EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017480 (Gene tree)
Gene ID: 101930871
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 107466 bases
Position: chrKK083091.1:798680-906145
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024502	La	PF05383.17	8.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028870	LARP1B-201	4272	-	ENSCPBP00000024502	1043 (aa)	XP_005282813	UPI00038915DB

Gene Model

Click here to download ENSCPBG00000017480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017480	LARP1B	90	63.494	ENSCPBG00000002173	LARP1	90	63.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017480	LARP1B	93	73.447	ENSG00000138709	LARP1B	96	83.333	Homo_sapiens
ENSCPBG00000017480	LARP1B	89	56.544	ENSAPOG00000020101	larp1b	89	55.334	Acanthochromis_polyacanthus
ENSCPBG00000017480	LARP1B	52	77.617	ENSAMEG00000002748	LARP1B	99	77.617	Ailuropoda_melanoleuca
ENSCPBG00000017480	LARP1B	89	54.527	ENSACIG00000023890	larp1b	90	53.801	Amphilophus_citrinellus
ENSCPBG00000017480	LARP1B	82	53.795	ENSAOCG00000014268	larp1b	90	54.139	Amphiprion_ocellaris
ENSCPBG00000017480	LARP1B	90	57.288	ENSAPEG00000004126	larp1b	88	56.105	Amphiprion_percula
ENSCPBG00000017480	LARP1B	92	56.700	ENSATEG00000017849	larp1b	90	56.900	Anabas_testudineus
ENSCPBG00000017480	LARP1B	85	75.272	ENSAPLG00000010129	LARP1B	100	74.373	Anas_platyrhynchos
ENSCPBG00000017480	LARP1B	86	81.311	ENSACAG00000011338	LARP1B	94	81.639	Anolis_carolinensis
ENSCPBG00000017480	LARP1B	86	61.967	ENSANAG00000034618	LARP1B	99	69.764	Aotus_nancymaae
ENSCPBG00000017480	LARP1B	91	55.110	ENSACLG00000011948	larp1b	91	54.439	Astatotilapia_calliptera
ENSCPBG00000017480	LARP1B	70	57.687	ENSAMXG00000006805	larp1b	86	52.165	Astyanax_mexicanus
ENSCPBG00000017480	LARP1B	93	75.510	ENSBTAG00000012135	LARP1B	98	74.081	Bos_taurus
ENSCPBG00000017480	LARP1B	86	77.741	ENSCJAG00000003338	LARP1B	99	79.905	Callithrix_jacchus
ENSCPBG00000017480	LARP1B	87	78.804	ENSCAFG00000003831	LARP1B	99	78.370	Canis_familiaris
ENSCPBG00000017480	LARP1B	87	77.790	ENSCAFG00020018899	LARP1B	99	77.361	Canis_lupus_dingo
ENSCPBG00000017480	LARP1B	87	76.344	ENSCHIG00000023144	LARP1B	99	74.946	Capra_hircus
ENSCPBG00000017480	LARP1B	86	76.965	ENSCCAG00000021948	LARP1B	99	76.747	Cebus_capucinus
ENSCPBG00000017480	LARP1B	86	76.477	ENSCATG00000013541	LARP1B	99	76.258	Cercocebus_atys
ENSCPBG00000017480	LARP1B	86	77.317	ENSCSAG00000003582	LARP1B	99	77.099	Chlorocebus_sabaeus
ENSCPBG00000017480	LARP1B	86	70.435	ENSCHOG00000005354	LARP1B	99	70.000	Choloepus_hoffmanni
ENSCPBG00000017480	LARP1B	86	73.593	ENSCANG00000026958	LARP1B	99	73.478	Colobus_angolensis_palliatus
ENSCPBG00000017480	LARP1B	89	53.862	ENSCSEG00000013519	larp1b	89	53.777	Cynoglossus_semilaevis
ENSCPBG00000017480	LARP1B	90	55.511	ENSCVAG00000005046	larp1b	91	53.996	Cyprinodon_variegatus
ENSCPBG00000017480	LARP1B	95	52.437	ENSDARG00000061169	larp1b	88	54.183	Danio_rerio
ENSCPBG00000017480	LARP1B	76	70.445	ENSETEG00000012497	LARP1B	89	70.875	Echinops_telfairi
ENSCPBG00000017480	LARP1B	89	49.950	ENSEBUG00000003668	larp1b	95	50.249	Eptatretus_burgeri
ENSCPBG00000017480	LARP1B	87	75.940	ENSEASG00005018106	LARP1B	98	77.749	Equus_asinus_asinus
ENSCPBG00000017480	LARP1B	93	75.102	ENSECAG00000001088	LARP1B	91	73.111	Equus_caballus
ENSCPBG00000017480	LARP1B	58	57.188	ENSELUG00000023774	larp1b	88	47.012	Esox_lucius
ENSCPBG00000017480	LARP1B	87	75.188	ENSFALG00000008098	LARP1B	99	74.516	Ficedula_albicollis
ENSCPBG00000017480	LARP1B	90	56.743	ENSFHEG00000010264	larp1b	85	56.250	Fundulus_heteroclitus
ENSCPBG00000017480	LARP1B	78	65.517	ENSGMOG00000005207	larp1b	79	66.316	Gadus_morhua
ENSCPBG00000017480	LARP1B	99	71.020	ENSGALG00000010207	LARP1B	99	70.734	Gallus_gallus
ENSCPBG00000017480	LARP1B	75	63.107	ENSGAFG00000012012	larp1b	91	60.482	Gambusia_affinis
ENSCPBG00000017480	LARP1B	95	51.495	ENSGACG00000004609	larp1b	93	52.363	Gasterosteus_aculeatus
ENSCPBG00000017480	LARP1B	100	95.905	ENSGAGG00000017209	LARP1B	99	95.905	Gopherus_agassizii
ENSCPBG00000017480	LARP1B	86	76.831	ENSGGOG00000015900	LARP1B	99	76.612	Gorilla_gorilla
ENSCPBG00000017480	LARP1B	89	55.578	ENSHBUG00000009730	larp1b	90	54.518	Haplochromis_burtoni
ENSCPBG00000017480	LARP1B	67	59.972	ENSHCOG00000000918	larp1b	99	60.280	Hippocampus_comes
ENSCPBG00000017480	LARP1B	91	55.215	ENSIPUG00000012138	larp1b	89	54.581	Ictalurus_punctatus
ENSCPBG00000017480	LARP1B	95	52.642	ENSKMAG00000011589	larp1b	97	52.358	Kryptolebias_marmoratus
ENSCPBG00000017480	LARP1B	90	56.354	ENSLBEG00000005655	larp1b	89	56.068	Labrus_bergylta
ENSCPBG00000017480	LARP1B	92	72.680	ENSLACG00000015247	LARP1B	99	74.103	Latimeria_chalumnae
ENSCPBG00000017480	LARP1B	88	66.008	ENSLOCG00000010684	larp1b	96	67.568	Lepisosteus_oculatus
ENSCPBG00000017480	LARP1B	86	77.790	ENSMFAG00000002218	LARP1B	99	77.571	Macaca_fascicularis
ENSCPBG00000017480	LARP1B	86	77.790	ENSMMUG00000021347	LARP1B	99	77.571	Macaca_mulatta
ENSCPBG00000017480	LARP1B	80	75.337	ENSMNEG00000030406	LARP1B	99	75.067	Macaca_nemestrina
ENSCPBG00000017480	LARP1B	86	74.242	ENSMLEG00000009306	LARP1B	99	75.274	Mandrillus_leucophaeus
ENSCPBG00000017480	LARP1B	90	57.359	ENSMAMG00000000081	larp1b	90	57.258	Mastacembelus_armatus
ENSCPBG00000017480	LARP1B	67	62.074	ENSMZEG00005002545	larp1b	98	60.737	Maylandia_zebra
ENSCPBG00000017480	LARP1B	84	66.739	ENSMGAG00000004809	LARP1B	100	66.450	Meleagris_gallopavo
ENSCPBG00000017480	LARP1B	86	80.066	ENSMICG00000036111	LARP1B	99	79.736	Microcebus_murinus
ENSCPBG00000017480	LARP1B	93	78.384	ENSMODG00000012300	LARP1B	92	77.810	Monodelphis_domestica
ENSCPBG00000017480	LARP1B	89	56.813	ENSMALG00000003638	larp1b	87	56.782	Monopterus_albus
ENSCPBG00000017480	LARP1B	92	76.860	ENSMPUG00000017365	LARP1B	88	76.041	Mustela_putorius_furo
ENSCPBG00000017480	LARP1B	85	74.838	ENSMLUG00000010229	LARP1B	99	74.459	Myotis_lucifugus
ENSCPBG00000017480	LARP1B	74	57.955	ENSNBRG00000023846	larp1b	88	56.604	Neolamprologus_brichardi
ENSCPBG00000017480	LARP1B	86	76.528	ENSNLEG00000013819	LARP1B	99	76.310	Nomascus_leucogenys
ENSCPBG00000017480	LARP1B	75	78.623	ENSMEUG00000010308	LARP1B	85	78.192	Notamacropus_eugenii
ENSCPBG00000017480	LARP1B	79	67.221	ENSOPRG00000005478	LARP1B	91	67.221	Ochotona_princeps
ENSCPBG00000017480	LARP1B	89	55.951	ENSONIG00000012386	larp1b	99	55.646	Oreochromis_niloticus
ENSCPBG00000017480	LARP1B	87	76.957	ENSOCUG00000013330	LARP1B	99	75.652	Oryctolagus_cuniculus
ENSCPBG00000017480	LARP1B	92	53.600	ENSORLG00000017954	larp1b	89	53.685	Oryzias_latipes
ENSCPBG00000017480	LARP1B	92	53.493	ENSORLG00020013081	larp1b	87	54.268	Oryzias_latipes_hni
ENSCPBG00000017480	LARP1B	92	54.700	ENSORLG00015009580	larp1b	87	55.637	Oryzias_latipes_hsok
ENSCPBG00000017480	LARP1B	91	54.555	ENSOMEG00000004210	larp1b	88	54.960	Oryzias_melastigma
ENSCPBG00000017480	LARP1B	84	78.676	ENSOGAG00000005771	LARP1B	100	78.339	Otolemur_garnettii
ENSCPBG00000017480	LARP1B	86	76.118	ENSOARG00000015300	LARP1B	99	74.700	Ovis_aries
ENSCPBG00000017480	LARP1B	86	76.612	ENSPPAG00000030439	LARP1B	99	76.393	Pan_paniscus
ENSCPBG00000017480	LARP1B	86	76.393	ENSPTRG00000016437	LARP1B	99	76.175	Pan_troglodytes
ENSCPBG00000017480	LARP1B	86	77.790	ENSPANG00000012488	LARP1B	99	77.571	Papio_anubis
ENSCPBG00000017480	LARP1B	87	51.784	ENSPKIG00000014360	larp1b	93	51.852	Paramormyrops_kingsleyae
ENSCPBG00000017480	LARP1B	89	91.309	ENSPSIG00000012885	LARP1B	99	89.914	Pelodiscus_sinensis
ENSCPBG00000017480	LARP1B	65	63.450	ENSPMGG00000007207	larp1b	81	62.811	Periophthalmus_magnuspinnatus
ENSCPBG00000017480	LARP1B	62	60.519	ENSPMAG00000002700	larp1b	97	54.083	Petromyzon_marinus
ENSCPBG00000017480	LARP1B	88	81.615	ENSPCIG00000026516	LARP1B	99	84.615	Phascolarctos_cinereus
ENSCPBG00000017480	LARP1B	92	54.678	ENSPFOG00000019519	larp1b	88	55.765	Poecilia_formosa
ENSCPBG00000017480	LARP1B	55	49.593	ENSPFOG00000022837	-	87	49.919	Poecilia_formosa
ENSCPBG00000017480	LARP1B	92	55.788	ENSPLAG00000007115	larp1b	87	56.823	Poecilia_latipinna
ENSCPBG00000017480	LARP1B	92	55.487	ENSPMEG00000001224	larp1b	87	56.545	Poecilia_mexicana
ENSCPBG00000017480	LARP1B	86	74.510	ENSPCAG00000007546	LARP1B	99	74.292	Procavia_capensis
ENSCPBG00000017480	LARP1B	77	78.125	ENSPCOG00000021874	LARP1B	99	78.027	Propithecus_coquereli
ENSCPBG00000017480	LARP1B	86	73.128	ENSPVAG00000005373	LARP1B	99	72.797	Pteropus_vampyrus
ENSCPBG00000017480	LARP1B	67	62.376	ENSPNYG00000017357	larp1b	98	60.380	Pundamilia_nyererei
ENSCPBG00000017480	LARP1B	70	62.202	ENSPNAG00000008823	larp1b	82	57.111	Pygocentrus_nattereri
ENSCPBG00000017480	LARP1B	86	77.790	ENSRROG00000030771	LARP1B	99	77.571	Rhinopithecus_roxellana
ENSCPBG00000017480	LARP1B	62	83.185	ENSSHAG00000014474	LARP1B	99	82.960	Sarcophilus_harrisii
ENSCPBG00000017480	LARP1B	85	56.030	ENSSMAG00000006347	larp1b	93	55.415	Scophthalmus_maximus
ENSCPBG00000017480	LARP1B	89	57.384	ENSSDUG00000004182	larp1b	90	55.399	Seriola_dumerili
ENSCPBG00000017480	LARP1B	76	61.528	ENSSLDG00000014613	larp1b	80	59.972	Seriola_lalandi_dorsalis
ENSCPBG00000017480	LARP1B	85	74.241	ENSSPUG00000011837	LARP1B	98	72.457	Sphenodon_punctatus
ENSCPBG00000017480	LARP1B	90	55.488	ENSSPAG00000017772	larp1b	88	55.791	Stegastes_partitus
ENSCPBG00000017480	LARP1B	93	75.077	ENSSSCG00000034280	LARP1B	99	89.583	Sus_scrofa
ENSCPBG00000017480	LARP1B	80	76.076	ENSTGUG00000002098	-	99	70.309	Taeniopygia_guttata
ENSCPBG00000017480	LARP1B	90	55.250	ENSTRUG00000005612	larp1b	88	54.582	Takifugu_rubripes
ENSCPBG00000017480	LARP1B	89	54.793	ENSTNIG00000012398	larp1b	99	54.555	Tetraodon_nigroviridis
ENSCPBG00000017480	LARP1B	72	68.468	ENSTBEG00000004177	LARP1B	88	66.379	Tupaia_belangeri
ENSCPBG00000017480	LARP1B	79	75.207	ENSTTRG00000012984	LARP1B	92	74.734	Tursiops_truncatus
ENSCPBG00000017480	LARP1B	87	78.455	ENSUMAG00000007373	LARP1B	99	78.020	Ursus_maritimus
ENSCPBG00000017480	LARP1B	86	66.557	ENSVPAG00000007223	LARP1B	99	66.338	Vicugna_pacos
ENSCPBG00000017480	LARP1B	87	78.804	ENSVVUG00000011307	LARP1B	99	79.422	Vulpes_vulpes
ENSCPBG00000017480	LARP1B	90	59.143	ENSXETG00000022512	larp1b	92	60.042	Xenopus_tropicalis
ENSCPBG00000017480	LARP1B	72	56.992	ENSXCOG00000004435	larp1b	76	57.520	Xiphophorus_couchianus
ENSCPBG00000017480	LARP1B	92	55.060	ENSXMAG00000008150	larp1b	89	55.556	Xiphophorus_maculatus