EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017398 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5967 bases
Position: chrKK088246.1:2328063-2334029
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024380	APOBEC_N	PF08210.11	1.4e-29	1	1
ENSCPBP00000024380	APOBEC_C	PF05240.14	5.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028729	-	684	-	ENSCPBP00000024380	227 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000017398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017398	-	74	81.065	ENSCPBG00000014328	-	74	81.065
ENSCPBG00000017398	-	74	91.716	ENSCPBG00000014327	-	64	91.716
ENSCPBG00000017398	-	77	47.753	ENSCPBG00000014335	-	72	47.753
ENSCPBG00000017398	-	76	47.399	ENSCPBG00000014331	-	81	44.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017398	-	82	44.920	ENSG00000111701	APOBEC1	77	44.920	Homo_sapiens
ENSCPBG00000017398	-	82	45.161	ENSAMEG00000007098	APOBEC1	77	45.161	Ailuropoda_melanoleuca
ENSCPBG00000017398	-	76	44.318	ENSACAG00000028578	-	93	44.318	Anolis_carolinensis
ENSCPBG00000017398	-	81	46.237	ENSANAG00000027743	APOBEC1	74	46.237	Aotus_nancymaae
ENSCPBG00000017398	-	82	43.850	ENSBTAG00000014683	APOBEC1	77	43.850	Bos_taurus
ENSCPBG00000017398	-	74	49.112	ENSCJAG00000005398	APOBEC1	75	49.112	Callithrix_jacchus
ENSCPBG00000017398	-	82	44.920	ENSCAFG00000013901	APOBEC1	77	44.920	Canis_familiaris
ENSCPBG00000017398	-	74	48.521	ENSCAFG00020003511	APOBEC1	69	48.521	Canis_lupus_dingo
ENSCPBG00000017398	-	98	38.889	ENSCHIG00000011898	APOBEC1	95	38.889	Capra_hircus
ENSCPBG00000017398	-	52	47.899	ENSTSYG00000029141	APOBEC1	84	47.899	Carlito_syrichta
ENSCPBG00000017398	-	73	46.386	ENSCAPG00000015882	-	76	46.386	Cavia_aperea
ENSCPBG00000017398	-	82	43.548	ENSCPOG00000033068	APOBEC1	77	43.548	Cavia_porcellus
ENSCPBG00000017398	-	81	47.849	ENSCCAG00000022258	APOBEC1	78	47.849	Cebus_capucinus
ENSCPBG00000017398	-	82	45.455	ENSCATG00000021613	APOBEC1	73	45.455	Cercocebus_atys
ENSCPBG00000017398	-	73	46.386	ENSCLAG00000014645	APOBEC1	71	46.386	Chinchilla_lanigera
ENSCPBG00000017398	-	63	47.887	ENSCSAG00000009817	APOBEC1	73	47.887	Chlorocebus_sabaeus
ENSCPBG00000017398	-	71	49.383	ENSCANG00000038359	APOBEC1	70	49.383	Colobus_angolensis_palliatus
ENSCPBG00000017398	-	79	44.693	ENSCGRG00001011130	Apobec1	76	44.693	Cricetulus_griseus_chok1gshd
ENSCPBG00000017398	-	79	44.693	ENSCGRG00000008644	Apobec1	76	44.693	Cricetulus_griseus_crigri
ENSCPBG00000017398	-	82	43.548	ENSDNOG00000010926	APOBEC1	77	43.548	Dasypus_novemcinctus
ENSCPBG00000017398	-	74	43.787	ENSDORG00000023717	Apobec1	78	43.787	Dipodomys_ordii
ENSCPBG00000017398	-	82	46.277	ENSETEG00000004867	APOBEC1	78	46.277	Echinops_telfairi
ENSCPBG00000017398	-	99	40.708	ENSEASG00005015951	APOBEC1	89	40.708	Equus_asinus_asinus
ENSCPBG00000017398	-	74	43.452	ENSECAG00000017163	APOBEC1	83	43.452	Equus_caballus
ENSCPBG00000017398	-	56	43.651	ENSEEUG00000007530	-	59	43.651	Erinaceus_europaeus
ENSCPBG00000017398	-	74	44.379	ENSEEUG00000009112	-	74	44.379	Erinaceus_europaeus
ENSCPBG00000017398	-	82	45.455	ENSFCAG00000009350	APOBEC1	77	45.455	Felis_catus
ENSCPBG00000017398	-	75	46.324	ENSFALG00000007257	-	77	46.324	Ficedula_albicollis
ENSCPBG00000017398	-	70	44.375	ENSFDAG00000018470	APOBEC1	76	44.375	Fukomys_damarensis
ENSCPBG00000017398	-	74	85.799	ENSGAGG00000021744	-	66	85.799	Gopherus_agassizii
ENSCPBG00000017398	-	92	72.381	ENSGAGG00000021745	-	77	73.810	Gopherus_agassizii
ENSCPBG00000017398	-	84	90.000	ENSGAGG00000006624	-	68	90.000	Gopherus_agassizii
ENSCPBG00000017398	-	75	51.744	ENSGAGG00000004947	-	85	51.744	Gopherus_agassizii
ENSCPBG00000017398	-	78	48.413	ENSGAGG00000011837	-	87	49.194	Gopherus_agassizii
ENSCPBG00000017398	-	73	46.988	ENSHGLG00000001495	APOBEC1	69	46.988	Heterocephalus_glaber_female
ENSCPBG00000017398	-	73	46.988	ENSHGLG00100002187	APOBEC1	69	46.988	Heterocephalus_glaber_male
ENSCPBG00000017398	-	57	44.961	ENSSTOG00000021971	APOBEC1	89	45.455	Ictidomys_tridecemlineatus
ENSCPBG00000017398	-	82	44.681	ENSJJAG00000022108	Apobec1	79	44.681	Jaculus_jaculus
ENSCPBG00000017398	-	88	39.810	ENSLAFG00000030837	APOBEC1	93	39.810	Loxodonta_africana
ENSCPBG00000017398	-	82	45.455	ENSMFAG00000000277	APOBEC1	77	45.455	Macaca_fascicularis
ENSCPBG00000017398	-	82	45.455	ENSMNEG00000029670	APOBEC1	77	45.455	Macaca_nemestrina
ENSCPBG00000017398	-	82	45.455	ENSMLEG00000036301	APOBEC1	77	45.455	Mandrillus_leucophaeus
ENSCPBG00000017398	-	78	44.633	ENSMAUG00000022167	Apobec1	77	44.633	Mesocricetus_auratus
ENSCPBG00000017398	-	82	44.385	ENSMICG00000043645	APOBEC1	77	44.385	Microcebus_murinus
ENSCPBG00000017398	-	77	45.304	ENSMODG00000018004	APOBEC1	75	45.304	Monodelphis_domestica
ENSCPBG00000017398	-	79	43.017	ENSMUSG00000040613	Apobec1	89	40.179	Mus_musculus
ENSCPBG00000017398	-	79	43.575	MGP_PahariEiJ_G0022580	-	89	41.071	Mus_pahari
ENSCPBG00000017398	-	79	43.017	MGP_SPRETEiJ_G0029857	Apobec1	89	40.179	Mus_spretus
ENSCPBG00000017398	-	82	44.920	ENSMPUG00000017532	APOBEC1	77	44.920	Mustela_putorius_furo
ENSCPBG00000017398	-	82	44.920	ENSNGAG00000022607	Apobec1	79	44.920	Nannospalax_galili
ENSCPBG00000017398	-	82	45.455	ENSNLEG00000005342	APOBEC1	77	45.455	Nomascus_leucogenys
ENSCPBG00000017398	-	88	41.709	ENSMEUG00000013406	APOBEC1	82	41.709	Notamacropus_eugenii
ENSCPBG00000017398	-	73	42.169	ENSOPRG00000009508	-	90	42.169	Ochotona_princeps
ENSCPBG00000017398	-	95	38.696	ENSOCUG00000025736	APOBEC1	84	38.696	Oryctolagus_cuniculus
ENSCPBG00000017398	-	82	44.624	ENSOGAG00000026415	APOBEC1	77	44.624	Otolemur_garnettii
ENSCPBG00000017398	-	99	39.149	ENSOARG00000002072	APOBEC1	96	39.149	Ovis_aries
ENSCPBG00000017398	-	82	42.473	ENSPPAG00000027657	APOBEC1	75	42.473	Pan_paniscus
ENSCPBG00000017398	-	82	45.455	ENSPPRG00000012182	APOBEC1	77	45.455	Panthera_pardus
ENSCPBG00000017398	-	82	45.455	ENSPTIG00000020280	APOBEC1	77	45.455	Panthera_tigris_altaica
ENSCPBG00000017398	-	82	44.920	ENSPTRG00000004614	APOBEC1	77	44.920	Pan_troglodytes
ENSCPBG00000017398	-	82	45.455	ENSPANG00000021027	APOBEC1	77	45.455	Papio_anubis
ENSCPBG00000017398	-	57	78.431	ENSPSIG00000012791	-	70	78.431	Pelodiscus_sinensis
ENSCPBG00000017398	-	96	73.182	ENSPSIG00000012568	-	95	73.182	Pelodiscus_sinensis
ENSCPBG00000017398	-	79	46.927	ENSPEMG00000023841	Apobec1	76	46.927	Peromyscus_maniculatus_bairdii
ENSCPBG00000017398	-	82	42.781	ENSPCIG00000023973	APOBEC1	77	42.781	Phascolarctos_cinereus
ENSCPBG00000017398	-	82	45.455	ENSPPYG00000004228	APOBEC1	73	45.455	Pongo_abelii
ENSCPBG00000017398	-	82	43.850	ENSPCAG00000008733	APOBEC1	97	43.850	Procavia_capensis
ENSCPBG00000017398	-	74	47.929	ENSPCOG00000013957	APOBEC1	73	47.929	Propithecus_coquereli
ENSCPBG00000017398	-	63	41.667	ENSPVAG00000010709	APOBEC1	60	41.667	Pteropus_vampyrus
ENSCPBG00000017398	-	79	42.458	ENSRNOG00000015411	Apobec1	76	42.458	Rattus_norvegicus
ENSCPBG00000017398	-	82	45.455	ENSRBIG00000031161	APOBEC1	77	45.455	Rhinopithecus_bieti
ENSCPBG00000017398	-	82	45.455	ENSRROG00000033576	APOBEC1	77	45.455	Rhinopithecus_roxellana
ENSCPBG00000017398	-	74	48.521	ENSSBOG00000030587	APOBEC1	94	48.521	Saimiri_boliviensis_boliviensis
ENSCPBG00000017398	-	79	45.556	ENSSHAG00000008925	APOBEC1	77	45.556	Sarcophilus_harrisii
ENSCPBG00000017398	-	74	45.833	ENSSARG00000000032	-	96	45.833	Sorex_araneus
ENSCPBG00000017398	-	57	48.837	ENSSARG00000011972	-	96	48.837	Sorex_araneus
ENSCPBG00000017398	-	74	44.706	ENSSPUG00000009044	-	65	44.706	Sphenodon_punctatus
ENSCPBG00000017398	-	82	43.316	ENSSSCG00000000668	APOBEC1	77	43.316	Sus_scrofa
ENSCPBG00000017398	-	60	46.324	ENSTGUG00000013118	-	93	46.324	Taeniopygia_guttata
ENSCPBG00000017398	-	89	42.857	ENSTBEG00000010043	APOBEC1	81	42.857	Tupaia_belangeri
ENSCPBG00000017398	-	82	43.850	ENSTTRG00000014015	APOBEC1	97	43.850	Tursiops_truncatus
ENSCPBG00000017398	-	82	45.161	ENSUAMG00000011636	APOBEC1	74	45.161	Ursus_americanus
ENSCPBG00000017398	-	82	45.161	ENSUMAG00000016552	APOBEC1	74	45.161	Ursus_maritimus
ENSCPBG00000017398	-	82	41.398	ENSVPAG00000001343	APOBEC1	77	41.398	Vicugna_pacos
ENSCPBG00000017398	-	82	45.989	ENSVVUG00000010522	APOBEC1	77	45.989	Vulpes_vulpes