDE110091.855ENSCGRG00001016833-10091.855Cricetulus_griseus_chok1gshd
ENSCPBG00000016547CSDE110083.043ENSCGRG00000005831-10083.043Cricetulus_griseus_crigri
ENSCPBG00000016547CSDE19788.196ENSCGRG00000002225-10088.196Cricetulus_griseus_crigri
ENSCPBG00000016547CSDE110078.544ENSCSEG00000002620csde110078.544Cynoglossus_semilaevis
ENSCPBG00000016547CSDE110079.221ENSCVAG00000001344csde110079.221Cyprinodon_variegatus
ENSCPBG00000016547CSDE110079.650ENSDARG00000074758csde110079.650Danio_rerio
ENSCPBG00000016547CSDE110092.188ENSDNOG00000010287-9392.188Dasypus_novemcinctus
ENSCPBG00000016547CSDE18173.043ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSCPBG00000016547CSDE110092.105ENSDORG00000011609Csde110092.105Dipodomys_ordii
ENSCPBG00000016547CSDE19748.980FBgn0263352Unr8344.565Drosophila_melanogaster
ENSCPBG00000016547CSDE19972.288ENSETEG00000013678-9972.288Echinops_telfairi
ENSCPBG00000016547CSDE19564.901ENSETEG00000007109-9964.901Echinops_telfairi
ENSCPBG00000016547CSDE19082.567ENSETEG00000006280-9982.567Echinops_telfairi
ENSCPBG00000016547CSDE19995.556ENSETEG00000002491-8095.041Echinops_telfairi
ENSCPBG00000016547CSDE19955.528ENSEBUG00000008647csde19953.810Eptatretus_burgeri
ENSCPBG00000016547CSDE110092.732ENSEASG00005006284CSDE110092.732Equus_asinus_asinus
ENSCPBG00000016547CSDE110092.732ENSECAG00000020885CSDE110092.732Equus_caballus
ENSCPBG00000016547CSDE19295.925ENSEEUG00000006286CSDE17492.147Erinaceus_europaeus
ENSCPBG00000016547CSDE110077.232ENSELUG00000015507csde110077.232Esox_lucius
ENSCPBG00000016547CSDE110092.607ENSFCAG00000029266CSDE110092.308Felis_catus
ENSCPBG00000016547CSDE110095.477ENSFALG00000003407CSDE110095.477Ficedula_albicollis
ENSCPBG00000016547CSDE110092.231ENSFDAG00000007882CSDE110092.231Fukomys_damarensis
ENSCPBG00000016547CSDE110078.901ENSFHEG00000010799csde110078.901Fundulus_heteroclitus
ENSCPBG00000016547CSDE19978.723ENSGMOG00000012731csde110078.723Gadus_morhua
ENSCPBG00000016547CSDE19895.519ENSGALG00000002139CSDE19895.519Gallus_gallus
ENSCPBG00000016547CSDE19279.268ENSGAFG00000005241csde19579.268Gambusia_affinis
ENSCPBG00000016547CSDE19979.250ENSGACG00000004544csde110079.250Gasterosteus_aculeatus
ENSCPBG00000016547CSDE110099.372ENSGAGG00000017685CSDE110099.372Gopherus_agassizii
ENSCPBG00000016547CSDE110092.607ENSGGOG00000002164CSDE110092.308Gorilla_gorilla
ENSCPBG00000016547CSDE110079.194ENSHBUG00000020315csde110079.584Haplochromis_burtoni
ENSCPBG00000016547CSDE19974.404ENSHGLG00000000650-9974.404Heterocephalus_glaber_female
ENSCPBG00000016547CSDE110077.318ENSHGLG00000019549-10077.318Heterocephalus_glaber_female
ENSCPBG00000016547CSDE19979.632ENSHGLG00000007471-9879.632Heterocephalus_glaber_female
ENSCPBG00000016547CSDE110083.333ENSHGLG00000009620-10083.584Heterocephalus_glaber_female
ENSCPBG00000016547CSDE110082.920ENSHGLG00000003829-10082.920Heterocephalus_glaber_female
ENSCPBG00000016547CSDE19679.955ENSHGLG00000010039-10079.955Heterocephalus_glaber_female
ENSCPBG00000016547CSDE19982.229ENSHGLG00000008555-10082.186Heterocephalus_glaber_female
ENSCPBG00000016547CSDE19378.601ENSHGLG00100004195-10078.601Heterocephalus_glaber_male
ENSCPBG00000016547CSDE19679.955ENSHGLG00100006910-10079.955Heterocephalus_glaber_male
ENSCPBG00000016547CSDE19977.530ENSHGLG00100007287-9877.530Heterocephalus_glaber_male
ENSCPBG00000016547CSDE110074.870ENSHGLG00100001846-10074.870Heterocephalus_glaber_male
ENSCPBG00000016547CSDE19773.719ENSHGLG00100004833-10073.719Heterocephalus_glaber_male
ENSCPBG00000016547CSDE110078.357ENSHGLG00100012072-10078.357Heterocephalus_glaber_male
ENSCPBG00000016547CSDE19978.723ENSHGLG00100002245-9978.723Heterocephalus_glaber_male
ENSCPBG00000016547CSDE110092.481ENSHGLG00100019438-10092.481Heterocephalus_glaber_male
ENSCPBG00000016547CSDE110077.633ENSHCOG00000004158csde110077.633Hippocampus_comes
ENSCPBG00000016547CSDE110077.432ENSIPUG00000000355csde110077.432Ictalurus_punctatus
ENSCPBG00000016547CSDE19268.051ENSSTOG00000032722-9969.744Ictidomys_tridecemlineatus
ENSCPBG00000016547CSDE110075.513ENSSTOG00000030994-10075.513Ictidomys_tridecemlineatus
ENSCPBG00000016547CSDE110091.980ENSJJAG00000019571Csde110091.980Jaculus_jaculus
ENSCPBG00000016547CSDE110078.385ENSKMAG00000005685csde110077.998Kryptolebias_marmoratus
ENSCPBG00000016547CSDE110079.740ENSLBEG00000014770csde110079.740Labrus_bergylta
ENSCPBG00000016547CSDE110081.390ENSLACG00000018452CSDE19481.390Latimeria_chalumnae
ENSCPBG00000016547CSDE110081.807ENSLOCG00000010413csde19481.807Lepisosteus_oculatus
ENSCPBG00000016547CSDE110091.656ENSLAFG00000007150CSDE19691.656Loxodonta_africana
ENSCPBG00000016547CSDE110092.607ENSMFAG00000003674CSDE110092.308Macaca_fascicularis
ENSCPBG00000016547CSDE110092.607ENSMMUG00000001974CSDE110092.308Macaca_mulatta
ENSCPBG00000016547CSDE110092.607ENSMNEG00000045247CSDE19792.308Macaca_nemestrina
ENSCPBG00000016547CSDE110092.356ENSMLEG00000038673CSDE19592.356Mandrillus_leucophaeus
ENSCPBG00000016547CSDE110080.364ENSMAMG00000008821csde110080.364Mastacembelus_armatus
ENSCPBG00000016547CSDE110079.194ENSMZEG00005021675csde110079.584Maylandia_zebra
ENSCPBG00000016547CSDE110095.431ENSMGAG00000016381CSDE110095.431Meleagris_gallopavo
ENSCPBG00000016547CSDE110091.855ENSMAUG00000014031Csde110091.855Mesocricetus_auratus
ENSCPBG00000016547CSDE110092.356ENSMICG00000002050CSDE19989.286Microcebus_murinus
ENSCPBG00000016547CSDE110091.855ENSMOCG00000018960Csde110091.855Microtus_ochrogaster
ENSCPBG00000016547CSDE110079.481ENSMMOG00000015075csde110079.481Mola_mola
ENSCPBG00000016547CSDE110093.609ENSMODG00000004685CSDE110093.609Monodelphis_domestica
ENSCPBG00000016547CSDE110079.870ENSMALG00000007132csde110079.870Monopterus_albus
ENSCPBG00000016547CSDE110091.980MGP_CAROLIEiJ_G0025444Csde110094.702Mus_caroli
ENSCPBG00000016547CSDE110091.980ENSMUSG00000068823Csde110094.702Mus_musculus
ENSCPBG00000016547CSDE110091.980MGP_PahariEiJ_G0026888Csde110094.702Mus_pahari
ENSCPBG00000016547CSDE110091.980MGP_SPRETEiJ_G0026394Csde110094.702Mus_spretus
ENSCPBG00000016547CSDE19892.583ENSMPUG00000005753CSDE19992.583Mustela_putorius_furo
ENSCPBG00000016547CSDE110091.786ENSMLUG00000005681CSDE19491.786Myotis_lucifugus
ENSCPBG00000016547CSDE19763.697ENSNGAG00000012599-10063.697Nannospalax_galili
ENSCPBG00000016547CSDE110092.105ENSNGAG00000021929Csde110092.105Nannospalax_galili
ENSCPBG00000016547CSDE110079.194ENSNBRG00000020808csde110079.584Neolamprologus_brichardi
ENSCPBG00000016547CSDE110092.481ENSNLEG00000004842CSDE19792.177Nomascus_leucogenys
ENSCPBG00000016547CSDE19899.029ENSMEUG00000002677CSDE19599.029Notamacropus_eugenii
ENSCPBG00000016547CSDE19897.087ENSOPRG00000005002CSDE17697.087Ochotona_princeps
ENSCPBG00000016547CSDE19761.947ENSODEG00000005979-9861.947Octodon_degus
ENSCPBG00000016547CSDE110091.855ENSODEG00000007383-10091.855Octodon_degus
ENSCPBG00000016547CSDE110077.289ENSONIG00000009309csde110077.289Oreochromis_niloticus
ENSCPBG00000016547CSDE110078.554ENSOANG00000003346-10078.554Ornithorhynchus_anatinus
ENSCPBG00000016547CSDE110092.105ENSOCUG00000016438CSDE19592.105Oryctolagus_cuniculus
ENSCPBG00000016547CSDE110079.688ENSORLG00000000707csde110079.688Oryzias_latipes
ENSCPBG00000016547CSDE110078.849ENSORLG00020005148csde110077.017Oryzias_latipes_hni
ENSCPBG00000016547CSDE110079.427ENSORLG00015019415csde110079.427Oryzias_latipes_hsok
ENSCPBG00000016547CSDE110079.454ENSOMEG00000015656csde110079.454Oryzias_melastigma
ENSCPBG00000016547CSDE110092.699ENSOGAG00000012127CSDE19492.699Otolemur_garnettii
ENSCPBG00000016547CSDE110092.047ENSOARG00000020034CSDE19492.047Ovis_aries
ENSCPBG00000016547CSDE110092.607ENSPPAG00000025861CSDE110092.308Pan_paniscus
ENSCPBG00000016547CSDE110092.607ENSPPRG00000006747CSDE19592.607Panthera_pardus
ENSCPBG00000016547CSDE110092.607ENSPTIG00000015468CSDE110092.607Panthera_tigris_altaica
ENSCPBG00000016547CSDE110092.607ENSPTRG00000033721CSDE110092.607Pan_troglodytes
ENSCPBG00000016547CSDE110092.607ENSPANG00000018873CSDE110092.308Papio_anubis
ENSCPBG00000016547CSDE110078.646ENSPKIG00000009459csde110078.646Paramormyrops_kingsleyae
ENSCPBG00000016547CSDE19699.111ENSPSIG00000003823CSDE19699.111Pelodiscus_sinensis
ENSCPBG00000016547CSDE110078.674ENSPMGG00000000772csde110078.674Periophthalmus_magnuspinnatus
ENSCPBG00000016547CSDE110092.105ENSPEMG00000020357-10092.105Peromyscus_maniculatus_bairdii
ENSCPBG00000016547CSDE110093.860ENSPCIG00000022587CSDE110093.860Phascolarctos_cinereus
ENSCPBG00000016547CSDE19978.120ENSPFOG00000012664csde110078.727Poecilia_formosa
ENSCPBG00000016547CSDE19774.080ENSPLAG00000017680csde19374.080Poecilia_latipinna
ENSCPBG00000016547CSDE19873.748ENSPMEG00000005094csde19673.748Poecilia_mexicana
ENSCPBG00000016547CSDE110078.509ENSPREG00000011631csde110076.351Poecilia_reticulata
ENSCPBG00000016547CSDE110092.481ENSPPYG00000000996CSDE110092.481Pongo_abelii
ENSCPBG00000016547CSDE110098.058ENSPCAG00000014368CSDE19098.058Procavia_capensis
ENSCPBG00000016547CSDE19081.343ENSPCOG00000008223-9081.343Propithecus_coquereli
ENSCPBG00000016547CSDE110092.356ENSPCOG00000017893CSDE110092.356Propithecus_coquereli
ENSCPBG00000016547CSDE110086.310ENSPVAG00000008225CSDE19586.310Pteropus_vampyrus
ENSCPBG00000016547CSDE110079.194ENSPNYG00000013745csde110079.584Pundamilia_nyererei
ENSCPBG00000016547CSDE110078.701ENSPNAG00000001958csde110078.701Pygocentrus_nattereri
ENSCPBG00000016547CSDE110091.855ENSRNOG00000061058Csde110091.855Rattus_norvegicus
ENSCPBG00000016547CSDE110087.109ENSRBIG00000038966-10081.138Rhinopithecus_bieti
ENSCPBG00000016547CSDE110089.223ENSRBIG00000038088-10089.062Rhinopithecus_bieti
ENSCPBG00000016547CSDE110092.607ENSRROG00000043101CSDE19792.308Rhinopithecus_roxellana
ENSCPBG00000016547CSDE110092.732ENSSBOG00000035592CSDE19592.732Saimiri_boliviensis_boliviensis
ENSCPBG00000016547CSDE110093.481ENSSHAG00000009831CSDE110093.481Sarcophilus_harrisii
ENSCPBG00000016547CSDE110079.324ENSSFOG00015007498csde110079.324Scleropages_formosus
ENSCPBG00000016547CSDE110079.844ENSSMAG00000007203csde110079.844Scophthalmus_maximus
ENSCPBG00000016547CSDE110079.844ENSSDUG00000015380csde110079.844Seriola_dumerili
ENSCPBG00000016547CSDE110079.844ENSSLDG00000008819csde110079.844Seriola_lalandi_dorsalis
ENSCPBG00000016547CSDE110092.308ENSSARG00000000738CSDE19492.308Sorex_araneus
ENSCPBG00000016547CSDE110096.608ENSSPUG00000008714CSDE110096.608Sphenodon_punctatus
ENSCPBG00000016547CSDE110080.494ENSSPAG00000000716csde110080.494Stegastes_partitus
ENSCPBG00000016547CSDE110092.607ENSSSCG00000006752CSDE110092.308Sus_scrofa
ENSCPBG00000016547CSDE110094.361ENSTGUG00000000972CSDE110094.361Taeniopygia_guttata
ENSCPBG00000016547CSDE110077.053ENSTRUG00000007996csde110077.053Takifugu_rubripes
ENSCPBG00000016547CSDE19382.890ENSTNIG00000010878csde110082.890Tetraodon_nigroviridis
ENSCPBG00000016547CSDE19397.436ENSTBEG00000011880-6597.183Tupaia_belangeri
ENSCPBG00000016547CSDE110091.786ENSTTRG00000015583CSDE19491.786Tursiops_truncatus
ENSCPBG00000016547CSDE18696.040ENSUAMG00000021779-9995.765Ursus_americanus
ENSCPBG00000016547CSDE18987.118ENSUAMG00000024289-9987.118Ursus_americanus
ENSCPBG00000016547CSDE19788.361ENSUMAG00000011714-9988.361Ursus_maritimus
ENSCPBG00000016547CSDE110085.007ENSUMAG00000009720-9785.007Ursus_maritimus
ENSCPBG00000016547CSDE110093.925ENSVPAG00000000749CSDE18591.549Vicugna_pacos
ENSCPBG00000016547CSDE19091.959ENSVVUG00000009890CSDE19491.959Vulpes_vulpes
ENSCPBG00000016547CSDE19593.447ENSXETG00000021448csde110087.016Xenopus_tropicalis
ENSCPBG00000016547CSDE19287.273ENSXCOG00000000035csde19987.273Xiphophorus_couchianus
ENSCPBG00000016547CSDE110079.625ENSXMAG00000009080csde19880.000Xiphophorus_maculatus

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