EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000016843 (Gene tree)
Gene ID: 101933800
Gene Symbol: CLP1
Alias: HEAB|hClp1
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 4702 bases
Position: chrKK082996.1:1808172-1812873
Accession: 16999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000023587	Clp1	PF06807.14	4.5e-31	1	1
ENSCPBP00000023588	Clp1	PF06807.14	4.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000027781	CLP1-202	2134	-	ENSCPBP00000023588	425 (aa)	XP_005295013	UPI000388A35D
ENSCPBT00000027780	CLP1-201	2049	XM_005294955	ENSCPBP00000023587	425 (aa)	XP_005295012	UPI000388A35D

Gene Model

Click here to download ENSCPBG00000016843's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000016843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000016843	CLP1	100	94.353	ENSG00000172409	CLP1	100	94.353	Homo_sapiens
ENSCPBG00000016843	CLP1	98	76.179	ENSAPOG00000008242	clp1	96	76.179	Acanthochromis_polyacanthus
ENSCPBG00000016843	CLP1	100	94.353	ENSAMEG00000014551	CLP1	98	94.353	Ailuropoda_melanoleuca
ENSCPBG00000016843	CLP1	99	74.537	ENSACIG00000006310	clp1	97	74.537	Amphilophus_citrinellus
ENSCPBG00000016843	CLP1	99	75.058	ENSAOCG00000010681	clp1	99	75.058	Amphiprion_ocellaris
ENSCPBG00000016843	CLP1	98	76.179	ENSAPEG00000012165	clp1	99	76.179	Amphiprion_percula
ENSCPBG00000016843	CLP1	99	75.463	ENSATEG00000012374	clp1	98	75.463	Anabas_testudineus
ENSCPBG00000016843	CLP1	100	95.529	ENSACAG00000007139	CLP1	100	95.529	Anolis_carolinensis
ENSCPBG00000016843	CLP1	100	94.353	ENSANAG00000034935	CLP1	100	94.353	Aotus_nancymaae
ENSCPBG00000016843	CLP1	99	74.769	ENSACLG00000013573	clp1	98	74.769	Astatotilapia_calliptera
ENSCPBG00000016843	CLP1	97	79.286	ENSAMXG00000014194	clp1	98	79.097	Astyanax_mexicanus
ENSCPBG00000016843	CLP1	100	94.353	ENSBTAG00000006493	CLP1	100	94.353	Bos_taurus
ENSCPBG00000016843	CLP1	98	47.393	WBGene00010304	clpf-1	98	47.393	Caenorhabditis_elegans
ENSCPBG00000016843	CLP1	100	94.353	ENSCJAG00000008748	CLP1	100	94.353	Callithrix_jacchus
ENSCPBG00000016843	CLP1	100	94.353	ENSCAFG00000007815	CLP1	100	94.353	Canis_familiaris
ENSCPBG00000016843	CLP1	100	94.353	ENSCAFG00020000903	CLP1	100	94.353	Canis_lupus_dingo
ENSCPBG00000016843	CLP1	100	94.118	ENSCHIG00000023497	CLP1	100	94.118	Capra_hircus
ENSCPBG00000016843	CLP1	100	94.824	ENSTSYG00000006824	CLP1	99	94.824	Carlito_syrichta
ENSCPBG00000016843	CLP1	100	94.353	ENSCAPG00000009703	CLP1	100	94.353	Cavia_aperea
ENSCPBG00000016843	CLP1	98	95.192	ENSCPOG00000012554	CLP1	99	95.192	Cavia_porcellus
ENSCPBG00000016843	CLP1	100	93.882	ENSCCAG00000031957	CLP1	100	93.882	Cebus_capucinus
ENSCPBG00000016843	CLP1	100	94.353	ENSCATG00000044628	CLP1	100	94.353	Cercocebus_atys
ENSCPBG00000016843	CLP1	100	94.588	ENSCLAG00000004094	CLP1	100	94.588	Chinchilla_lanigera
ENSCPBG00000016843	CLP1	100	94.353	ENSCSAG00000005994	CLP1	100	94.353	Chlorocebus_sabaeus
ENSCPBG00000016843	CLP1	99	62.175	ENSCING00000003779	-	98	62.175	Ciona_intestinalis
ENSCPBG00000016843	CLP1	99	63.121	ENSCSAVG00000003437	-	99	63.121	Ciona_savignyi
ENSCPBG00000016843	CLP1	100	94.353	ENSCANG00000034335	CLP1	100	94.353	Colobus_angolensis_palliatus
ENSCPBG00000016843	CLP1	100	93.882	ENSCGRG00001002227	CLP1	100	93.882	Cricetulus_griseus_chok1gshd
ENSCPBG00000016843	CLP1	100	93.882	ENSCGRG00000004328	CLP1	100	93.882	Cricetulus_griseus_crigri
ENSCPBG00000016843	CLP1	99	74.710	ENSCSEG00000008614	clp1	98	74.710	Cynoglossus_semilaevis
ENSCPBG00000016843	CLP1	99	75.463	ENSCVAG00000020101	clp1	98	75.463	Cyprinodon_variegatus
ENSCPBG00000016843	CLP1	97	79.904	ENSDARG00000063663	clp1	96	78.454	Danio_rerio
ENSCPBG00000016843	CLP1	99	93.868	ENSDNOG00000042415	CLP1	90	93.868	Dasypus_novemcinctus
ENSCPBG00000016843	CLP1	100	93.882	ENSDORG00000014685	Clp1	100	93.882	Dipodomys_ordii
ENSCPBG00000016843	CLP1	99	55.399	FBgn0033842	cbc	99	55.399	Drosophila_melanogaster
ENSCPBG00000016843	CLP1	100	94.588	ENSETEG00000003009	CLP1	100	94.588	Echinops_telfairi
ENSCPBG00000016843	CLP1	99	72.706	ENSEBUG00000011648	clp1	99	72.706	Eptatretus_burgeri
ENSCPBG00000016843	CLP1	100	94.353	ENSEASG00005002093	CLP1	100	94.353	Equus_asinus_asinus
ENSCPBG00000016843	CLP1	100	94.353	ENSECAG00000011597	CLP1	100	94.353	Equus_caballus
ENSCPBG00000016843	CLP1	100	94.824	ENSEEUG00000012771	CLP1	100	94.824	Erinaceus_europaeus
ENSCPBG00000016843	CLP1	97	79.524	ENSELUG00000024048	clp1	95	79.524	Esox_lucius
ENSCPBG00000016843	CLP1	100	94.353	ENSFCAG00000006633	CLP1	100	94.353	Felis_catus
ENSCPBG00000016843	CLP1	100	95.059	ENSFALG00000011145	CLP1	100	95.059	Ficedula_albicollis
ENSCPBG00000016843	CLP1	100	94.588	ENSFDAG00000000234	CLP1	100	94.588	Fukomys_damarensis
ENSCPBG00000016843	CLP1	99	74.769	ENSFHEG00000014760	CLP1	98	74.769	Fundulus_heteroclitus
ENSCPBG00000016843	CLP1	97	79.616	ENSGMOG00000019340	clp1	95	79.616	Gadus_morhua
ENSCPBG00000016843	CLP1	100	96.235	ENSGALG00000007370	CLP1	100	96.235	Gallus_gallus
ENSCPBG00000016843	CLP1	99	75.231	ENSGAFG00000003020	clp1	99	75.231	Gambusia_affinis
ENSCPBG00000016843	CLP1	99	75.926	ENSGACG00000017832	clp1	98	75.926	Gasterosteus_aculeatus
ENSCPBG00000016843	CLP1	100	99.765	ENSGAGG00000013279	CLP1	100	99.765	Gopherus_agassizii
ENSCPBG00000016843	CLP1	100	94.353	ENSGGOG00000023006	CLP1	100	94.353	Gorilla_gorilla
ENSCPBG00000016843	CLP1	99	74.537	ENSHBUG00000010436	clp1	98	74.537	Haplochromis_burtoni
ENSCPBG00000016843	CLP1	100	94.588	ENSHGLG00000009914	CLP1	100	94.588	Heterocephalus_glaber_female
ENSCPBG00000016843	CLP1	100	94.588	ENSHGLG00100006105	CLP1	100	94.588	Heterocephalus_glaber_male
ENSCPBG00000016843	CLP1	99	76.092	ENSHCOG00000010072	clp1	99	76.092	Hippocampus_comes
ENSCPBG00000016843	CLP1	99	77.045	ENSIPUG00000016238	clp1	98	77.045	Ictalurus_punctatus
ENSCPBG00000016843	CLP1	100	94.118	ENSSTOG00000029257	CLP1	100	94.118	Ictidomys_tridecemlineatus
ENSCPBG00000016843	CLP1	100	93.647	ENSJJAG00000023691	Clp1	100	93.647	Jaculus_jaculus
ENSCPBG00000016843	CLP1	99	75.231	ENSKMAG00000011990	clp1	98	75.231	Kryptolebias_marmoratus
ENSCPBG00000016843	CLP1	99	75.926	ENSLBEG00000010201	clp1	98	75.926	Labrus_bergylta
ENSCPBG00000016843	CLP1	100	87.294	ENSLACG00000003160	CLP1	100	87.294	Latimeria_chalumnae
ENSCPBG00000016843	CLP1	73	77.019	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSCPBG00000016843	CLP1	100	94.824	ENSLAFG00000014907	CLP1	100	94.824	Loxodonta_africana
ENSCPBG00000016843	CLP1	100	94.353	ENSMFAG00000046074	CLP1	100	94.353	Macaca_fascicularis
ENSCPBG00000016843	CLP1	100	94.353	ENSMMUG00000038007	CLP1	99	94.353	Macaca_mulatta
ENSCPBG00000016843	CLP1	100	94.353	ENSMNEG00000000259	CLP1	100	94.353	Macaca_nemestrina
ENSCPBG00000016843	CLP1	100	94.353	ENSMLEG00000043556	CLP1	100	94.353	Mandrillus_leucophaeus
ENSCPBG00000016843	CLP1	100	75.058	ENSMAMG00000002149	clp1	98	75.058	Mastacembelus_armatus
ENSCPBG00000016843	CLP1	99	74.769	ENSMZEG00005002850	clp1	98	74.769	Maylandia_zebra
ENSCPBG00000016843	CLP1	100	96.235	ENSMGAG00000009643	CLP1	100	96.235	Meleagris_gallopavo
ENSCPBG00000016843	CLP1	100	94.118	ENSMAUG00000016261	Clp1	100	94.118	Mesocricetus_auratus
ENSCPBG00000016843	CLP1	100	94.353	ENSMICG00000004895	CLP1	100	94.353	Microcebus_murinus
ENSCPBG00000016843	CLP1	100	94.118	ENSMOCG00000005498	Clp1	100	94.118	Microtus_ochrogaster
ENSCPBG00000016843	CLP1	98	78.302	ENSMMOG00000003229	clp1	96	78.302	Mola_mola
ENSCPBG00000016843	CLP1	100	94.824	ENSMODG00000020107	-	100	94.824	Monodelphis_domestica
ENSCPBG00000016843	CLP1	100	94.824	ENSMODG00000024148	-	100	94.824	Monodelphis_domestica
ENSCPBG00000016843	CLP1	100	74.365	ENSMALG00000014239	clp1	98	74.365	Monopterus_albus
ENSCPBG00000016843	CLP1	100	94.118	MGP_CAROLIEiJ_G0023726	Clp1	100	94.118	Mus_caroli
ENSCPBG00000016843	CLP1	100	94.118	ENSMUSG00000027079	Clp1	100	94.118	Mus_musculus
ENSCPBG00000016843	CLP1	100	93.882	MGP_PahariEiJ_G0025177	Clp1	100	93.882	Mus_pahari
ENSCPBG00000016843	CLP1	100	94.118	MGP_SPRETEiJ_G0024646	Clp1	100	94.118	Mus_spretus
ENSCPBG00000016843	CLP1	100	94.353	ENSMPUG00000000268	CLP1	100	94.353	Mustela_putorius_furo
ENSCPBG00000016843	CLP1	100	94.118	ENSMLUG00000007904	CLP1	100	94.118	Myotis_lucifugus
ENSCPBG00000016843	CLP1	100	94.118	ENSNGAG00000006165	Clp1	100	94.118	Nannospalax_galili
ENSCPBG00000016843	CLP1	99	74.769	ENSNBRG00000005225	clp1	98	74.769	Neolamprologus_brichardi
ENSCPBG00000016843	CLP1	82	88.400	ENSNLEG00000012809	-	100	88.400	Nomascus_leucogenys
ENSCPBG00000016843	CLP1	100	94.353	ENSMEUG00000010949	CLP1	99	94.353	Notamacropus_eugenii
ENSCPBG00000016843	CLP1	70	95.302	ENSOPRG00000007329	CLP1	100	95.302	Ochotona_princeps
ENSCPBG00000016843	CLP1	100	94.588	ENSODEG00000011410	CLP1	100	94.588	Octodon_degus
ENSCPBG00000016843	CLP1	99	74.537	ENSONIG00000005089	clp1	98	74.537	Oreochromis_niloticus
ENSCPBG00000016843	CLP1	100	93.882	ENSOCUG00000007045	CLP1	100	93.882	Oryctolagus_cuniculus
ENSCPBG00000016843	CLP1	99	74.074	ENSORLG00000003647	clp1	98	74.074	Oryzias_latipes
ENSCPBG00000016843	CLP1	99	73.843	ENSORLG00020016676	clp1	98	73.843	Oryzias_latipes_hni
ENSCPBG00000016843	CLP1	99	74.074	ENSORLG00015019484	clp1	98	74.074	Oryzias_latipes_hsok
ENSCPBG00000016843	CLP1	99	74.478	ENSOMEG00000021303	clp1	98	74.478	Oryzias_melastigma
ENSCPBG00000016843	CLP1	100	94.353	ENSOGAG00000004508	CLP1	100	94.353	Otolemur_garnettii
ENSCPBG00000016843	CLP1	100	92.941	ENSOARG00000010145	CLP1	98	92.941	Ovis_aries
ENSCPBG00000016843	CLP1	100	94.353	ENSPPAG00000041519	CLP1	100	94.353	Pan_paniscus
ENSCPBG00000016843	CLP1	100	94.353	ENSPPRG00000006135	CLP1	100	94.353	Panthera_pardus
ENSCPBG00000016843	CLP1	100	94.353	ENSPTIG00000015866	CLP1	100	94.353	Panthera_tigris_altaica
ENSCPBG00000016843	CLP1	100	94.353	ENSPTRG00000047318	CLP1	100	94.353	Pan_troglodytes
ENSCPBG00000016843	CLP1	100	94.353	ENSPANG00000017078	CLP1	97	94.353	Papio_anubis
ENSCPBG00000016843	CLP1	97	80.145	ENSPKIG00000007697	clp1	94	80.145	Paramormyrops_kingsleyae
ENSCPBG00000016843	CLP1	95	96.269	ENSPSIG00000005468	CLP1	100	96.269	Pelodiscus_sinensis
ENSCPBG00000016843	CLP1	97	77.619	ENSPMGG00000012171	clp1	95	77.619	Periophthalmus_magnuspinnatus
ENSCPBG00000016843	CLP1	100	94.118	ENSPEMG00000011213	-	100	94.118	Peromyscus_maniculatus_bairdii
ENSCPBG00000016843	CLP1	100	75.117	ENSPMAG00000006707	clp1	100	75.117	Petromyzon_marinus
ENSCPBG00000016843	CLP1	100	95.059	ENSPCIG00000011899	CLP1	99	95.059	Phascolarctos_cinereus
ENSCPBG00000016843	CLP1	99	75.000	ENSPFOG00000008169	clp1	98	75.000	Poecilia_formosa
ENSCPBG00000016843	CLP1	99	75.174	ENSPLAG00000022388	clp1	99	75.174	Poecilia_latipinna
ENSCPBG00000016843	CLP1	99	75.174	ENSPMEG00000021088	clp1	99	75.174	Poecilia_mexicana
ENSCPBG00000016843	CLP1	99	75.000	ENSPREG00000017802	clp1	98	75.000	Poecilia_reticulata
ENSCPBG00000016843	CLP1	53	95.089	ENSPPYG00000003266	-	100	95.089	Pongo_abelii
ENSCPBG00000016843	CLP1	100	94.353	ENSPCOG00000000360	CLP1	98	94.353	Propithecus_coquereli
ENSCPBG00000016843	CLP1	100	94.353	ENSPVAG00000016270	CLP1	100	94.353	Pteropus_vampyrus
ENSCPBG00000016843	CLP1	99	74.537	ENSPNYG00000017274	clp1	97	74.537	Pundamilia_nyererei
ENSCPBG00000016843	CLP1	97	79.762	ENSPNAG00000026460	clp1	94	79.762	Pygocentrus_nattereri
ENSCPBG00000016843	CLP1	100	94.118	ENSRNOG00000007416	Clp1	100	94.118	Rattus_norvegicus
ENSCPBG00000016843	CLP1	100	94.353	ENSRBIG00000018191	CLP1	100	94.353	Rhinopithecus_bieti
ENSCPBG00000016843	CLP1	100	94.353	ENSRROG00000039265	CLP1	100	94.353	Rhinopithecus_roxellana
ENSCPBG00000016843	CLP1	96	76.355	ENSSBOG00000010558	-	93	76.355	Saimiri_boliviensis_boliviensis
ENSCPBG00000016843	CLP1	100	94.353	ENSSBOG00000032517	-	100	94.353	Saimiri_boliviensis_boliviensis
ENSCPBG00000016843	CLP1	100	94.588	ENSSHAG00000015695	CLP1	100	94.588	Sarcophilus_harrisii
ENSCPBG00000016843	CLP1	97	78.824	ENSSFOG00015000628	clp1	98	77.650	Scleropages_formosus
ENSCPBG00000016843	CLP1	99	75.000	ENSSMAG00000019423	clp1	97	75.000	Scophthalmus_maximus
ENSCPBG00000016843	CLP1	99	75.694	ENSSDUG00000014495	clp1	98	75.694	Seriola_dumerili
ENSCPBG00000016843	CLP1	99	75.463	ENSSLDG00000000937	clp1	98	75.463	Seriola_lalandi_dorsalis
ENSCPBG00000016843	CLP1	52	95.516	ENSSARG00000002459	CLP1	100	95.516	Sorex_araneus
ENSCPBG00000016843	CLP1	100	96.706	ENSSPUG00000016811	CLP1	100	96.706	Sphenodon_punctatus
ENSCPBG00000016843	CLP1	98	75.708	ENSSPAG00000016052	clp1	96	75.708	Stegastes_partitus
ENSCPBG00000016843	CLP1	100	94.353	ENSSSCG00000031442	CLP1	100	94.353	Sus_scrofa
ENSCPBG00000016843	CLP1	100	94.824	ENSTGUG00000007002	CLP1	100	94.824	Taeniopygia_guttata
ENSCPBG00000016843	CLP1	99	76.636	ENSTRUG00000012602	clp1	98	76.636	Takifugu_rubripes
ENSCPBG00000016843	CLP1	99	75.701	ENSTNIG00000013125	clp1	98	75.701	Tetraodon_nigroviridis
ENSCPBG00000016843	CLP1	100	93.647	ENSTBEG00000009975	CLP1	100	93.647	Tupaia_belangeri
ENSCPBG00000016843	CLP1	100	93.882	ENSTTRG00000002096	CLP1	100	93.882	Tursiops_truncatus
ENSCPBG00000016843	CLP1	100	94.353	ENSUAMG00000011388	CLP1	100	94.353	Ursus_americanus
ENSCPBG00000016843	CLP1	100	94.353	ENSUMAG00000018317	CLP1	100	94.353	Ursus_maritimus
ENSCPBG00000016843	CLP1	100	94.353	ENSVVUG00000017138	CLP1	97	94.353	Vulpes_vulpes
ENSCPBG00000016843	CLP1	97	78.502	ENSXETG00000007088	clp1	95	79.469	Xenopus_tropicalis
ENSCPBG00000016843	CLP1	99	75.000	ENSXCOG00000002287	clp1	98	75.000	Xiphophorus_couchianus
ENSCPBG00000016843	CLP1	99	75.000	ENSXMAG00000009783	clp1	98	75.000	Xiphophorus_maculatus