EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017052 (Gene tree)
Gene ID: 101951024
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 26491 bases
Position: chrKK082985.1:128341-154831
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000023919	RRM_1	PF00076.22	9.4e-37	1	2
ENSCPBP00000023919	RRM_1	PF00076.22	9.4e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028175	-	3046	-	ENSCPBP00000023919	618 (aa)	-	UPI000388E41B

Gene Model

Click here to download ENSCPBG00000017052's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017052	-	76	60.630	ENSCPBG00000024789	MYEF2	73	57.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017052	-	100	76.396	ENSG00000099783	HNRNPM	99	72.330	Homo_sapiens
ENSCPBG00000017052	-	99	54.000	ENSAPOG00000001463	hnrnpm	91	54.475	Acanthochromis_polyacanthus
ENSCPBG00000017052	-	100	76.396	ENSAMEG00000004979	HNRNPM	91	77.671	Ailuropoda_melanoleuca
ENSCPBG00000017052	-	99	52.640	ENSACIG00000011870	hnrnpm	93	56.000	Amphilophus_citrinellus
ENSCPBG00000017052	-	99	53.115	ENSAOCG00000008519	hnrnpm	96	54.012	Amphiprion_ocellaris
ENSCPBG00000017052	-	99	53.115	ENSAPEG00000004257	hnrnpm	92	54.167	Amphiprion_percula
ENSCPBG00000017052	-	99	51.914	ENSATEG00000008976	hnrnpm	94	54.167	Anabas_testudineus
ENSCPBG00000017052	-	100	81.745	ENSAPLG00000010149	HNRNPM	96	82.876	Anas_platyrhynchos
ENSCPBG00000017052	-	98	66.516	ENSANAG00000019489	-	86	64.031	Aotus_nancymaae
ENSCPBG00000017052	-	100	76.874	ENSANAG00000025358	HNRNPM	100	70.787	Aotus_nancymaae
ENSCPBG00000017052	-	99	51.777	ENSACLG00000020495	hnrnpm	96	53.549	Astatotilapia_calliptera
ENSCPBG00000017052	-	99	51.420	ENSAMXG00000016073	hnrnpm	85	56.049	Astyanax_mexicanus
ENSCPBG00000017052	-	100	76.236	ENSBTAG00000021039	HNRNPM	91	77.512	Bos_taurus
ENSCPBG00000017052	-	52	47.773	ENSBTAG00000048355	-	99	49.801	Bos_taurus
ENSCPBG00000017052	-	100	76.396	ENSCJAG00000010802	HNRNPM	91	77.671	Callithrix_jacchus
ENSCPBG00000017052	-	100	71.132	ENSCAFG00000018524	HNRNPM	84	72.727	Canis_familiaris
ENSCPBG00000017052	-	100	71.981	ENSCAFG00020022128	HNRNPM	100	73.529	Canis_lupus_dingo
ENSCPBG00000017052	-	100	70.973	ENSCHIG00000026313	HNRNPM	90	72.568	Capra_hircus
ENSCPBG00000017052	-	99	63.218	ENSTSYG00000037074	-	89	64.437	Carlito_syrichta
ENSCPBG00000017052	-	100	58.003	ENSTSYG00000030502	-	84	60.160	Carlito_syrichta
ENSCPBG00000017052	-	100	76.715	ENSTSYG00000011487	-	97	77.113	Carlito_syrichta
ENSCPBG00000017052	-	91	70.123	ENSCAPG00000011505	HNRNPM	97	70.123	Cavia_aperea
ENSCPBG00000017052	-	100	76.236	ENSCPOG00000015182	HNRNPM	91	77.193	Cavia_porcellus
ENSCPBG00000017052	-	99	66.453	ENSCCAG00000018580	-	100	66.774	Cebus_capucinus
ENSCPBG00000017052	-	100	76.274	ENSCCAG00000018782	HNRNPM	100	70.673	Cebus_capucinus
ENSCPBG00000017052	-	100	76.396	ENSCATG00000035478	HNRNPM	91	77.671	Cercocebus_atys
ENSCPBG00000017052	-	99	54.911	ENSCLAG00000003049	-	89	55.360	Chinchilla_lanigera
ENSCPBG00000017052	-	100	76.236	ENSCLAG00000011194	-	91	77.193	Chinchilla_lanigera
ENSCPBG00000017052	-	100	68.239	ENSCSAG00000008009	HNRNPM	90	67.807	Chlorocebus_sabaeus
ENSCPBG00000017052	-	100	76.077	ENSCHOG00000013627	HNRNPM	91	77.352	Choloepus_hoffmanni
ENSCPBG00000017052	-	100	74.960	ENSCANG00000043491	HNRNPM	95	76.236	Colobus_angolensis_palliatus
ENSCPBG00000017052	-	90	53.231	ENSCANG00000041671	-	98	63.894	Colobus_angolensis_palliatus
ENSCPBG00000017052	-	100	65.391	ENSCGRG00001022655	-	90	65.391	Cricetulus_griseus_chok1gshd
ENSCPBG00000017052	-	98	64.098	ENSCGRG00001004486	-	89	63.607	Cricetulus_griseus_chok1gshd
ENSCPBG00000017052	-	100	57.742	ENSCGRG00001008003	-	91	58.065	Cricetulus_griseus_chok1gshd
ENSCPBG00000017052	-	100	47.468	ENSCGRG00001004249	-	91	49.677	Cricetulus_griseus_chok1gshd
ENSCPBG00000017052	-	95	76.372	ENSCGRG00001012021	-	72	77.885	Cricetulus_griseus_chok1gshd
ENSCPBG00000017052	-	98	64.098	ENSCGRG00000003596	-	89	63.607	Cricetulus_griseus_crigri
ENSCPBG00000017052	-	99	63.604	ENSCGRG00000010065	-	83	63.604	Cricetulus_griseus_crigri
ENSCPBG00000017052	-	100	75.917	ENSCGRG00000012441	-	91	76.555	Cricetulus_griseus_crigri
ENSCPBG00000017052	-	100	57.742	ENSCGRG00000012006	-	91	58.065	Cricetulus_griseus_crigri
ENSCPBG00000017052	-	99	55.185	ENSCSEG00000014980	hnrnpm	91	52.995	Cynoglossus_semilaevis
ENSCPBG00000017052	-	99	53.385	ENSCVAG00000020838	hnrnpm	92	53.149	Cyprinodon_variegatus
ENSCPBG00000017052	-	61	60.526	ENSDARG00000061735	hnrnpm	100	67.068	Danio_rerio
ENSCPBG00000017052	-	100	76.625	ENSDNOG00000012157	HNRNPM	84	77.864	Dasypus_novemcinctus
ENSCPBG00000017052	-	100	76.236	ENSDORG00000008105	Hnrnpm	91	77.512	Dipodomys_ordii
ENSCPBG00000017052	-	100	74.801	ENSETEG00000019712	HNRNPM	91	76.077	Echinops_telfairi
ENSCPBG00000017052	-	100	71.827	ENSEASG00005022434	HNRNPM	83	73.375	Equus_asinus_asinus
ENSCPBG00000017052	-	100	73.408	ENSECAG00000023868	HNRNPM	83	75.318	Equus_caballus
ENSCPBG00000017052	-	54	100.000	ENSEEUG00000001929	-	53	100.000	Erinaceus_europaeus
ENSCPBG00000017052	-	99	55.538	ENSELUG00000021183	hnrnpm	86	56.240	Esox_lucius
ENSCPBG00000017052	-	100	73.567	ENSFCAG00000015218	HNRNPM	84	74.841	Felis_catus
ENSCPBG00000017052	-	100	80.452	ENSFALG00000001059	HNRNPM	100	80.452	Ficedula_albicollis
ENSCPBG00000017052	-	100	76.396	ENSFDAG00000014680	HNRNPM	91	76.874	Fukomys_damarensis
ENSCPBG00000017052	-	99	54.631	ENSFHEG00000006712	hnrnpm	88	55.296	Fundulus_heteroclitus
ENSCPBG00000017052	-	99	52.866	ENSGMOG00000009724	hnrnpm	95	51.817	Gadus_morhua
ENSCPBG00000017052	-	100	83.360	ENSGALG00000000377	HNRNPM	91	84.330	Gallus_gallus
ENSCPBG00000017052	-	99	53.253	ENSGAFG00000013798	hnrnpm	87	68.421	Gambusia_affinis
ENSCPBG00000017052	-	99	55.140	ENSGACG00000010265	hnrnpm	98	55.832	Gasterosteus_aculeatus
ENSCPBG00000017052	-	100	99.191	ENSGAGG00000019124	-	100	99.191	Gopherus_agassizii
ENSCPBG00000017052	-	100	76.396	ENSGGOG00000003498	HNRNPM	91	77.671	Gorilla_gorilla
ENSCPBG00000017052	-	99	53.752	ENSHBUG00000023451	hnrnpm	96	55.436	Haplochromis_burtoni
ENSCPBG00000017052	-	92	100.000	ENSHGLG00000009796	-	90	100.000	Heterocephalus_glaber_female
ENSCPBG00000017052	-	100	75.279	ENSHGLG00100006675	-	91	76.077	Heterocephalus_glaber_male
ENSCPBG00000017052	-	99	52.446	ENSHCOG00000019984	hnrnpm	95	54.101	Hippocampus_comes
ENSCPBG00000017052	-	99	57.277	ENSIPUG00000025097	hnrnpm	85	58.594	Ictalurus_punctatus
ENSCPBG00000017052	-	100	76.396	ENSSTOG00000008112	HNRNPM	91	77.671	Ictidomys_tridecemlineatus
ENSCPBG00000017052	-	100	76.396	ENSJJAG00000017319	Hnrnpm	91	77.352	Jaculus_jaculus
ENSCPBG00000017052	-	99	53.963	ENSKMAG00000022136	hnrnpm	83	56.814	Kryptolebias_marmoratus
ENSCPBG00000017052	-	74	65.066	ENSLBEG00000004545	hnrnpm	92	52.018	Labrus_bergylta
ENSCPBG00000017052	-	99	50.158	ENSLACG00000016814	HNRNPM	97	49.449	Latimeria_chalumnae
ENSCPBG00000017052	-	99	56.847	ENSLOCG00000004456	hnrnpm	94	58.730	Lepisosteus_oculatus
ENSCPBG00000017052	-	100	75.118	ENSLAFG00000013603	HNRNPM	96	77.273	Loxodonta_africana
ENSCPBG00000017052	-	100	76.396	ENSMFAG00000037617	HNRNPM	91	77.671	Macaca_fascicularis
ENSCPBG00000017052	-	100	76.715	ENSMMUG00000018806	HNRNPM	97	77.113	Macaca_mulatta
ENSCPBG00000017052	-	100	76.396	ENSMNEG00000036546	HNRNPM	91	77.671	Macaca_nemestrina
ENSCPBG00000017052	-	100	76.396	ENSMLEG00000042113	HNRNPM	91	77.671	Mandrillus_leucophaeus
ENSCPBG00000017052	-	99	53.988	ENSMAMG00000005612	hnrnpm	90	53.692	Mastacembelus_armatus
ENSCPBG00000017052	-	99	52.799	ENSMZEG00005002512	hnrnpm	91	56.105	Maylandia_zebra
ENSCPBG00000017052	-	100	85.829	ENSMGAG00000000700	HNRNPM	97	85.346	Meleagris_gallopavo
ENSCPBG00000017052	-	100	76.396	ENSMAUG00000017476	Hnrnpm	91	77.352	Mesocricetus_auratus
ENSCPBG00000017052	-	100	67.145	ENSMICG00000028503	-	100	67.576	Microcebus_murinus
ENSCPBG00000017052	-	100	76.236	ENSMICG00000002532	-	91	77.512	Microcebus_murinus
ENSCPBG00000017052	-	100	77.352	ENSMOCG00000005769	Hnrnpm	91	77.352	Microtus_ochrogaster
ENSCPBG00000017052	-	100	52.812	ENSMMOG00000019610	hnrnpm	86	54.186	Mola_mola
ENSCPBG00000017052	-	100	78.365	ENSMODG00000003801	-	91	79.327	Monodelphis_domestica
ENSCPBG00000017052	-	99	64.323	ENSMODG00000003473	-	89	66.254	Monodelphis_domestica
ENSCPBG00000017052	-	99	54.882	ENSMALG00000014280	hnrnpm	86	56.545	Monopterus_albus
ENSCPBG00000017052	-	100	76.077	MGP_CAROLIEiJ_G0021413	Hnrnpm	100	75.940	Mus_caroli
ENSCPBG00000017052	-	100	75.758	ENSMUSG00000059208	Hnrnpm	99	75.188	Mus_musculus
ENSCPBG00000017052	-	100	76.077	MGP_PahariEiJ_G0020418	Hnrnpm	91	77.033	Mus_pahari
ENSCPBG00000017052	-	100	75.758	MGP_SPRETEiJ_G0022325	Hnrnpm	100	75.188	Mus_spretus
ENSCPBG00000017052	-	100	70.713	ENSMPUG00000007241	HNRNPM	83	72.079	Mustela_putorius_furo
ENSCPBG00000017052	-	66	70.245	ENSMLUG00000025231	-	85	70.245	Myotis_lucifugus
ENSCPBG00000017052	-	100	71.770	ENSMLUG00000006696	-	88	72.887	Myotis_lucifugus
ENSCPBG00000017052	-	100	76.555	ENSNGAG00000003707	Hnrnpm	91	77.512	Nannospalax_galili
ENSCPBG00000017052	-	99	49.838	ENSNGAG00000017657	-	84	50.000	Nannospalax_galili
ENSCPBG00000017052	-	99	52.331	ENSNBRG00000015999	hnrnpm	95	55.436	Neolamprologus_brichardi
ENSCPBG00000017052	-	100	75.962	ENSMEUG00000004789	HNRNPM	91	75.801	Notamacropus_eugenii
ENSCPBG00000017052	-	94	87.324	ENSOPRG00000001943	HNRNPM	77	87.324	Ochotona_princeps
ENSCPBG00000017052	-	88	66.543	ENSODEG00000011442	-	89	68.030	Octodon_degus
ENSCPBG00000017052	-	100	60.925	ENSODEG00000004347	-	98	61.085	Octodon_degus
ENSCPBG00000017052	-	100	60.064	ENSODEG00000009194	-	89	60.287	Octodon_degus
ENSCPBG00000017052	-	100	75.196	ENSODEG00000010314	-	81	73.529	Octodon_degus
ENSCPBG00000017052	-	99	52.331	ENSONIG00000001758	hnrnpm	96	54.518	Oreochromis_niloticus
ENSCPBG00000017052	-	87	73.856	ENSOANG00000010259	HNRNPM	100	74.074	Ornithorhynchus_anatinus
ENSCPBG00000017052	-	57	63.838	ENSOCUG00000023204	-	99	64.727	Oryctolagus_cuniculus
ENSCPBG00000017052	-	100	69.378	ENSOCUG00000000552	-	88	71.770	Oryctolagus_cuniculus
ENSCPBG00000017052	-	99	54.250	ENSORLG00000005400	hnrnpm	86	53.488	Oryzias_latipes
ENSCPBG00000017052	-	99	53.787	ENSORLG00020022108	hnrnpm	88	53.798	Oryzias_latipes_hni
ENSCPBG00000017052	-	99	53.941	ENSORLG00015019809	hnrnpm	86	53.953	Oryzias_latipes_hsok
ENSCPBG00000017052	-	99	54.849	ENSOMEG00000013075	hnrnpm	84	56.228	Oryzias_melastigma
ENSCPBG00000017052	-	55	62.109	ENSOGAG00000032900	-	60	62.109	Otolemur_garnettii
ENSCPBG00000017052	-	100	71.132	ENSOGAG00000030987	HNRNPM	88	72.727	Otolemur_garnettii
ENSCPBG00000017052	-	100	70.973	ENSOARG00000003961	HNRNPM	90	70.494	Ovis_aries
ENSCPBG00000017052	-	100	76.396	ENSPPAG00000039365	HNRNPM	91	77.671	Pan_paniscus
ENSCPBG00000017052	-	100	76.396	ENSPPRG00000009284	HNRNPM	91	77.671	Panthera_pardus
ENSCPBG00000017052	-	100	73.844	ENSPTIG00000003024	HNRNPM	90	75.120	Panthera_tigris_altaica
ENSCPBG00000017052	-	100	76.396	ENSPTRG00000010424	HNRNPM	91	77.671	Pan_troglodytes
ENSCPBG00000017052	-	100	76.396	ENSPANG00000000283	HNRNPM	91	77.671	Papio_anubis
ENSCPBG00000017052	-	99	56.916	ENSPKIG00000001332	hnrnpm	94	58.320	Paramormyrops_kingsleyae
ENSCPBG00000017052	-	100	87.520	ENSPSIG00000011477	HNRNPM	95	88.960	Pelodiscus_sinensis
ENSCPBG00000017052	-	99	52.061	ENSPMGG00000012793	hnrnpm	87	55.009	Periophthalmus_magnuspinnatus
ENSCPBG00000017052	-	100	76.555	ENSPEMG00000009260	Hnrnpm	91	77.512	Peromyscus_maniculatus_bairdii
ENSCPBG00000017052	-	100	77.280	ENSPCIG00000020115	HNRNPM	100	77.920	Phascolarctos_cinereus
ENSCPBG00000017052	-	99	56.556	ENSPFOG00000013612	hnrnpm	100	53.692	Poecilia_formosa
ENSCPBG00000017052	-	99	51.057	ENSPLAG00000011139	hnrnpm	86	52.527	Poecilia_latipinna
ENSCPBG00000017052	-	99	49.618	ENSPMEG00000011182	hnrnpm	93	52.607	Poecilia_mexicana
ENSCPBG00000017052	-	99	54.276	ENSPREG00000016114	hnrnpm	85	68.421	Poecilia_reticulata
ENSCPBG00000017052	-	100	71.292	ENSPPYG00000009506	HNRNPM	90	72.887	Pongo_abelii
ENSCPBG00000017052	-	100	75.591	ENSPCAG00000009678	HNRNPM	91	75.748	Procavia_capensis
ENSCPBG00000017052	-	100	76.555	ENSPCOG00000020227	HNRNPM	95	74.122	Propithecus_coquereli
ENSCPBG00000017052	-	100	73.381	ENSPVAG00000009647	HNRNPM	90	74.820	Pteropus_vampyrus
ENSCPBG00000017052	-	99	51.077	ENSPNYG00000006542	hnrnpm	96	53.049	Pundamilia_nyererei
ENSCPBG00000017052	-	99	53.365	ENSPNAG00000020740	hnrnpm	86	56.289	Pygocentrus_nattereri
ENSCPBG00000017052	-	100	76.396	ENSRNOG00000007921	Hnrnpm	91	77.352	Rattus_norvegicus
ENSCPBG00000017052	-	100	76.396	ENSRBIG00000041503	HNRNPM	97	74.648	Rhinopithecus_bieti
ENSCPBG00000017052	-	100	67.725	ENSRBIG00000039870	-	88	68.783	Rhinopithecus_bieti
ENSCPBG00000017052	-	100	76.236	ENSRROG00000038240	-	91	77.512	Rhinopithecus_roxellana
ENSCPBG00000017052	-	100	71.611	ENSRROG00000033189	-	96	74.865	Rhinopithecus_roxellana
ENSCPBG00000017052	-	90	67.260	ENSSBOG00000022413	-	99	69.258	Saimiri_boliviensis_boliviensis
ENSCPBG00000017052	-	100	76.715	ENSSBOG00000032416	HNRNPM	91	77.671	Saimiri_boliviensis_boliviensis
ENSCPBG00000017052	-	94	83.621	ENSSHAG00000005864	HNRNPM	99	85.345	Sarcophilus_harrisii
ENSCPBG00000017052	-	99	55.803	ENSSFOG00015008815	hnrnpm	93	59.076	Scleropages_formosus
ENSCPBG00000017052	-	99	53.858	ENSSMAG00000003992	hnrnpm	93	54.476	Scophthalmus_maximus
ENSCPBG00000017052	-	99	59.274	ENSSDUG00000002188	hnrnpm	87	71.613	Seriola_dumerili
ENSCPBG00000017052	-	99	56.303	ENSSLDG00000016713	hnrnpm	93	51.220	Seriola_lalandi_dorsalis
ENSCPBG00000017052	-	79	94.366	ENSSARG00000000267	HNRNPM	63	94.366	Sorex_araneus
ENSCPBG00000017052	-	100	86.430	ENSSPUG00000002270	HNRNPM	86	86.430	Sphenodon_punctatus
ENSCPBG00000017052	-	99	52.432	ENSSPAG00000023132	hnrnpm	95	55.832	Stegastes_partitus
ENSCPBG00000017052	-	100	76.236	ENSSSCG00000013602	HNRNPM	100	77.512	Sus_scrofa
ENSCPBG00000017052	-	100	81.305	ENSTGUG00000000938	HNRNPM	97	80.776	Taeniopygia_guttata
ENSCPBG00000017052	-	99	56.584	ENSTRUG00000013783	hnrnpm	94	59.184	Takifugu_rubripes
ENSCPBG00000017052	-	95	56.771	ENSTNIG00000015530	hnrnpm	99	55.236	Tetraodon_nigroviridis
ENSCPBG00000017052	-	63	93.925	ENSTBEG00000008718	HNRNPM	63	94.608	Tupaia_belangeri
ENSCPBG00000017052	-	100	71.451	ENSTTRG00000009769	HNRNPM	91	72.727	Tursiops_truncatus
ENSCPBG00000017052	-	100	74.653	ENSUAMG00000005710	HNRNPM	100	73.529	Ursus_americanus
ENSCPBG00000017052	-	91	72.807	ENSUMAG00000014575	HNRNPM	97	74.517	Ursus_maritimus
ENSCPBG00000017052	-	99	65.909	ENSVPAG00000004215	HNRNPM	90	66.084	Vicugna_pacos
ENSCPBG00000017052	-	100	71.981	ENSVVUG00000024984	HNRNPM	100	73.529	Vulpes_vulpes
ENSCPBG00000017052	-	100	62.857	ENSXETG00000001777	hnrnpm	97	62.857	Xenopus_tropicalis
ENSCPBG00000017052	-	99	50.992	ENSXCOG00000002651	hnrnpm	88	50.687	Xiphophorus_couchianus
ENSCPBG00000017052	-	99	53.495	ENSXMAG00000018502	hnrnpm	93	53.495	Xiphophorus_maculatus