EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000016631 (Gene tree)
Gene ID: 101953753
Gene Symbol: APEX2
Alias: APE2|APEXL2|XTH2|ZGRF2
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 2694 bases
Position: chrKK083246.1:370431-373124
Accession: 17889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000023298	Exo_endo_phos	PF03372.23	7.4e-13	1	1
ENSCPBP00000023295	Exo_endo_phos	PF03372.23	9.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000027444	APEX2-202	1428	-	ENSCPBP00000023298	475 (aa)	-	-
ENSCPBT00000027441	APEX2-201	1512	-	ENSCPBP00000023295	503 (aa)	XP_005282431	UPI000388CE18

Gene Model

Click here to download ENSCPBG00000016631's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000016631	APEX2	62	30.921	ENSCPBG00000009567	APEX1	80	30.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016631	APEX2	99	48.256	ENSG00000169188	APEX2	99	47.719	Homo_sapiens
ENSCPBG00000016631	APEX2	99	45.390	ENSAPOG00000005805	apex2	100	45.599	Acanthochromis_polyacanthus
ENSCPBG00000016631	APEX2	99	48.249	ENSAMEG00000003608	APEX2	99	47.776	Ailuropoda_melanoleuca
ENSCPBG00000016631	APEX2	99	46.127	ENSACIG00000010000	apex2	100	45.343	Amphilophus_citrinellus
ENSCPBG00000016631	APEX2	99	44.858	ENSAOCG00000021774	apex2	100	45.035	Amphiprion_ocellaris
ENSCPBG00000016631	APEX2	99	44.681	ENSAPEG00000020890	apex2	94	44.858	Amphiprion_percula
ENSCPBG00000016631	APEX2	99	45.565	ENSATEG00000023600	apex2	100	45.391	Anabas_testudineus
ENSCPBG00000016631	APEX2	99	61.355	ENSACAG00000011201	APEX2	99	60.956	Anolis_carolinensis
ENSCPBG00000016631	APEX2	97	43.295	ENSANAG00000020845	-	99	43.539	Aotus_nancymaae
ENSCPBG00000016631	APEX2	99	49.612	ENSANAG00000021907	-	99	49.049	Aotus_nancymaae
ENSCPBG00000016631	APEX2	99	46.154	ENSAMXG00000007422	apex2	100	45.796	Astyanax_mexicanus
ENSCPBG00000016631	APEX2	99	48.047	ENSBTAG00000013177	APEX2	99	47.692	Bos_taurus
ENSCPBG00000016631	APEX2	99	48.643	ENSCJAG00000016584	APEX2	99	48.099	Callithrix_jacchus
ENSCPBG00000016631	APEX2	99	46.199	ENSCAFG00000014310	APEX2	99	45.720	Canis_familiaris
ENSCPBG00000016631	APEX2	99	47.368	ENSCAFG00020013818	APEX2	94	54.825	Canis_lupus_dingo
ENSCPBG00000016631	APEX2	99	48.047	ENSCHIG00000019916	APEX2	99	47.852	Capra_hircus
ENSCPBG00000016631	APEX2	99	49.119	ENSTSYG00000005612	APEX2	99	47.750	Carlito_syrichta
ENSCPBG00000016631	APEX2	99	48.538	ENSCPOG00000007265	APEX2	99	47.953	Cavia_porcellus
ENSCPBG00000016631	APEX2	95	47.890	ENSCCAG00000025405	-	94	48.077	Cebus_capucinus
ENSCPBG00000016631	APEX2	99	48.263	ENSCATG00000044854	APEX2	99	47.674	Cercocebus_atys
ENSCPBG00000016631	APEX2	99	48.256	ENSCLAG00000017315	APEX2	99	48.062	Chinchilla_lanigera
ENSCPBG00000016631	APEX2	99	48.456	ENSCSAG00000012124	APEX2	99	47.287	Chlorocebus_sabaeus
ENSCPBG00000016631	APEX2	99	40.927	ENSCSAVG00000006052	-	100	40.524	Ciona_savignyi
ENSCPBG00000016631	APEX2	99	48.263	ENSCANG00000003053	APEX2	99	46.899	Colobus_angolensis_palliatus
ENSCPBG00000016631	APEX2	99	48.350	ENSCGRG00001008132	Apex2	99	47.490	Cricetulus_griseus_chok1gshd
ENSCPBG00000016631	APEX2	99	48.350	ENSCGRG00000009667	Apex2	91	58.222	Cricetulus_griseus_crigri
ENSCPBG00000016631	APEX2	99	46.760	ENSCSEG00000019900	apex2	99	46.235	Cynoglossus_semilaevis
ENSCPBG00000016631	APEX2	99	44.367	ENSCVAG00000021583	apex2	100	43.696	Cyprinodon_variegatus
ENSCPBG00000016631	APEX2	99	45.907	ENSDARG00000008472	apex2	100	45.552	Danio_rerio
ENSCPBG00000016631	APEX2	99	48.532	ENSDNOG00000038901	APEX2	99	47.082	Dasypus_novemcinctus
ENSCPBG00000016631	APEX2	99	47.773	ENSEBUG00000015654	apex2	100	47.154	Eptatretus_burgeri
ENSCPBG00000016631	APEX2	99	49.608	ENSEASG00005011694	APEX2	91	49.318	Equus_asinus_asinus
ENSCPBG00000016631	APEX2	99	49.608	ENSECAG00000026921	APEX2	91	49.318	Equus_caballus
ENSCPBG00000016631	APEX2	99	48.919	ENSEEUG00000013172	APEX2	99	47.937	Erinaceus_europaeus
ENSCPBG00000016631	APEX2	99	44.103	ENSELUG00000021417	apex2	71	59.375	Esox_lucius
ENSCPBG00000016631	APEX2	99	48.633	ENSFCAG00000021990	APEX2	99	47.961	Felis_catus
ENSCPBG00000016631	APEX2	99	49.031	ENSFDAG00000008076	APEX2	88	59.524	Fukomys_damarensis
ENSCPBG00000016631	APEX2	99	42.294	ENSFHEG00000021411	apex2	99	41.398	Fundulus_heteroclitus
ENSCPBG00000016631	APEX2	57	53.731	ENSGMOG00000019681	apex2	77	53.234	Gadus_morhua
ENSCPBG00000016631	APEX2	99	45.246	ENSGAFG00000005829	apex2	100	45.246	Gambusia_affinis
ENSCPBG00000016631	APEX2	62	61.582	ENSGACG00000012307	apex2	71	59.341	Gasterosteus_aculeatus
ENSCPBG00000016631	APEX2	89	84.967	ENSGAGG00000011520	APEX2	88	84.967	Gopherus_agassizii
ENSCPBG00000016631	APEX2	62	30.897	ENSGAGG00000014999	APEX1	80	30.897	Gopherus_agassizii
ENSCPBG00000016631	APEX2	99	48.643	ENSGGOG00000002056	APEX2	99	47.784	Gorilla_gorilla
ENSCPBG00000016631	APEX2	99	47.398	ENSHBUG00000009938	apex2	100	47.269	Haplochromis_burtoni
ENSCPBG00000016631	APEX2	99	48.654	ENSHGLG00000000273	APEX2	98	56.277	Heterocephalus_glaber_female
ENSCPBG00000016631	APEX2	62	30.097	ENSHCOG00000009961	apex1	82	30.097	Hippocampus_comes
ENSCPBG00000016631	APEX2	99	45.911	ENSHCOG00000010165	apex2	100	46.805	Hippocampus_comes
ENSCPBG00000016631	APEX2	82	61.290	ENSIPUG00000000352	APEX2	70	61.290	Ictalurus_punctatus
ENSCPBG00000016631	APEX2	99	49.225	ENSSTOG00000025121	APEX2	99	48.643	Ictidomys_tridecemlineatus
ENSCPBG00000016631	APEX2	99	48.184	ENSJJAG00000019611	Apex2	91	58.962	Jaculus_jaculus
ENSCPBG00000016631	APEX2	99	46.763	ENSKMAG00000006985	apex2	100	46.942	Kryptolebias_marmoratus
ENSCPBG00000016631	APEX2	92	54.450	ENSLBEG00000012139	apex2	100	45.550	Labrus_bergylta
ENSCPBG00000016631	APEX2	99	43.407	ENSLACG00000000865	APEX2	100	43.040	Latimeria_chalumnae
ENSCPBG00000016631	APEX2	99	49.135	ENSLOCG00000014467	apex2	100	49.568	Lepisosteus_oculatus
ENSCPBG00000016631	APEX2	99	50.097	ENSLAFG00000018312	APEX2	99	49.031	Loxodonta_africana
ENSCPBG00000016631	APEX2	99	48.069	ENSMFAG00000002486	APEX2	99	47.059	Macaca_fascicularis
ENSCPBG00000016631	APEX2	99	48.263	ENSMMUG00000008428	APEX2	99	47.818	Macaca_mulatta
ENSCPBG00000016631	APEX2	99	48.069	ENSMNEG00000036783	APEX2	99	47.148	Macaca_nemestrina
ENSCPBG00000016631	APEX2	99	48.263	ENSMLEG00000028208	APEX2	99	47.674	Mandrillus_leucophaeus
ENSCPBG00000016631	APEX2	99	44.768	ENSMAMG00000024220	apex2	100	44.768	Mastacembelus_armatus
ENSCPBG00000016631	APEX2	99	47.398	ENSMZEG00005026322	apex2	100	47.269	Maylandia_zebra
ENSCPBG00000016631	APEX2	99	47.287	ENSMICG00000043181	APEX2	99	47.093	Microcebus_murinus
ENSCPBG00000016631	APEX2	99	48.828	ENSMOCG00000004339	Apex2	99	56.667	Microtus_ochrogaster
ENSCPBG00000016631	APEX2	86	57.550	ENSMMOG00000017340	apex2	100	45.470	Mola_mola
ENSCPBG00000016631	APEX2	99	57.613	ENSMODG00000005341	APEX2	99	56.996	Monodelphis_domestica
ENSCPBG00000016631	APEX2	99	52.316	ENSMALG00000014179	apex2	100	41.809	Monopterus_albus
ENSCPBG00000016631	APEX2	99	48.084	MGP_CAROLIEiJ_G0033484	Apex2	100	54.135	Mus_caroli
ENSCPBG00000016631	APEX2	99	48.256	ENSMUSG00000025269	Apex2	99	54.135	Mus_musculus
ENSCPBG00000016631	APEX2	99	47.665	MGP_PahariEiJ_G0032023	Apex2	100	53.759	Mus_pahari
ENSCPBG00000016631	APEX2	99	48.062	MGP_SPRETEiJ_G0034654	Apex2	100	54.135	Mus_spretus
ENSCPBG00000016631	APEX2	99	48.256	ENSMPUG00000003293	APEX2	99	48.062	Mustela_putorius_furo
ENSCPBG00000016631	APEX2	99	49.012	ENSMLUG00000004562	-	99	48.317	Myotis_lucifugus
ENSCPBG00000016631	APEX2	99	49.412	ENSMLUG00000016298	-	99	48.733	Myotis_lucifugus
ENSCPBG00000016631	APEX2	99	48.047	ENSNGAG00000013576	Apex2	99	47.852	Nannospalax_galili
ENSCPBG00000016631	APEX2	99	44.483	ENSNBRG00000010099	apex2	78	54.521	Neolamprologus_brichardi
ENSCPBG00000016631	APEX2	80	51.220	ENSNLEG00000032067	-	92	51.220	Nomascus_leucogenys
ENSCPBG00000016631	APEX2	99	48.748	ENSONIG00000016881	apex2	99	48.555	Oreochromis_niloticus
ENSCPBG00000016631	APEX2	92	53.893	ENSOANG00000000689	-	96	53.893	Ornithorhynchus_anatinus
ENSCPBG00000016631	APEX2	99	43.487	ENSOCUG00000000570	APEX2	99	42.286	Oryctolagus_cuniculus
ENSCPBG00000016631	APEX2	96	52.163	ENSORLG00000014053	apex2	100	44.920	Oryzias_latipes
ENSCPBG00000016631	APEX2	96	52.163	ENSORLG00020013253	apex2	100	45.098	Oryzias_latipes_hni
ENSCPBG00000016631	APEX2	96	52.163	ENSORLG00015007515	apex2	100	44.920	Oryzias_latipes_hsok
ENSCPBG00000016631	APEX2	99	44.563	ENSOMEG00000003655	apex2	100	44.029	Oryzias_melastigma
ENSCPBG00000016631	APEX2	99	48.162	ENSOGAG00000007797	APEX2	99	47.628	Otolemur_garnettii
ENSCPBG00000016631	APEX2	99	48.047	ENSOARG00000005742	APEX2	99	47.852	Ovis_aries
ENSCPBG00000016631	APEX2	99	48.062	ENSPPAG00000035747	APEX2	99	47.399	Pan_paniscus
ENSCPBG00000016631	APEX2	99	48.633	ENSPPRG00000002440	APEX2	99	47.767	Panthera_pardus
ENSCPBG00000016631	APEX2	99	48.438	ENSPTIG00000021651	APEX2	99	47.573	Panthera_tigris_altaica
ENSCPBG00000016631	APEX2	99	48.062	ENSPTRG00000021946	APEX2	99	47.399	Pan_troglodytes
ENSCPBG00000016631	APEX2	99	48.263	ENSPANG00000003595	APEX2	99	47.674	Papio_anubis
ENSCPBG00000016631	APEX2	99	46.018	ENSPKIG00000007752	apex2	100	45.296	Paramormyrops_kingsleyae
ENSCPBG00000016631	APEX2	99	45.208	ENSPMGG00000009151	apex2	100	45.126	Periophthalmus_magnuspinnatus
ENSCPBG00000016631	APEX2	99	47.876	ENSPEMG00000016475	Apex2	98	54.321	Peromyscus_maniculatus_bairdii
ENSCPBG00000016631	APEX2	62	30.132	ENSPMAG00000007275	-	87	30.132	Petromyzon_marinus
ENSCPBG00000016631	APEX2	99	57.143	ENSPCIG00000007633	APEX2	98	56.846	Phascolarctos_cinereus
ENSCPBG00000016631	APEX2	99	45.391	ENSPFOG00000000408	apex2	100	45.423	Poecilia_formosa
ENSCPBG00000016631	APEX2	99	45.326	ENSPLAG00000023814	apex2	100	45.423	Poecilia_latipinna
ENSCPBG00000016631	APEX2	99	45.423	ENSPMEG00000023222	apex2	100	45.070	Poecilia_mexicana
ENSCPBG00000016631	APEX2	99	48.936	ENSPPYG00000020388	APEX2	99	48.269	Pongo_abelii
ENSCPBG00000016631	APEX2	99	49.031	ENSPCOG00000016083	APEX2	99	48.362	Propithecus_coquereli
ENSCPBG00000016631	APEX2	91	50.542	ENSPVAG00000007851	APEX2	99	49.784	Pteropus_vampyrus
ENSCPBG00000016631	APEX2	99	45.133	ENSPNYG00000015698	apex2	79	54.795	Pundamilia_nyererei
ENSCPBG00000016631	APEX2	99	45.763	ENSPNAG00000011666	apex2	100	44.915	Pygocentrus_nattereri
ENSCPBG00000016631	APEX2	99	48.828	ENSRNOG00000000166	Apex2	99	47.656	Rattus_norvegicus
ENSCPBG00000016631	APEX2	99	48.263	ENSRBIG00000036500	APEX2	99	47.338	Rhinopithecus_bieti
ENSCPBG00000016631	APEX2	99	48.263	ENSRROG00000032674	APEX2	99	47.338	Rhinopithecus_roxellana
ENSCPBG00000016631	APEX2	99	49.031	ENSSBOG00000030500	-	99	48.473	Saimiri_boliviensis_boliviensis
ENSCPBG00000016631	APEX2	95	42.489	ENSSBOG00000003489	-	94	41.830	Saimiri_boliviensis_boliviensis
ENSCPBG00000016631	APEX2	99	59.129	ENSSHAG00000007846	APEX2	99	58.750	Sarcophilus_harrisii
ENSCPBG00000016631	APEX2	99	48.008	ENSSFOG00015010354	apex2	100	47.628	Scleropages_formosus
ENSCPBG00000016631	APEX2	99	46.853	ENSSMAG00000012753	apex2	100	46.842	Scophthalmus_maximus
ENSCPBG00000016631	APEX2	95	54.223	ENSSDUG00000022892	apex2	100	46.679	Seriola_dumerili
ENSCPBG00000016631	APEX2	95	55.041	ENSSLDG00000024347	apex2	100	47.269	Seriola_lalandi_dorsalis
ENSCPBG00000016631	APEX2	99	48.544	ENSSARG00000010297	APEX2	99	47.692	Sorex_araneus
ENSCPBG00000016631	APEX2	99	46.561	ENSSPAG00000016279	apex2	100	46.032	Stegastes_partitus
ENSCPBG00000016631	APEX2	99	50.097	ENSSSCG00000012348	-	99	48.837	Sus_scrofa
ENSCPBG00000016631	APEX2	57	31.317	ENSTGUG00000014378	APEX1	97	31.429	Taeniopygia_guttata
ENSCPBG00000016631	APEX2	99	46.914	ENSTRUG00000015660	apex2	100	46.208	Takifugu_rubripes
ENSCPBG00000016631	APEX2	83	46.604	ENSTNIG00000003725	apex2	100	47.343	Tetraodon_nigroviridis
ENSCPBG00000016631	APEX2	91	50.649	ENSTBEG00000010520	APEX2	99	49.892	Tupaia_belangeri
ENSCPBG00000016631	APEX2	99	48.733	ENSUAMG00000004720	APEX2	94	55.702	Ursus_americanus
ENSCPBG00000016631	APEX2	99	45.809	ENSUMAG00000002892	APEX2	99	45.155	Ursus_maritimus
ENSCPBG00000016631	APEX2	99	47.368	ENSVVUG00000005989	APEX2	99	47.173	Vulpes_vulpes
ENSCPBG00000016631	APEX2	99	46.035	ENSXETG00000022026	apex2	99	45.841	Xenopus_tropicalis
ENSCPBG00000016631	APEX2	99	46.491	ENSXMAG00000025740	apex2	100	46.491	Xiphophorus_maculatus