EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017494 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 8698 bases
Position: chrKK083247.1:297814-306511
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	1	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	2	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	3	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	4	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	5	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	6	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	7	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	8	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	9	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	10	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	11	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	12	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	13	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	14	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	15	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	16	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	17	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	18	19
ENSCPBP00000024531	zf-C2H2	PF00096.26	9.7e-113	19	19
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	1	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	2	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	3	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	4	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	5	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	6	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	7	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	8	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	9	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	10	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	11	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	12	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	13	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	14	15
ENSCPBP00000024535	zf-C2H2	PF00096.26	2.4e-95	15	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	1	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	2	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	3	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	4	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	5	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	6	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	7	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	8	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	9	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	10	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	11	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	12	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	13	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	14	15
ENSCPBP00000024536	zf-C2H2	PF00096.26	3.2e-92	15	15
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	1	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	2	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	3	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	4	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	5	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	6	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	7	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	8	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	9	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	10	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	11	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	12	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	13	14
ENSCPBP00000024538	zf-C2H2	PF00096.26	2.4e-85	14	14
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	1	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	2	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	3	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	4	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	5	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	6	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	7	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	8	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	9	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	10	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	11	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	12	13
ENSCPBP00000024528	zf-C2H2	PF00096.26	8.6e-83	13	13
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	1	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	2	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	3	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	4	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	5	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	6	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	7	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	8	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	9	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	10	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	11	12
ENSCPBP00000024529	zf-C2H2	PF00096.26	6.8e-72	12	12
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	1	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	2	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	3	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	4	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	5	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	6	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	7	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	8	9
ENSCPBP00000024527	zf-C2H2	PF00096.26	9.5e-58	9	9
ENSCPBP00000024531	zf-met	PF12874.7	6.3e-22	1	1
ENSCPBP00000024535	zf-met	PF12874.7	3.6e-20	1	1
ENSCPBP00000024538	zf-met	PF12874.7	2.6e-17	1	1
ENSCPBP00000024528	zf-met	PF12874.7	1.1e-16	1	1
ENSCPBP00000024529	zf-met	PF12874.7	7.6e-16	1	1
ENSCPBP00000024527	zf-met	PF12874.7	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028898	-	1617	-	ENSCPBP00000024529	538 (aa)	-	-
ENSCPBT00000028896	-	1659	-	ENSCPBP00000024527	552 (aa)	-	-
ENSCPBT00000028897	-	1641	-	ENSCPBP00000024528	546 (aa)	-	-
ENSCPBT00000028904	-	1584	-	ENSCPBP00000024535	527 (aa)	-	-
ENSCPBT00000028905	-	1662	-	ENSCPBP00000024536	553 (aa)	-	-
ENSCPBT00000028907	-	1731	-	ENSCPBP00000024538	576 (aa)	-	-
ENSCPBT00000028900	-	2100	-	ENSCPBP00000024531	699 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000017494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017494	-	91	51.701	ENSCPBG00000001526	-	88	52.239
ENSCPBG00000017494	-	84	63.068	ENSCPBG00000001258	-	98	62.805
ENSCPBG00000017494	-	98	63.900	ENSCPBG00000016841	-	98	65.753
ENSCPBG00000017494	-	87	38.813	ENSCPBG00000026947	ZNF319	93	39.938
ENSCPBG00000017494	-	100	65.169	ENSCPBG00000015500	-	99	74.419
ENSCPBG00000017494	-	85	39.370	ENSCPBG00000004542	ZNF865	83	39.352
ENSCPBG00000017494	-	85	57.527	ENSCPBG00000002063	-	72	57.527
ENSCPBG00000017494	-	88	71.739	ENSCPBG00000005703	-	68	71.326
ENSCPBG00000017494	-	84	43.913	ENSCPBG00000023418	-	61	43.913
ENSCPBG00000017494	-	90	52.877	ENSCPBG00000009609	-	97	56.458
ENSCPBG00000017494	-	98	63.021	ENSCPBG00000021479	-	99	64.035
ENSCPBG00000017494	-	99	72.308	ENSCPBG00000001272	-	99	72.700
ENSCPBG00000017494	-	98	64.111	ENSCPBG00000002430	-	98	63.144
ENSCPBG00000017494	-	95	70.000	ENSCPBG00000012976	-	99	65.185
ENSCPBG00000017494	-	89	68.502	ENSCPBG00000017489	-	100	71.237
ENSCPBG00000017494	-	91	68.553	ENSCPBG00000026433	-	74	66.197
ENSCPBG00000017494	-	99	66.959	ENSCPBG00000001421	-	98	69.853
ENSCPBG00000017494	-	85	41.946	ENSCPBG00000013652	-	76	43.007
ENSCPBG00000017494	-	86	37.021	ENSCPBG00000024735	PRDM5	89	38.426
ENSCPBG00000017494	-	99	65.924	ENSCPBG00000004990	-	100	66.192
ENSCPBG00000017494	-	99	67.042	ENSCPBG00000021487	-	96	67.399
ENSCPBG00000017494	-	90	49.215	ENSCPBG00000005715	ZBTB49	63	49.215
ENSCPBG00000017494	-	88	50.785	ENSCPBG00000005586	-	77	50.785
ENSCPBG00000017494	-	97	63.740	ENSCPBG00000003130	-	100	64.901
ENSCPBG00000017494	-	94	45.022	ENSCPBG00000008580	-	100	45.798
ENSCPBG00000017494	-	90	52.105	ENSCPBG00000009849	-	83	57.353
ENSCPBG00000017494	-	87	56.296	ENSCPBG00000015987	-	85	56.296
ENSCPBG00000017494	-	84	55.505	ENSCPBG00000002014	-	68	55.909
ENSCPBG00000017494	-	99	66.975	ENSCPBG00000004030	-	100	68.647
ENSCPBG00000017494	-	92	88.462	ENSCPBG00000003774	-	100	71.338
ENSCPBG00000017494	-	84	48.837	ENSCPBG00000016039	MYNN	51	48.624
ENSCPBG00000017494	-	100	68.475	ENSCPBG00000001181	-	98	68.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017494	-	95	61.201	ENSBTAG00000038088	-	99	61.538	Bos_taurus
ENSCPBG00000017494	-	99	60.000	ENSCAFG00000029340	-	99	61.201	Canis_familiaris
ENSCPBG00000017494	-	96	58.073	ENSCAFG00020014929	-	99	59.722	Canis_lupus_dingo
ENSCPBG00000017494	-	90	60.000	ENSCAFG00020014950	-	100	61.201	Canis_lupus_dingo
ENSCPBG00000017494	-	99	59.831	ENSEASG00005020355	-	100	64.865	Equus_asinus_asinus
ENSCPBG00000017494	-	88	59.326	ENSEASG00005020335	-	96	60.557	Equus_asinus_asinus
ENSCPBG00000017494	-	94	64.865	ENSECAG00000013505	-	100	64.865	Equus_caballus
ENSCPBG00000017494	-	99	57.784	ENSECAG00000002021	-	98	59.539	Equus_caballus
ENSCPBG00000017494	-	90	58.837	ENSECAG00000002193	-	99	58.439	Equus_caballus
ENSCPBG00000017494	-	99	62.548	ENSGAGG00000020594	-	100	65.714	Gopherus_agassizii
ENSCPBG00000017494	-	99	59.383	ENSLACG00000004191	-	91	60.325	Latimeria_chalumnae
ENSCPBG00000017494	-	99	58.486	ENSMPUG00000008442	-	99	59.058	Mustela_putorius_furo
ENSCPBG00000017494	-	99	58.770	ENSMPUG00000006213	-	99	60.839	Mustela_putorius_furo
ENSCPBG00000017494	-	91	60.233	ENSOARG00000003770	-	99	58.497	Ovis_aries
ENSCPBG00000017494	-	99	61.082	ENSPPAG00000037706	-	99	63.699	Pan_paniscus
ENSCPBG00000017494	-	99	59.780	ENSPSIG00000004614	-	99	63.230	Pelodiscus_sinensis
ENSCPBG00000017494	-	99	62.113	ENSSBOG00000022380	-	97	64.686	Saimiri_boliviensis_boliviensis
ENSCPBG00000017494	-	99	61.194	ENSSSCG00000031774	-	99	64.306	Sus_scrofa
ENSCPBG00000017494	-	94	60.145	ENSUAMG00000027381	-	100	60.145	Ursus_americanus
ENSCPBG00000017494	-	91	57.653	ENSUAMG00000028270	-	90	63.033	Ursus_americanus
ENSCPBG00000017494	-	94	55.378	ENSUMAG00000004054	-	100	55.378	Ursus_maritimus
ENSCPBG00000017494	-	94	60.145	ENSUMAG00000004061	-	100	60.145	Ursus_maritimus
ENSCPBG00000017494	-	88	58.087	ENSVVUG00000002085	-	90	59.122	Vulpes_vulpes
ENSCPBG00000017494	-	90	60.000	ENSVVUG00000001996	-	100	61.201	Vulpes_vulpes