EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000016841 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 16801 bases
Position: chrKK083780.1:24515-41315
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	1	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	2	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	3	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	4	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	5	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	6	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	7	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	8	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	9	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	10	11
ENSCPBP00000023593	zf-C2H2	PF00096.26	5.9e-64	11	11
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	1	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	2	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	3	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	4	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	5	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	6	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	7	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	8	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	9	10
ENSCPBP00000023595	zf-C2H2	PF00096.26	4.2e-62	10	10
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	1	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	2	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	3	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	4	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	5	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	6	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	7	8
ENSCPBP00000023586	zf-C2H2	PF00096.26	1.8e-48	8	8
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	1	7
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	2	7
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	3	7
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	4	7
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	5	7
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	6	7
ENSCPBP00000023590	zf-C2H2	PF00096.26	5.5e-44	7	7
ENSCPBP00000023596	zf-C2H2	PF00096.26	4e-38	1	6
ENSCPBP00000023596	zf-C2H2	PF00096.26	4e-38	2	6
ENSCPBP00000023596	zf-C2H2	PF00096.26	4e-38	3	6
ENSCPBP00000023596	zf-C2H2	PF00096.26	4e-38	4	6
ENSCPBP00000023596	zf-C2H2	PF00096.26	4e-38	5	6
ENSCPBP00000023596	zf-C2H2	PF00096.26	4e-38	6	6
ENSCPBP00000023599	zf-C2H2	PF00096.26	3.2e-29	1	4
ENSCPBP00000023599	zf-C2H2	PF00096.26	3.2e-29	2	4
ENSCPBP00000023599	zf-C2H2	PF00096.26	3.2e-29	3	4
ENSCPBP00000023599	zf-C2H2	PF00096.26	3.2e-29	4	4
ENSCPBP00000023586	zf-met	PF12874.7	0.00038	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000027783	-	1134	-	ENSCPBP00000023590	377 (aa)	-	-
ENSCPBT00000027786	-	1377	-	ENSCPBP00000023593	458 (aa)	-	-
ENSCPBT00000027779	-	1188	-	ENSCPBP00000023586	395 (aa)	-	-
ENSCPBT00000027789	-	870	-	ENSCPBP00000023596	289 (aa)	-	-
ENSCPBT00000027788	-	1161	-	ENSCPBP00000023595	386 (aa)	-	-
ENSCPBT00000027792	-	486	-	ENSCPBP00000023599	161 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000016841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000016841	-	99	67.470	ENSCPBG00000015500	-	99	65.939
ENSCPBG00000016841	-	98	65.753	ENSCPBG00000017494	-	98	63.900
ENSCPBG00000016841	-	82	41.367	ENSCPBG00000024735	PRDM5	75	43.697
ENSCPBG00000016841	-	99	66.234	ENSCPBG00000021479	-	99	65.000
ENSCPBG00000016841	-	98	65.741	ENSCPBG00000001258	-	99	64.205
ENSCPBG00000016841	-	94	67.133	ENSCPBG00000005703	-	54	67.133
ENSCPBG00000016841	-	99	58.456	ENSCPBG00000021487	-	97	57.051
ENSCPBG00000016841	-	82	42.718	ENSCPBG00000004542	ZNF865	86	41.880
ENSCPBG00000016841	-	91	57.436	ENSCPBG00000002063	-	71	57.436
ENSCPBG00000016841	-	94	39.655	ENSCPBG00000026947	ZNF319	98	43.913
ENSCPBG00000016841	-	96	54.430	ENSCPBG00000002014	-	62	58.744
ENSCPBG00000016841	-	98	78.049	ENSCPBG00000004030	-	97	70.408
ENSCPBG00000016841	-	78	47.938	ENSCPBG00000005715	ZBTB49	52	47.938
ENSCPBG00000016841	-	95	73.529	ENSCPBG00000012976	-	98	66.284
ENSCPBG00000016841	-	98	68.217	ENSCPBG00000001421	-	94	68.217
ENSCPBG00000016841	-	98	53.247	ENSCPBG00000005586	-	72	52.881
ENSCPBG00000016841	-	89	82.222	ENSCPBG00000003774	-	99	63.445
ENSCPBG00000016841	-	99	64.593	ENSCPBG00000001272	-	98	64.854
ENSCPBG00000016841	-	97	53.922	ENSCPBG00000009849	-	83	53.922
ENSCPBG00000016841	-	81	44.649	ENSCPBG00000013652	-	67	49.020
ENSCPBG00000016841	-	99	63.780	ENSCPBG00000004990	-	100	63.347
ENSCPBG00000016841	-	98	63.758	ENSCPBG00000009609	-	97	57.212
ENSCPBG00000016841	-	96	50.833	ENSCPBG00000008580	-	100	48.039
ENSCPBG00000016841	-	97	72.381	ENSCPBG00000003130	-	97	70.518
ENSCPBG00000016841	-	98	55.405	ENSCPBG00000001526	-	79	55.405
ENSCPBG00000016841	-	100	70.513	ENSCPBG00000001181	-	99	69.167
ENSCPBG00000016841	-	97	44.805	ENSCPBG00000023418	-	61	43.617
ENSCPBG00000016841	-	99	65.831	ENSCPBG00000002430	-	98	65.831
ENSCPBG00000016841	-	97	65.686	ENSCPBG00000026433	-	77	54.717
ENSCPBG00000016841	-	99	66.883	ENSCPBG00000017489	-	99	66.109
ENSCPBG00000016841	-	98	55.921	ENSCPBG00000015987	-	85	58.784

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016841	-	89	59.712	ENSAMXG00000029161	-	79	65.000	Astyanax_mexicanus
ENSCPBG00000016841	-	99	61.350	ENSGAGG00000016529	-	96	61.494	Gopherus_agassizii
ENSCPBG00000016841	-	99	66.000	ENSGAGG00000014356	-	91	65.900	Gopherus_agassizii
ENSCPBG00000016841	-	98	71.429	ENSGAGG00000010833	-	98	67.249	Gopherus_agassizii
ENSCPBG00000016841	-	99	64.828	ENSGAGG00000009272	-	97	64.828	Gopherus_agassizii
ENSCPBG00000016841	-	98	62.416	ENSGAGG00000011487	-	99	59.200	Gopherus_agassizii
ENSCPBG00000016841	-	98	75.610	ENSGAGG00000010324	-	95	62.025	Gopherus_agassizii
ENSCPBG00000016841	-	97	88.571	ENSGAGG00000020134	-	72	90.698	Gopherus_agassizii
ENSCPBG00000016841	-	99	67.722	ENSGAGG00000012452	-	94	69.397	Gopherus_agassizii
ENSCPBG00000016841	-	95	82.051	ENSGAGG00000001645	-	92	63.525	Gopherus_agassizii
ENSCPBG00000016841	-	99	66.341	ENSGAGG00000002214	-	99	66.436	Gopherus_agassizii
ENSCPBG00000016841	-	98	64.384	ENSGAGG00000018445	-	95	56.459	Gopherus_agassizii
ENSCPBG00000016841	-	96	66.038	ENSGAGG00000002179	-	98	63.509	Gopherus_agassizii
ENSCPBG00000016841	-	99	60.544	ENSPSIG00000000522	-	100	60.714	Pelodiscus_sinensis
ENSCPBG00000016841	-	97	65.359	ENSPSIG00000012865	-	98	62.424	Pelodiscus_sinensis
ENSCPBG00000016841	-	98	66.942	ENSPSIG00000001026	-	90	66.942	Pelodiscus_sinensis
ENSCPBG00000016841	-	97	61.224	ENSPSIG00000015465	-	98	57.895	Pelodiscus_sinensis
ENSCPBG00000016841	-	99	66.412	ENSPSIG00000009893	-	99	67.633	Pelodiscus_sinensis
ENSCPBG00000016841	-	98	61.635	ENSPSIG00000015216	-	91	59.669	Pelodiscus_sinensis
ENSCPBG00000016841	-	90	63.758	ENSPSIG00000002569	-	94	64.906	Pelodiscus_sinensis
ENSCPBG00000016841	-	97	59.184	ENSTGUG00000014888	-	100	59.624	Taeniopygia_guttata
ENSCPBG00000016841	-	81	58.730	ENSTGUG00000018518	-	100	61.111	Taeniopygia_guttata
ENSCPBG00000016841	-	89	60.563	ENSTGUG00000018374	-	99	60.563	Taeniopygia_guttata
ENSCPBG00000016841	-	96	57.143	ENSTGUG00000016781	-	100	58.303	Taeniopygia_guttata
ENSCPBG00000016841	-	95	58.503	ENSTGUG00000016850	-	100	58.755	Taeniopygia_guttata
ENSCPBG00000016841	-	90	50.888	ENSTGUG00000015260	-	100	54.545	Taeniopygia_guttata
ENSCPBG00000016841	-	93	60.544	ENSTGUG00000016516	-	100	61.411	Taeniopygia_guttata
ENSCPBG00000016841	-	97	59.184	ENSTGUG00000013736	-	100	62.000	Taeniopygia_guttata
ENSCPBG00000016841	-	97	57.955	ENSTGUG00000018445	-	97	58.376	Taeniopygia_guttata
ENSCPBG00000016841	-	96	60.274	ENSTGUG00000018327	-	100	64.000	Taeniopygia_guttata
ENSCPBG00000016841	-	95	62.025	ENSTGUG00000018542	-	100	65.333	Taeniopygia_guttata
ENSCPBG00000016841	-	90	63.793	ENSTGUG00000018349	-	100	66.667	Taeniopygia_guttata
ENSCPBG00000016841	-	96	57.143	ENSTGUG00000014614	-	99	61.000	Taeniopygia_guttata