EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017489 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 124293 bases
Position: chrKK083247.1:38294-162586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	1	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	2	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	3	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	4	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	5	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	6	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	7	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	8	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	9	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	10	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	11	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	12	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	13	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	14	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	15	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	16	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	17	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	18	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	19	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	20	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	21	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	22	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	23	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	24	25
ENSCPBP00000024522	zf-C2H2	PF00096.26	1.3e-151	25	25
ENSCPBP00000024522	zf-met	PF12874.7	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028890	-	2661	-	ENSCPBP00000024522	886 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000017489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017489	-	97	69.620	ENSCPBG00000026433	-	70	69.620
ENSCPBG00000017489	-	97	34.335	ENSCPBG00000024735	PRDM5	73	34.437
ENSCPBG00000017489	-	99	66.109	ENSCPBG00000016841	-	99	66.883
ENSCPBG00000017489	-	97	50.769	ENSCPBG00000009849	-	85	50.769
ENSCPBG00000017489	-	99	66.667	ENSCPBG00000001181	-	99	58.706
ENSCPBG00000017489	-	100	66.504	ENSCPBG00000001272	-	85	76.344
ENSCPBG00000017489	-	95	34.944	ENSCPBG00000004542	ZNF865	79	34.195
ENSCPBG00000017489	-	99	70.696	ENSCPBG00000021487	-	80	70.696
ENSCPBG00000017489	-	99	47.345	ENSCPBG00000008580	-	85	47.345
ENSCPBG00000017489	-	97	67.460	ENSCPBG00000003130	-	98	67.460
ENSCPBG00000017489	-	94	38.889	ENSCPBG00000003495	ZNF236	84	35.526
ENSCPBG00000017489	-	98	65.723	ENSCPBG00000015500	-	96	64.918
ENSCPBG00000017489	-	100	71.237	ENSCPBG00000017494	-	89	68.502
ENSCPBG00000017489	-	99	65.385	ENSCPBG00000001421	-	98	65.969
ENSCPBG00000017489	-	99	63.287	ENSCPBG00000012976	-	94	57.118
ENSCPBG00000017489	-	100	69.600	ENSCPBG00000003774	-	95	66.250
ENSCPBG00000017489	-	88	49.749	ENSCPBG00000005715	ZBTB49	60	49.749
ENSCPBG00000017489	-	94	64.035	ENSCPBG00000001258	-	98	64.035
ENSCPBG00000017489	-	98	51.546	ENSCPBG00000016039	MYNN	51	51.546
ENSCPBG00000017489	-	99	53.623	ENSCPBG00000009609	-	93	48.586
ENSCPBG00000017489	-	97	65.436	ENSCPBG00000004990	-	100	66.906
ENSCPBG00000017489	-	94	55.263	ENSCPBG00000002063	-	75	55.263
ENSCPBG00000017489	-	95	56.164	ENSCPBG00000002014	-	67	52.632
ENSCPBG00000017489	-	99	65.046	ENSCPBG00000004030	-	88	66.269
ENSCPBG00000017489	-	89	72.862	ENSCPBG00000005703	-	56	72.862
ENSCPBG00000017489	-	97	37.372	ENSCPBG00000026947	ZNF319	93	37.372
ENSCPBG00000017489	-	95	43.813	ENSCPBG00000013652	-	71	43.813
ENSCPBG00000017489	-	98	63.309	ENSCPBG00000021479	-	94	63.309
ENSCPBG00000017489	-	98	61.280	ENSCPBG00000002430	-	80	60.062
ENSCPBG00000017489	-	94	32.780	ENSCPBG00000023857	ZNF770	99	31.429
ENSCPBG00000017489	-	95	50.685	ENSCPBG00000001526	-	84	50.685
ENSCPBG00000017489	-	95	43.750	ENSCPBG00000023418	-	65	43.750
ENSCPBG00000017489	-	95	50.658	ENSCPBG00000005586	-	71	50.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017489	-	95	47.820	ENSG00000198482	ZNF808	97	47.503	Homo_sapiens
ENSCPBG00000017489	-	94	55.131	ENSAMEG00000014454	-	100	50.392	Ailuropoda_melanoleuca
ENSCPBG00000017489	-	94	50.000	ENSACIG00000015429	-	91	50.000	Amphilophus_citrinellus
ENSCPBG00000017489	-	100	56.322	ENSACAG00000029487	-	91	56.322	Anolis_carolinensis
ENSCPBG00000017489	-	99	47.923	ENSACAG00000025611	-	72	46.403	Anolis_carolinensis
ENSCPBG00000017489	-	97	49.936	ENSACAG00000013039	-	99	49.936	Anolis_carolinensis
ENSCPBG00000017489	-	99	56.566	ENSACLG00000019318	-	96	56.566	Astatotilapia_calliptera
ENSCPBG00000017489	-	99	53.819	ENSACLG00000017576	-	88	56.089	Astatotilapia_calliptera
ENSCPBG00000017489	-	94	53.298	ENSAMXG00000009563	-	94	52.489	Astyanax_mexicanus
ENSCPBG00000017489	-	95	55.668	ENSAMXG00000030530	-	97	55.914	Astyanax_mexicanus
ENSCPBG00000017489	-	94	54.756	ENSAMXG00000031496	-	94	54.005	Astyanax_mexicanus
ENSCPBG00000017489	-	94	59.732	ENSAMXG00000018161	-	97	59.732	Astyanax_mexicanus
ENSCPBG00000017489	-	91	51.121	ENSAMXG00000012604	-	96	50.641	Astyanax_mexicanus
ENSCPBG00000017489	-	94	57.345	ENSAMXG00000029828	-	97	57.345	Astyanax_mexicanus
ENSCPBG00000017489	-	94	51.389	ENSAMXG00000037717	-	94	51.389	Astyanax_mexicanus
ENSCPBG00000017489	-	95	57.854	ENSAMXG00000025965	-	96	57.854	Astyanax_mexicanus
ENSCPBG00000017489	-	95	59.100	ENSAMXG00000031900	-	98	59.100	Astyanax_mexicanus
ENSCPBG00000017489	-	94	61.682	ENSAMXG00000041861	-	90	61.682	Astyanax_mexicanus
ENSCPBG00000017489	-	97	63.673	ENSAMXG00000042938	-	90	63.673	Astyanax_mexicanus
ENSCPBG00000017489	-	94	62.195	ENSAMXG00000041721	-	66	62.195	Astyanax_mexicanus
ENSCPBG00000017489	-	93	59.942	ENSAMXG00000033500	-	95	59.942	Astyanax_mexicanus
ENSCPBG00000017489	-	95	58.974	ENSAMXG00000036762	-	99	57.313	Astyanax_mexicanus
ENSCPBG00000017489	-	97	55.367	ENSAMXG00000038280	-	93	55.367	Astyanax_mexicanus
ENSCPBG00000017489	-	94	56.731	ENSBTAG00000050322	-	71	56.731	Bos_taurus
ENSCPBG00000017489	-	96	52.941	ENSBTAG00000030470	-	92	52.941	Bos_taurus
ENSCPBG00000017489	-	94	47.646	ENSCHIG00000020931	-	89	48.387	Capra_hircus
ENSCPBG00000017489	-	95	49.301	ENSCATG00000036940	ZNF808	81	48.142	Cercocebus_atys
ENSCPBG00000017489	-	94	47.574	ENSCSAG00000001974	ZNF808	86	46.703	Chlorocebus_sabaeus
ENSCPBG00000017489	-	95	37.748	ENSCING00000024509	-	98	37.700	Ciona_intestinalis
ENSCPBG00000017489	-	94	46.538	ENSCSAVG00000000649	-	99	45.178	Ciona_savignyi
ENSCPBG00000017489	-	95	51.656	ENSCSAVG00000000642	-	100	51.656	Ciona_savignyi
ENSCPBG00000017489	-	94	44.748	ENSCSAVG00000009583	-	100	45.396	Ciona_savignyi
ENSCPBG00000017489	-	94	49.096	ENSCANG00000019002	ZNF808	79	49.096	Colobus_angolensis_palliatus
ENSCPBG00000017489	-	94	47.024	ENSCGRG00001012523	-	99	47.024	Cricetulus_griseus_chok1gshd
ENSCPBG00000017489	-	95	48.866	ENSCGRG00001011966	Zfp715	71	48.866	Cricetulus_griseus_chok1gshd
ENSCPBG00000017489	-	95	48.866	ENSCGRG00000013626	Zfp715	68	48.866	Cricetulus_griseus_crigri
ENSCPBG00000017489	-	90	52.313	ENSEBUG00000006987	-	99	52.313	Eptatretus_burgeri
ENSCPBG00000017489	-	97	44.129	ENSEBUG00000009909	-	81	43.163	Eptatretus_burgeri
ENSCPBG00000017489	-	97	50.222	ENSEBUG00000006249	-	92	50.222	Eptatretus_burgeri
ENSCPBG00000017489	-	94	47.162	ENSEBUG00000014542	-	70	48.052	Eptatretus_burgeri
ENSCPBG00000017489	-	94	49.286	ENSEBUG00000005012	-	76	49.286	Eptatretus_burgeri
ENSCPBG00000017489	-	94	50.408	ENSEBUG00000001972	-	71	50.408	Eptatretus_burgeri
ENSCPBG00000017489	-	94	50.612	ENSEBUG00000003455	-	83	50.612	Eptatretus_burgeri
ENSCPBG00000017489	-	95	48.110	ENSEBUG00000003078	-	73	48.110	Eptatretus_burgeri
ENSCPBG00000017489	-	94	40.472	ENSEBUG00000006129	-	84	41.905	Eptatretus_burgeri
ENSCPBG00000017489	-	95	49.802	ENSEBUG00000014597	-	83	46.785	Eptatretus_burgeri
ENSCPBG00000017489	-	94	59.195	ENSEBUG00000008903	-	94	59.195	Eptatretus_burgeri
ENSCPBG00000017489	-	95	52.809	ENSEBUG00000010472	-	82	47.485	Eptatretus_burgeri
ENSCPBG00000017489	-	91	49.082	ENSEBUG00000014648	-	75	50.484	Eptatretus_burgeri
ENSCPBG00000017489	-	98	52.878	ENSEBUG00000005703	-	96	52.878	Eptatretus_burgeri
ENSCPBG00000017489	-	92	40.157	ENSGAFG00000017066	-	64	40.827	Gambusia_affinis
ENSCPBG00000017489	-	100	63.836	ENSGAGG00000001469	-	100	63.836	Gopherus_agassizii
ENSCPBG00000017489	-	92	46.667	ENSGAGG00000017094	-	52	46.667	Gopherus_agassizii
ENSCPBG00000017489	-	98	73.226	ENSGAGG00000002828	-	80	73.226	Gopherus_agassizii
ENSCPBG00000017489	-	99	66.978	ENSGAGG00000006323	-	96	68.285	Gopherus_agassizii
ENSCPBG00000017489	-	98	60.763	ENSGAGG00000014389	-	99	60.763	Gopherus_agassizii
ENSCPBG00000017489	-	95	49.031	ENSGGOG00000003352	ZNF808	90	47.020	Gorilla_gorilla
ENSCPBG00000017489	-	99	52.536	ENSHBUG00000001075	-	97	53.000	Haplochromis_burtoni
ENSCPBG00000017489	-	94	48.319	ENSLACG00000014708	-	68	47.895	Latimeria_chalumnae
ENSCPBG00000017489	-	95	49.476	ENSMFAG00000007422	ZNF808	82	48.311	Macaca_fascicularis
ENSCPBG00000017489	-	98	49.476	ENSMMUG00000012083	ZNF808	82	48.311	Macaca_mulatta
ENSCPBG00000017489	-	98	49.476	ENSMNEG00000043562	ZNF808	82	48.311	Macaca_nemestrina
ENSCPBG00000017489	-	95	49.254	ENSMLEG00000038043	ZNF808	73	49.254	Mandrillus_leucophaeus
ENSCPBG00000017489	-	97	51.042	ENSMZEG00005025012	-	98	51.228	Maylandia_zebra
ENSCPBG00000017489	-	97	54.452	ENSMZEG00005021865	-	94	52.601	Maylandia_zebra
ENSCPBG00000017489	-	94	53.593	ENSMICG00000042544	-	81	48.884	Microcebus_murinus
ENSCPBG00000017489	-	97	50.106	ENSMODG00000018622	-	98	50.106	Monodelphis_domestica
ENSCPBG00000017489	-	95	48.665	MGP_CAROLIEiJ_G0029614	Zfp715	67	48.665	Mus_caroli
ENSCPBG00000017489	-	95	49.787	MGP_CAROLIEiJ_G0021128	Zfp51	87	48.926	Mus_caroli
ENSCPBG00000017489	-	94	54.291	MGP_CAROLIEiJ_G0029490	Zfp420	99	54.054	Mus_caroli
ENSCPBG00000017489	-	96	50.331	MGP_CAROLIEiJ_G0029427	-	90	43.631	Mus_caroli
ENSCPBG00000017489	-	97	50.197	ENSMUSG00000023892	Zfp51	81	49.235	Mus_musculus
ENSCPBG00000017489	-	97	48.344	ENSMUSG00000070709	Zfp974	92	42.699	Mus_musculus
ENSCPBG00000017489	-	95	48.665	ENSMUSG00000012640	Zfp715	71	48.665	Mus_musculus
ENSCPBG00000017489	-	93	54.682	ENSMUSG00000058402	Zfp420	99	54.682	Mus_musculus
ENSCPBG00000017489	-	94	44.422	MGP_PahariEiJ_G0012663	-	77	44.422	Mus_pahari
ENSCPBG00000017489	-	94	53.846	MGP_PahariEiJ_G0012724	Zfp420	99	53.846	Mus_pahari
ENSCPBG00000017489	-	95	48.471	MGP_PahariEiJ_G0023447	Zfp51	89	47.904	Mus_pahari
ENSCPBG00000017489	-	95	48.665	MGP_SPRETEiJ_G0030713	Zfp715	71	48.665	Mus_spretus
ENSCPBG00000017489	-	96	43.907	MGP_SPRETEiJ_G0030526	-	93	43.907	Mus_spretus
ENSCPBG00000017489	-	94	43.982	MGP_SPRETEiJ_G0030525	-	88	45.301	Mus_spretus
ENSCPBG00000017489	-	93	54.682	MGP_SPRETEiJ_G0030586	Zfp420	99	54.682	Mus_spretus
ENSCPBG00000017489	-	94	52.632	ENSMLUG00000015757	-	96	50.872	Myotis_lucifugus
ENSCPBG00000017489	-	94	48.973	ENSMLUG00000009276	-	87	48.832	Myotis_lucifugus
ENSCPBG00000017489	-	96	49.037	ENSNLEG00000006042	ZNF808	78	47.738	Nomascus_leucogenys
ENSCPBG00000017489	-	95	43.498	ENSONIG00000016979	-	98	43.590	Oreochromis_niloticus
ENSCPBG00000017489	-	94	51.653	ENSONIG00000007396	-	99	51.653	Oreochromis_niloticus
ENSCPBG00000017489	-	95	52.045	ENSORLG00000011040	-	87	52.045	Oryzias_latipes
ENSCPBG00000017489	-	96	46.974	ENSOMEG00000018871	-	79	46.974	Oryzias_melastigma
ENSCPBG00000017489	-	96	49.686	ENSOMEG00000001622	-	92	47.500	Oryzias_melastigma
ENSCPBG00000017489	-	95	48.842	ENSOARG00000002896	-	91	48.842	Ovis_aries
ENSCPBG00000017489	-	95	49.096	ENSPPAG00000038086	ZNF808	90	47.503	Pan_paniscus
ENSCPBG00000017489	-	95	52.727	ENSPANG00000011361	ZNF808	82	50.566	Papio_anubis
ENSCPBG00000017489	-	94	58.191	ENSPSIG00000009603	-	99	57.664	Pelodiscus_sinensis
ENSCPBG00000017489	-	95	47.667	ENSPSIG00000008588	-	100	47.667	Pelodiscus_sinensis
ENSCPBG00000017489	-	94	49.573	ENSPEMG00000000548	-	91	50.201	Peromyscus_maniculatus_bairdii
ENSCPBG00000017489	-	99	56.058	ENSPCIG00000018929	-	95	54.270	Phascolarctos_cinereus
ENSCPBG00000017489	-	99	50.602	ENSPLAG00000014660	-	98	50.794	Poecilia_latipinna
ENSCPBG00000017489	-	93	49.580	ENSPREG00000008826	-	98	46.154	Poecilia_reticulata
ENSCPBG00000017489	-	96	48.605	ENSPPYG00000029644	ZNF808	79	49.031	Pongo_abelii
ENSCPBG00000017489	-	93	49.087	ENSPVAG00000009433	-	99	49.087	Pteropus_vampyrus
ENSCPBG00000017489	-	94	66.154	ENSPNAG00000012154	-	92	66.154	Pygocentrus_nattereri
ENSCPBG00000017489	-	97	53.891	ENSPNAG00000021831	-	98	53.891	Pygocentrus_nattereri
ENSCPBG00000017489	-	97	52.174	ENSPNAG00000002244	-	92	50.467	Pygocentrus_nattereri
ENSCPBG00000017489	-	94	57.673	ENSPNAG00000006039	-	93	57.673	Pygocentrus_nattereri
ENSCPBG00000017489	-	95	55.495	ENSPNAG00000005829	-	95	55.809	Pygocentrus_nattereri
ENSCPBG00000017489	-	94	57.057	ENSPNAG00000016478	-	99	58.458	Pygocentrus_nattereri
ENSCPBG00000017489	-	97	58.881	ENSPNAG00000012495	-	86	56.542	Pygocentrus_nattereri
ENSCPBG00000017489	-	99	48.101	ENSRNOG00000043341	Zfp51	98	47.554	Rattus_norvegicus
ENSCPBG00000017489	-	97	49.452	ENSRBIG00000032168	-	83	50.101	Rhinopithecus_bieti
ENSCPBG00000017489	-	94	50.408	ENSRROG00000009467	ZNF808	90	49.247	Rhinopithecus_roxellana
ENSCPBG00000017489	-	94	45.874	ENSSHAG00000003090	-	93	44.921	Sarcophilus_harrisii
ENSCPBG00000017489	-	94	44.068	ENSSLDG00000016301	-	96	44.068	Seriola_lalandi_dorsalis
ENSCPBG00000017489	-	91	60.526	ENSSPUG00000000229	-	88	60.526	Sphenodon_punctatus
ENSCPBG00000017489	-	94	53.632	ENSSPUG00000000136	-	99	53.799	Sphenodon_punctatus
ENSCPBG00000017489	-	97	60.274	ENSSPUG00000009764	-	63	60.274	Sphenodon_punctatus
ENSCPBG00000017489	-	95	58.876	ENSSPUG00000018867	-	99	57.388	Sphenodon_punctatus
ENSCPBG00000017489	-	99	60.656	ENSSPUG00000009898	-	99	59.859	Sphenodon_punctatus
ENSCPBG00000017489	-	97	56.904	ENSTGUG00000014079	-	100	55.819	Taeniopygia_guttata
ENSCPBG00000017489	-	94	46.602	ENSTNIG00000008100	-	100	46.602	Tetraodon_nigroviridis
ENSCPBG00000017489	-	98	46.923	ENSTNIG00000005023	-	100	41.563	Tetraodon_nigroviridis
ENSCPBG00000017489	-	95	50.407	ENSTBEG00000016262	-	100	50.407	Tupaia_belangeri
ENSCPBG00000017489	-	97	55.022	ENSUMAG00000024602	-	99	49.467	Ursus_maritimus
ENSCPBG00000017489	-	97	60.897	ENSXETG00000016781	-	100	60.897	Xenopus_tropicalis