EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000017148 (Gene tree)
Gene ID: 101938319
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chr3:44203126-44203386
Accession: 21083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024066	SF3b10	PF07189.11	3.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028347	SF3B5-201	261	-	ENSCPBP00000024066	86 (aa)	XP_005280465	UPI00029353E2

Gene Model

Click here to download ENSCPBG00000017148's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017148	SF3B5	100	98.837	ENSG00000169976	SF3B5	100	98.837	Homo_sapiens
ENSCPBG00000017148	SF3B5	100	90.698	ENSAPOG00000001721	sf3b5	100	90.698	Acanthochromis_polyacanthus
ENSCPBG00000017148	SF3B5	100	93.023	ENSACIG00000008106	sf3b5	100	93.023	Amphilophus_citrinellus
ENSCPBG00000017148	SF3B5	100	90.698	ENSAOCG00000023367	sf3b5	100	90.698	Amphiprion_ocellaris
ENSCPBG00000017148	SF3B5	100	90.698	ENSAPEG00000004605	sf3b5	100	90.698	Amphiprion_percula
ENSCPBG00000017148	SF3B5	100	91.860	ENSATEG00000009720	sf3b5	100	91.860	Anabas_testudineus
ENSCPBG00000017148	SF3B5	100	97.674	ENSACAG00000007948	SF3B5	100	97.674	Anolis_carolinensis
ENSCPBG00000017148	SF3B5	100	98.837	ENSANAG00000019999	SF3B5	100	98.837	Aotus_nancymaae
ENSCPBG00000017148	SF3B5	100	93.023	ENSACLG00000022410	sf3b5	100	93.023	Astatotilapia_calliptera
ENSCPBG00000017148	SF3B5	100	98.837	ENSBTAG00000009795	SF3B5	100	98.837	Bos_taurus
ENSCPBG00000017148	SF3B5	100	98.837	ENSCJAG00000046566	SF3B5	100	98.837	Callithrix_jacchus
ENSCPBG00000017148	SF3B5	100	98.837	ENSCAFG00000032495	SF3B5	100	98.837	Canis_familiaris
ENSCPBG00000017148	SF3B5	100	98.837	ENSCAFG00020000873	SF3B5	100	98.837	Canis_lupus_dingo
ENSCPBG00000017148	SF3B5	100	98.837	ENSCHIG00000007987	SF3B5	100	98.837	Capra_hircus
ENSCPBG00000017148	SF3B5	100	98.837	ENSTSYG00000012236	SF3B5	100	98.837	Carlito_syrichta
ENSCPBG00000017148	SF3B5	100	98.837	ENSCPOG00000012435	SF3B5	100	98.837	Cavia_porcellus
ENSCPBG00000017148	SF3B5	100	98.837	ENSCCAG00000006528	SF3B5	100	98.837	Cebus_capucinus
ENSCPBG00000017148	SF3B5	100	98.837	ENSCATG00000010192	SF3B5	100	98.837	Cercocebus_atys
ENSCPBG00000017148	SF3B5	100	98.837	ENSCLAG00000017802	SF3B5	100	98.837	Chinchilla_lanigera
ENSCPBG00000017148	SF3B5	100	98.837	ENSCSAG00000000187	SF3B5	100	98.837	Chlorocebus_sabaeus
ENSCPBG00000017148	SF3B5	97	75.904	ENSCING00000021953	-	97	75.904	Ciona_intestinalis
ENSCPBG00000017148	SF3B5	100	98.837	ENSCANG00000002639	SF3B5	100	98.837	Colobus_angolensis_palliatus
ENSCPBG00000017148	SF3B5	100	97.674	ENSCGRG00001007249	Sf3b5	100	97.674	Cricetulus_griseus_chok1gshd
ENSCPBG00000017148	SF3B5	100	97.674	ENSCGRG00000019185	Sf3b5	100	97.674	Cricetulus_griseus_crigri
ENSCPBG00000017148	SF3B5	100	93.023	ENSCSEG00000003216	sf3b5	100	93.023	Cynoglossus_semilaevis
ENSCPBG00000017148	SF3B5	100	91.860	ENSCVAG00000005040	sf3b5	100	91.860	Cyprinodon_variegatus
ENSCPBG00000017148	SF3B5	100	94.186	ENSDARG00000016855	sf3b5	100	94.186	Danio_rerio
ENSCPBG00000017148	SF3B5	100	98.837	ENSDNOG00000048829	SF3B5	82	98.837	Dasypus_novemcinctus
ENSCPBG00000017148	SF3B5	100	98.837	ENSDORG00000005838	Sf3b5	100	98.837	Dipodomys_ordii
ENSCPBG00000017148	SF3B5	99	83.529	FBgn0040534	Sf3b5	100	83.529	Drosophila_melanogaster
ENSCPBG00000017148	SF3B5	100	98.837	ENSETEG00000004047	SF3B5	100	98.837	Echinops_telfairi
ENSCPBG00000017148	SF3B5	99	82.353	ENSEBUG00000002311	sf3b5	100	82.353	Eptatretus_burgeri
ENSCPBG00000017148	SF3B5	100	98.837	ENSEASG00005009522	SF3B5	100	98.837	Equus_asinus_asinus
ENSCPBG00000017148	SF3B5	100	98.837	ENSECAG00000005457	SF3B5	100	98.837	Equus_caballus
ENSCPBG00000017148	SF3B5	100	90.698	ENSELUG00000014290	SF3B5	100	90.698	Esox_lucius
ENSCPBG00000017148	SF3B5	100	98.837	ENSFCAG00000000936	SF3B5	100	98.837	Felis_catus
ENSCPBG00000017148	SF3B5	100	96.512	ENSFALG00000015012	SF3B5	100	96.512	Ficedula_albicollis
ENSCPBG00000017148	SF3B5	100	98.837	ENSFDAG00000003664	SF3B5	100	98.837	Fukomys_damarensis
ENSCPBG00000017148	SF3B5	100	91.860	ENSFHEG00000020301	sf3b5	100	91.860	Fundulus_heteroclitus
ENSCPBG00000017148	SF3B5	100	91.860	ENSGMOG00000019972	sf3b5	100	91.860	Gadus_morhua
ENSCPBG00000017148	SF3B5	100	98.837	ENSGALG00000030824	SF3B5	100	98.837	Gallus_gallus
ENSCPBG00000017148	SF3B5	100	91.860	ENSGAFG00000000271	sf3b5	100	91.860	Gambusia_affinis
ENSCPBG00000017148	SF3B5	100	91.860	ENSGACG00000010363	sf3b5	100	91.860	Gasterosteus_aculeatus
ENSCPBG00000017148	SF3B5	100	94.186	ENSGAGG00000000646	-	100	94.186	Gopherus_agassizii
ENSCPBG00000017148	SF3B5	100	100.000	ENSGAGG00000011434	SF3B5	100	100.000	Gopherus_agassizii
ENSCPBG00000017148	SF3B5	100	98.837	ENSGGOG00000001537	SF3B5	100	98.837	Gorilla_gorilla
ENSCPBG00000017148	SF3B5	100	93.023	ENSHBUG00000008925	sf3b5	100	93.023	Haplochromis_burtoni
ENSCPBG00000017148	SF3B5	100	98.837	ENSHGLG00000021406	SF3B5	100	98.837	Heterocephalus_glaber_female
ENSCPBG00000017148	SF3B5	100	98.837	ENSHGLG00100020370	SF3B5	100	98.837	Heterocephalus_glaber_male
ENSCPBG00000017148	SF3B5	100	90.698	ENSHCOG00000009115	-	100	90.698	Hippocampus_comes
ENSCPBG00000017148	SF3B5	100	90.698	ENSHCOG00000016806	sf3b5	100	90.698	Hippocampus_comes
ENSCPBG00000017148	SF3B5	100	90.698	ENSHCOG00000016802	sf3b5	100	90.698	Hippocampus_comes
ENSCPBG00000017148	SF3B5	100	94.186	ENSIPUG00000015166	sf3b5	100	94.186	Ictalurus_punctatus
ENSCPBG00000017148	SF3B5	100	98.837	ENSSTOG00000003347	SF3B5	100	98.837	Ictidomys_tridecemlineatus
ENSCPBG00000017148	SF3B5	100	98.837	ENSJJAG00000001857	Sf3b5	100	98.837	Jaculus_jaculus
ENSCPBG00000017148	SF3B5	100	91.860	ENSKMAG00000002249	sf3b5	100	91.860	Kryptolebias_marmoratus
ENSCPBG00000017148	SF3B5	100	91.860	ENSLBEG00000019847	sf3b5	100	91.860	Labrus_bergylta
ENSCPBG00000017148	SF3B5	100	96.512	ENSLACG00000000946	SF3B5	100	96.512	Latimeria_chalumnae
ENSCPBG00000017148	SF3B5	100	93.023	ENSLOCG00000017352	sf3b5	100	93.023	Lepisosteus_oculatus
ENSCPBG00000017148	SF3B5	100	98.837	ENSLAFG00000032489	SF3B5	100	98.837	Loxodonta_africana
ENSCPBG00000017148	SF3B5	100	98.837	ENSMFAG00000029753	SF3B5	100	98.837	Macaca_fascicularis
ENSCPBG00000017148	SF3B5	100	98.837	ENSMMUG00000047691	SF3B5	100	98.837	Macaca_mulatta
ENSCPBG00000017148	SF3B5	100	98.837	ENSMNEG00000028236	SF3B5	100	98.837	Macaca_nemestrina
ENSCPBG00000017148	SF3B5	100	98.837	ENSMLEG00000007622	SF3B5	100	98.837	Mandrillus_leucophaeus
ENSCPBG00000017148	SF3B5	100	93.023	ENSMAMG00000021639	sf3b5	100	93.023	Mastacembelus_armatus
ENSCPBG00000017148	SF3B5	100	93.023	ENSMZEG00005028115	SF3B5	100	93.023	Maylandia_zebra
ENSCPBG00000017148	SF3B5	100	81.395	ENSMZEG00005027407	sf3b5	100	81.395	Maylandia_zebra
ENSCPBG00000017148	SF3B5	100	93.023	ENSMZEG00005027408	sf3b5	100	93.023	Maylandia_zebra
ENSCPBG00000017148	SF3B5	100	98.837	ENSMGAG00000015849	SF3B5	100	98.837	Meleagris_gallopavo
ENSCPBG00000017148	SF3B5	100	97.674	ENSMAUG00000008283	Sf3b5	100	97.674	Mesocricetus_auratus
ENSCPBG00000017148	SF3B5	100	98.837	ENSMICG00000014922	SF3B5	100	98.837	Microcebus_murinus
ENSCPBG00000017148	SF3B5	100	97.674	ENSMOCG00000001713	Sf3b5	100	97.674	Microtus_ochrogaster
ENSCPBG00000017148	SF3B5	100	93.023	ENSMMOG00000007956	sf3b5	100	93.023	Mola_mola
ENSCPBG00000017148	SF3B5	100	98.837	ENSMODG00000023291	SF3B5	83	98.837	Monodelphis_domestica
ENSCPBG00000017148	SF3B5	91	91.358	ENSMALG00000020357	sf3b5	99	91.358	Monopterus_albus
ENSCPBG00000017148	SF3B5	100	97.674	MGP_CAROLIEiJ_G0015120	Sf3b5	100	97.674	Mus_caroli
ENSCPBG00000017148	SF3B5	100	97.674	ENSMUSG00000078348	Sf3b5	100	97.674	Mus_musculus
ENSCPBG00000017148	SF3B5	100	97.674	MGP_PahariEiJ_G0023739	Sf3b5	100	97.674	Mus_pahari
ENSCPBG00000017148	SF3B5	100	97.674	MGP_SPRETEiJ_G0015928	Sf3b5	100	97.674	Mus_spretus
ENSCPBG00000017148	SF3B5	100	98.837	ENSMPUG00000018379	SF3B5	100	98.837	Mustela_putorius_furo
ENSCPBG00000017148	SF3B5	100	94.186	ENSMLUG00000010802	-	100	94.186	Myotis_lucifugus
ENSCPBG00000017148	SF3B5	100	98.837	ENSMLUG00000028504	-	100	98.837	Myotis_lucifugus
ENSCPBG00000017148	SF3B5	93	95.000	ENSMLUG00000025546	-	93	95.000	Myotis_lucifugus
ENSCPBG00000017148	SF3B5	100	98.837	ENSNGAG00000010732	Sf3b5	100	98.837	Nannospalax_galili
ENSCPBG00000017148	SF3B5	100	93.023	ENSNBRG00000014383	sf3b5	100	93.023	Neolamprologus_brichardi
ENSCPBG00000017148	SF3B5	100	98.837	ENSNLEG00000019307	SF3B5	100	98.837	Nomascus_leucogenys
ENSCPBG00000017148	SF3B5	100	98.837	ENSMEUG00000005445	-	100	98.837	Notamacropus_eugenii
ENSCPBG00000017148	SF3B5	100	98.837	ENSMEUG00000005440	-	100	98.837	Notamacropus_eugenii
ENSCPBG00000017148	SF3B5	100	97.674	ENSOPRG00000015107	SF3B5	100	97.674	Ochotona_princeps
ENSCPBG00000017148	SF3B5	100	98.837	ENSODEG00000019507	SF3B5	100	98.837	Octodon_degus
ENSCPBG00000017148	SF3B5	100	93.023	ENSONIG00000020725	sf3b5	100	93.023	Oreochromis_niloticus
ENSCPBG00000017148	SF3B5	69	98.305	ENSOANG00000015301	SF3B5	97	98.305	Ornithorhynchus_anatinus
ENSCPBG00000017148	SF3B5	100	98.837	ENSOCUG00000008752	SF3B5	100	98.837	Oryctolagus_cuniculus
ENSCPBG00000017148	SF3B5	100	94.186	ENSORLG00000004925	sf3b5	100	94.186	Oryzias_latipes
ENSCPBG00000017148	SF3B5	100	94.186	ENSORLG00020011625	sf3b5	100	94.186	Oryzias_latipes_hni
ENSCPBG00000017148	SF3B5	100	94.186	ENSORLG00015017061	sf3b5	100	94.186	Oryzias_latipes_hsok
ENSCPBG00000017148	SF3B5	100	94.186	ENSOMEG00000010620	sf3b5	100	94.186	Oryzias_melastigma
ENSCPBG00000017148	SF3B5	100	98.837	ENSOGAG00000012152	SF3B5	100	98.837	Otolemur_garnettii
ENSCPBG00000017148	SF3B5	100	95.349	ENSOARG00000002617	SF3B5	100	95.349	Ovis_aries
ENSCPBG00000017148	SF3B5	92	98.734	ENSOARG00000019486	-	95	98.734	Ovis_aries
ENSCPBG00000017148	SF3B5	100	98.837	ENSPPAG00000012940	SF3B5	100	98.837	Pan_paniscus
ENSCPBG00000017148	SF3B5	100	98.837	ENSPPRG00000021262	SF3B5	100	98.837	Panthera_pardus
ENSCPBG00000017148	SF3B5	100	98.837	ENSPTIG00000001952	SF3B5	100	98.837	Panthera_tigris_altaica
ENSCPBG00000017148	SF3B5	100	98.837	ENSPTRG00000018676	SF3B5	100	98.837	Pan_troglodytes
ENSCPBG00000017148	SF3B5	100	98.837	ENSPANG00000034242	SF3B5	100	98.837	Papio_anubis
ENSCPBG00000017148	SF3B5	100	93.023	ENSPKIG00000006057	sf3b5	100	93.023	Paramormyrops_kingsleyae
ENSCPBG00000017148	SF3B5	100	100.000	ENSPSIG00000001262	SF3B5	100	100.000	Pelodiscus_sinensis
ENSCPBG00000017148	SF3B5	100	90.698	ENSPMGG00000014804	sf3b5	100	90.698	Periophthalmus_magnuspinnatus
ENSCPBG00000017148	SF3B5	100	97.674	ENSPEMG00000012931	Sf3b5	100	97.674	Peromyscus_maniculatus_bairdii
ENSCPBG00000017148	SF3B5	100	89.535	ENSPMAG00000010296	sf3b5	100	89.535	Petromyzon_marinus
ENSCPBG00000017148	SF3B5	93	100.000	ENSPCIG00000011344	-	78	100.000	Phascolarctos_cinereus
ENSCPBG00000017148	SF3B5	100	77.907	ENSPCIG00000025007	-	100	77.907	Phascolarctos_cinereus
ENSCPBG00000017148	SF3B5	100	91.860	ENSPFOG00000019994	sf3b5	100	91.860	Poecilia_formosa
ENSCPBG00000017148	SF3B5	100	91.860	ENSPLAG00000008412	sf3b5	100	91.860	Poecilia_latipinna
ENSCPBG00000017148	SF3B5	100	91.860	ENSPMEG00000020050	sf3b5	100	91.860	Poecilia_mexicana
ENSCPBG00000017148	SF3B5	100	91.860	ENSPREG00000009242	sf3b5	100	91.860	Poecilia_reticulata
ENSCPBG00000017148	SF3B5	100	98.837	ENSPPYG00000017068	SF3B5	100	98.837	Pongo_abelii
ENSCPBG00000017148	SF3B5	100	98.837	ENSPCAG00000009332	SF3B5	100	98.837	Procavia_capensis
ENSCPBG00000017148	SF3B5	100	98.837	ENSPCOG00000013754	SF3B5	100	98.837	Propithecus_coquereli
ENSCPBG00000017148	SF3B5	56	100.000	ENSPVAG00000002820	SF3B5	100	100.000	Pteropus_vampyrus
ENSCPBG00000017148	SF3B5	100	93.023	ENSPNYG00000002075	sf3b5	100	93.023	Pundamilia_nyererei
ENSCPBG00000017148	SF3B5	100	95.349	ENSPNAG00000004942	sf3b5	100	95.349	Pygocentrus_nattereri
ENSCPBG00000017148	SF3B5	100	97.674	ENSRNOG00000014908	Sf3b5	100	97.674	Rattus_norvegicus
ENSCPBG00000017148	SF3B5	100	98.837	ENSRBIG00000006301	SF3B5	100	98.837	Rhinopithecus_bieti
ENSCPBG00000017148	SF3B5	100	98.837	ENSRROG00000037067	SF3B5	100	98.837	Rhinopithecus_roxellana
ENSCPBG00000017148	SF3B5	100	98.837	ENSSBOG00000006122	SF3B5	100	98.837	Saimiri_boliviensis_boliviensis
ENSCPBG00000017148	SF3B5	100	97.674	ENSSHAG00000015670	SF3B5	100	97.674	Sarcophilus_harrisii
ENSCPBG00000017148	SF3B5	100	94.186	ENSSFOG00015015767	sf3b5	100	94.186	Scleropages_formosus
ENSCPBG00000017148	SF3B5	100	90.698	ENSSMAG00000018852	sf3b5	100	90.698	Scophthalmus_maximus
ENSCPBG00000017148	SF3B5	100	91.860	ENSSDUG00000018161	sf3b5	100	91.860	Seriola_dumerili
ENSCPBG00000017148	SF3B5	100	91.860	ENSSLDG00000014547	sf3b5	100	91.860	Seriola_lalandi_dorsalis
ENSCPBG00000017148	SF3B5	100	98.837	ENSSARG00000007820	SF3B5	100	98.837	Sorex_araneus
ENSCPBG00000017148	SF3B5	100	90.698	ENSSPAG00000017371	-	100	90.698	Stegastes_partitus
ENSCPBG00000017148	SF3B5	100	90.698	ENSSPAG00000009244	sf3b5	100	90.698	Stegastes_partitus
ENSCPBG00000017148	SF3B5	100	98.837	ENSSSCG00000035578	SF3B5	100	98.837	Sus_scrofa
ENSCPBG00000017148	SF3B5	100	98.837	ENSTGUG00000010810	SF3B5	100	98.837	Taeniopygia_guttata
ENSCPBG00000017148	SF3B5	100	91.860	ENSTRUG00000005577	sf3b5	100	91.860	Takifugu_rubripes
ENSCPBG00000017148	SF3B5	100	91.860	ENSTNIG00000001265	sf3b5	100	91.860	Tetraodon_nigroviridis
ENSCPBG00000017148	SF3B5	100	97.674	ENSTBEG00000003072	SF3B5	100	97.674	Tupaia_belangeri
ENSCPBG00000017148	SF3B5	100	98.837	ENSTTRG00000008817	SF3B5	100	98.837	Tursiops_truncatus
ENSCPBG00000017148	SF3B5	100	98.837	ENSUAMG00000027296	SF3B5	100	98.837	Ursus_americanus
ENSCPBG00000017148	SF3B5	100	98.837	ENSUMAG00000005448	SF3B5	100	98.837	Ursus_maritimus
ENSCPBG00000017148	SF3B5	100	98.837	ENSVPAG00000003826	SF3B5	100	98.837	Vicugna_pacos
ENSCPBG00000017148	SF3B5	100	98.837	ENSVVUG00000004703	SF3B5	100	98.837	Vulpes_vulpes
ENSCPBG00000017148	SF3B5	100	96.512	ENSXETG00000021409	sf3b5	100	96.512	Xenopus_tropicalis
ENSCPBG00000017148	SF3B5	100	91.860	ENSXMAG00000019971	sf3b5	100	91.860	Xiphophorus_maculatus