EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000017497 (Gene tree)
Gene ID: 101940399
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 52603 bases
Position: chrKK083104.1:461458-514060
Accession: 17103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024546	Xpo1	PF08389.12	5.4e-28	1	1
ENSCPBP00000024547	Xpo1	PF08389.12	5.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028916	TNPO3-202	2984	XM_005281296	ENSCPBP00000024547	857 (aa)	XP_005281353	UPI000388FCF0
ENSCPBT00000028915	TNPO3-201	2984	XM_005281296	ENSCPBP00000024546	857 (aa)	XP_005281353	UPI000388FCF0

Gene Model

Click here to download ENSCPBG00000017497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017497	TNPO3	100	94.749	ENSG00000064419	TNPO3	100	94.749	Homo_sapiens
ENSCPBG00000017497	TNPO3	100	85.414	ENSAPOG00000018347	tnpo3	93	85.414	Acanthochromis_polyacanthus
ENSCPBG00000017497	TNPO3	99	91.196	ENSAMEG00000005135	TNPO3	92	91.196	Ailuropoda_melanoleuca
ENSCPBG00000017497	TNPO3	100	83.781	ENSACIG00000005897	tnpo3	96	83.781	Amphilophus_citrinellus
ENSCPBG00000017497	TNPO3	100	85.531	ENSAOCG00000008264	tnpo3	93	85.531	Amphiprion_ocellaris
ENSCPBG00000017497	TNPO3	100	85.531	ENSAPEG00000024300	tnpo3	97	85.531	Amphiprion_percula
ENSCPBG00000017497	TNPO3	100	84.947	ENSATEG00000003197	tnpo3	93	84.947	Anabas_testudineus
ENSCPBG00000017497	TNPO3	73	96.021	ENSAPLG00000005946	TNPO3	86	96.021	Anas_platyrhynchos
ENSCPBG00000017497	TNPO3	83	94.640	ENSACAG00000013470	TNPO3	89	94.640	Anolis_carolinensis
ENSCPBG00000017497	TNPO3	100	94.749	ENSANAG00000037940	TNPO3	93	94.749	Aotus_nancymaae
ENSCPBG00000017497	TNPO3	100	85.648	ENSACLG00000005561	tnpo3	93	85.648	Astatotilapia_calliptera
ENSCPBG00000017497	TNPO3	100	84.947	ENSAMXG00000016236	tnpo3	93	84.947	Astyanax_mexicanus
ENSCPBG00000017497	TNPO3	100	94.516	ENSBTAG00000004992	TNPO3	100	94.516	Bos_taurus
ENSCPBG00000017497	TNPO3	100	94.749	ENSCJAG00000018085	TNPO3	93	94.749	Callithrix_jacchus
ENSCPBG00000017497	TNPO3	100	94.866	ENSCAFG00000001543	TNPO3	93	94.866	Canis_familiaris
ENSCPBG00000017497	TNPO3	100	94.866	ENSCAFG00020022462	TNPO3	92	94.425	Canis_lupus_dingo
ENSCPBG00000017497	TNPO3	100	94.632	ENSCHIG00000011721	TNPO3	93	94.632	Capra_hircus
ENSCPBG00000017497	TNPO3	100	94.632	ENSTSYG00000002989	TNPO3	93	94.632	Carlito_syrichta
ENSCPBG00000017497	TNPO3	77	92.553	ENSCAPG00000005843	TNPO3	91	92.553	Cavia_aperea
ENSCPBG00000017497	TNPO3	100	94.399	ENSCPOG00000039784	TNPO3	93	94.399	Cavia_porcellus
ENSCPBG00000017497	TNPO3	100	94.866	ENSCCAG00000033826	TNPO3	100	94.866	Cebus_capucinus
ENSCPBG00000017497	TNPO3	100	94.749	ENSCATG00000030018	TNPO3	100	94.749	Cercocebus_atys
ENSCPBG00000017497	TNPO3	100	93.612	ENSCLAG00000016298	TNPO3	93	93.612	Chinchilla_lanigera
ENSCPBG00000017497	TNPO3	100	94.632	ENSCSAG00000009966	TNPO3	93	94.632	Chlorocebus_sabaeus
ENSCPBG00000017497	TNPO3	96	70.926	ENSCHOG00000011547	TNPO3	89	70.926	Choloepus_hoffmanni
ENSCPBG00000017497	TNPO3	100	47.680	ENSCING00000005042	-	93	47.680	Ciona_intestinalis
ENSCPBG00000017497	TNPO3	100	45.993	ENSCSAVG00000008623	-	93	45.993	Ciona_savignyi
ENSCPBG00000017497	TNPO3	100	94.749	ENSCANG00000033070	TNPO3	100	94.749	Colobus_angolensis_palliatus
ENSCPBG00000017497	TNPO3	100	94.749	ENSCGRG00001015925	Tnpo3	93	94.749	Cricetulus_griseus_chok1gshd
ENSCPBG00000017497	TNPO3	100	94.749	ENSCGRG00000010379	Tnpo3	93	94.749	Cricetulus_griseus_crigri
ENSCPBG00000017497	TNPO3	100	83.781	ENSCSEG00000005952	tnpo3	93	83.781	Cynoglossus_semilaevis
ENSCPBG00000017497	TNPO3	100	85.298	ENSCVAG00000020285	tnpo3	93	85.298	Cyprinodon_variegatus
ENSCPBG00000017497	TNPO3	100	84.831	ENSDARG00000045680	tnpo3	93	84.831	Danio_rerio
ENSCPBG00000017497	TNPO3	100	94.749	ENSDNOG00000002556	TNPO3	93	94.749	Dasypus_novemcinctus
ENSCPBG00000017497	TNPO3	59	92.008	ENSDORG00000002433	Tnpo3	84	92.008	Dipodomys_ordii
ENSCPBG00000017497	TNPO3	100	42.002	FBgn0031456	Tnpo-SR	93	41.772	Drosophila_melanogaster
ENSCPBG00000017497	TNPO3	94	93.782	ENSETEG00000002101	TNPO3	83	93.782	Echinops_telfairi
ENSCPBG00000017497	TNPO3	100	70.945	ENSEBUG00000016931	tnpo3	93	70.945	Eptatretus_burgeri
ENSCPBG00000017497	TNPO3	100	94.982	ENSEASG00005008677	TNPO3	93	94.982	Equus_asinus_asinus
ENSCPBG00000017497	TNPO3	100	94.982	ENSECAG00000012815	TNPO3	100	94.982	Equus_caballus
ENSCPBG00000017497	TNPO3	99	89.130	ENSEEUG00000005178	TNPO3	91	89.130	Erinaceus_europaeus
ENSCPBG00000017497	TNPO3	100	85.648	ENSELUG00000012153	tnpo3	93	85.648	Esox_lucius
ENSCPBG00000017497	TNPO3	100	94.866	ENSFCAG00000018186	TNPO3	100	94.866	Felis_catus
ENSCPBG00000017497	TNPO3	100	91.734	ENSFALG00000010667	TNPO3	97	91.734	Ficedula_albicollis
ENSCPBG00000017497	TNPO3	100	94.063	ENSFDAG00000019578	TNPO3	93	94.063	Fukomys_damarensis
ENSCPBG00000017497	TNPO3	100	85.414	ENSFHEG00000012859	tnpo3	93	85.414	Fundulus_heteroclitus
ENSCPBG00000017497	TNPO3	100	84.481	ENSGMOG00000007324	tnpo3	93	84.481	Gadus_morhua
ENSCPBG00000017497	TNPO3	58	96.988	ENSGALG00000039420	TNPO3	87	96.988	Gallus_gallus
ENSCPBG00000017497	TNPO3	100	84.947	ENSGACG00000000699	tnpo3	93	84.947	Gasterosteus_aculeatus
ENSCPBG00000017497	TNPO3	100	99.883	ENSGAGG00000006777	TNPO3	100	99.883	Gopherus_agassizii
ENSCPBG00000017497	TNPO3	100	94.749	ENSGGOG00000008339	TNPO3	100	94.749	Gorilla_gorilla
ENSCPBG00000017497	TNPO3	100	85.648	ENSHBUG00000008351	tnpo3	93	85.648	Haplochromis_burtoni
ENSCPBG00000017497	TNPO3	100	94.866	ENSHGLG00000004463	TNPO3	93	94.866	Heterocephalus_glaber_female
ENSCPBG00000017497	TNPO3	100	94.866	ENSHGLG00100005509	TNPO3	93	94.866	Heterocephalus_glaber_male
ENSCPBG00000017497	TNPO3	100	84.014	ENSHCOG00000007221	tnpo3	93	84.014	Hippocampus_comes
ENSCPBG00000017497	TNPO3	100	83.897	ENSIPUG00000014979	TNPO3	93	83.897	Ictalurus_punctatus
ENSCPBG00000017497	TNPO3	100	94.749	ENSSTOG00000004885	TNPO3	100	94.749	Ictidomys_tridecemlineatus
ENSCPBG00000017497	TNPO3	99	90.000	ENSJJAG00000013530	Tnpo3	95	90.000	Jaculus_jaculus
ENSCPBG00000017497	TNPO3	100	84.831	ENSKMAG00000010497	tnpo3	93	84.831	Kryptolebias_marmoratus
ENSCPBG00000017497	TNPO3	100	80.863	ENSLBEG00000011988	-	96	80.863	Labrus_bergylta
ENSCPBG00000017497	TNPO3	97	85.834	ENSLBEG00000016595	tnpo3	97	85.834	Labrus_bergylta
ENSCPBG00000017497	TNPO3	82	91.597	ENSLACG00000002351	TNPO3	91	91.597	Latimeria_chalumnae
ENSCPBG00000017497	TNPO3	100	87.281	ENSLOCG00000015556	tnpo3	93	87.281	Lepisosteus_oculatus
ENSCPBG00000017497	TNPO3	100	94.309	ENSLAFG00000002738	TNPO3	93	94.309	Loxodonta_africana
ENSCPBG00000017497	TNPO3	100	94.749	ENSMFAG00000032385	TNPO3	100	94.749	Macaca_fascicularis
ENSCPBG00000017497	TNPO3	100	94.749	ENSMMUG00000004311	TNPO3	100	94.749	Macaca_mulatta
ENSCPBG00000017497	TNPO3	100	94.749	ENSMNEG00000045277	TNPO3	100	94.749	Macaca_nemestrina
ENSCPBG00000017497	TNPO3	100	94.749	ENSMLEG00000037881	TNPO3	100	94.749	Mandrillus_leucophaeus
ENSCPBG00000017497	TNPO3	100	85.298	ENSMAMG00000021096	tnpo3	93	85.298	Mastacembelus_armatus
ENSCPBG00000017497	TNPO3	100	85.648	ENSMZEG00005015084	tnpo3	93	85.648	Maylandia_zebra
ENSCPBG00000017497	TNPO3	81	91.367	ENSMGAG00000002839	TNPO3	95	91.367	Meleagris_gallopavo
ENSCPBG00000017497	TNPO3	100	94.632	ENSMAUG00000013463	Tnpo3	93	94.632	Mesocricetus_auratus
ENSCPBG00000017497	TNPO3	100	94.866	ENSMICG00000000140	TNPO3	93	94.866	Microcebus_murinus
ENSCPBG00000017497	TNPO3	100	94.749	ENSMOCG00000013264	Tnpo3	93	94.749	Microtus_ochrogaster
ENSCPBG00000017497	TNPO3	100	84.597	ENSMMOG00000005887	tnpo3	93	84.597	Mola_mola
ENSCPBG00000017497	TNPO3	100	96.266	ENSMODG00000014700	TNPO3	93	96.266	Monodelphis_domestica
ENSCPBG00000017497	TNPO3	100	84.714	ENSMALG00000006675	tnpo3	93	84.714	Monopterus_albus
ENSCPBG00000017497	TNPO3	100	94.516	MGP_CAROLIEiJ_G0028176	Tnpo3	93	94.516	Mus_caroli
ENSCPBG00000017497	TNPO3	100	94.516	ENSMUSG00000012535	Tnpo3	93	94.516	Mus_musculus
ENSCPBG00000017497	TNPO3	100	94.632	MGP_PahariEiJ_G0021934	Tnpo3	93	94.632	Mus_pahari
ENSCPBG00000017497	TNPO3	100	94.399	MGP_SPRETEiJ_G0029176	Tnpo3	93	94.399	Mus_spretus
ENSCPBG00000017497	TNPO3	100	94.866	ENSMPUG00000006021	TNPO3	93	94.866	Mustela_putorius_furo
ENSCPBG00000017497	TNPO3	100	84.831	ENSMLUG00000000947	TNPO3	92	84.831	Myotis_lucifugus
ENSCPBG00000017497	TNPO3	100	94.749	ENSNGAG00000008722	Tnpo3	93	94.749	Nannospalax_galili
ENSCPBG00000017497	TNPO3	100	84.247	ENSNBRG00000019001	tnpo3	93	85.627	Neolamprologus_brichardi
ENSCPBG00000017497	TNPO3	100	90.909	ENSNLEG00000012491	TNPO3	93	90.909	Nomascus_leucogenys
ENSCPBG00000017497	TNPO3	89	92.414	ENSMEUG00000002445	TNPO3	83	92.414	Notamacropus_eugenii
ENSCPBG00000017497	TNPO3	90	95.763	ENSOPRG00000006163	TNPO3	83	95.763	Ochotona_princeps
ENSCPBG00000017497	TNPO3	98	94.026	ENSODEG00000012826	TNPO3	93	94.026	Octodon_degus
ENSCPBG00000017497	TNPO3	100	85.648	ENSONIG00000007604	tnpo3	93	85.648	Oreochromis_niloticus
ENSCPBG00000017497	TNPO3	99	92.067	ENSOANG00000011451	TNPO3	97	92.067	Ornithorhynchus_anatinus
ENSCPBG00000017497	TNPO3	99	90.858	ENSOCUG00000010105	TNPO3	92	90.858	Oryctolagus_cuniculus
ENSCPBG00000017497	TNPO3	100	83.897	ENSORLG00000029369	tnpo3	93	83.897	Oryzias_latipes
ENSCPBG00000017497	TNPO3	100	83.897	ENSORLG00020003464	tnpo3	93	83.897	Oryzias_latipes_hni
ENSCPBG00000017497	TNPO3	100	84.014	ENSORLG00015002610	tnpo3	93	84.014	Oryzias_latipes_hsok
ENSCPBG00000017497	TNPO3	100	84.131	ENSOMEG00000021006	tnpo3	93	84.131	Oryzias_melastigma
ENSCPBG00000017497	TNPO3	100	94.632	ENSOGAG00000015340	TNPO3	93	94.632	Otolemur_garnettii
ENSCPBG00000017497	TNPO3	100	94.516	ENSOARG00000004026	TNPO3	93	94.516	Ovis_aries
ENSCPBG00000017497	TNPO3	100	94.749	ENSPPAG00000034975	TNPO3	100	94.749	Pan_paniscus
ENSCPBG00000017497	TNPO3	100	94.866	ENSPPRG00000002050	TNPO3	93	94.866	Panthera_pardus
ENSCPBG00000017497	TNPO3	100	94.866	ENSPTIG00000016167	TNPO3	93	94.866	Panthera_tigris_altaica
ENSCPBG00000017497	TNPO3	100	94.749	ENSPTRG00000019676	TNPO3	100	94.749	Pan_troglodytes
ENSCPBG00000017497	TNPO3	98	94.517	ENSPANG00000022226	TNPO3	92	94.517	Papio_anubis
ENSCPBG00000017497	TNPO3	100	82.730	ENSPKIG00000023234	tnpo3	93	82.730	Paramormyrops_kingsleyae
ENSCPBG00000017497	TNPO3	100	79.651	ENSPKIG00000008628	-	93	79.651	Paramormyrops_kingsleyae
ENSCPBG00000017497	TNPO3	59	76.892	ENSPMGG00000009763	tnpo3	87	76.892	Periophthalmus_magnuspinnatus
ENSCPBG00000017497	TNPO3	100	94.866	ENSPEMG00000000422	Tnpo3	93	94.866	Peromyscus_maniculatus_bairdii
ENSCPBG00000017497	TNPO3	100	72.177	ENSPMAG00000008621	tnpo3	97	72.177	Petromyzon_marinus
ENSCPBG00000017497	TNPO3	100	95.799	ENSPCIG00000011366	TNPO3	93	95.799	Phascolarctos_cinereus
ENSCPBG00000017497	TNPO3	100	84.247	ENSPFOG00000013592	tnpo3	93	84.247	Poecilia_formosa
ENSCPBG00000017497	TNPO3	100	84.247	ENSPLAG00000010188	tnpo3	93	84.247	Poecilia_latipinna
ENSCPBG00000017497	TNPO3	100	84.364	ENSPMEG00000022731	tnpo3	93	84.364	Poecilia_mexicana
ENSCPBG00000017497	TNPO3	100	94.749	ENSPPYG00000017990	TNPO3	93	94.749	Pongo_abelii
ENSCPBG00000017497	TNPO3	93	87.560	ENSPCAG00000010158	TNPO3	86	87.560	Procavia_capensis
ENSCPBG00000017497	TNPO3	89	96.053	ENSPCOG00000023901	TNPO3	89	96.053	Propithecus_coquereli
ENSCPBG00000017497	TNPO3	99	87.923	ENSPVAG00000015757	TNPO3	92	87.923	Pteropus_vampyrus
ENSCPBG00000017497	TNPO3	100	85.648	ENSPNYG00000002349	tnpo3	93	85.648	Pundamilia_nyererei
ENSCPBG00000017497	TNPO3	100	85.531	ENSPNAG00000001142	tnpo3	93	85.531	Pygocentrus_nattereri
ENSCPBG00000017497	TNPO3	100	94.399	ENSRNOG00000021758	Tnpo3	100	94.399	Rattus_norvegicus
ENSCPBG00000017497	TNPO3	100	94.632	ENSRBIG00000042549	TNPO3	100	94.632	Rhinopithecus_bieti
ENSCPBG00000017497	TNPO3	100	94.632	ENSRROG00000039264	TNPO3	93	94.632	Rhinopithecus_roxellana
ENSCPBG00000017497	TNPO3	100	74.747	ENSSBOG00000029642	TNPO3	92	74.747	Saimiri_boliviensis_boliviensis
ENSCPBG00000017497	TNPO3	100	96.383	ENSSHAG00000006837	TNPO3	97	96.383	Sarcophilus_harrisii
ENSCPBG00000017497	TNPO3	100	83.781	ENSSFOG00015001474	tnpo3	93	83.781	Scleropages_formosus
ENSCPBG00000017497	TNPO3	100	79.885	ENSSFOG00015004256	tnpo3	93	79.885	Scleropages_formosus
ENSCPBG00000017497	TNPO3	100	85.064	ENSSMAG00000010422	tnpo3	90	85.064	Scophthalmus_maximus
ENSCPBG00000017497	TNPO3	100	85.764	ENSSDUG00000004850	tnpo3	93	85.764	Seriola_dumerili
ENSCPBG00000017497	TNPO3	100	85.764	ENSSLDG00000016927	tnpo3	93	85.764	Seriola_lalandi_dorsalis
ENSCPBG00000017497	TNPO3	99	82.333	ENSSARG00000013893	TNPO3	96	82.333	Sorex_araneus
ENSCPBG00000017497	TNPO3	100	90.338	ENSSPUG00000007457	TNPO3	92	90.338	Sphenodon_punctatus
ENSCPBG00000017497	TNPO3	77	86.212	ENSSPAG00000014209	tnpo3	90	86.212	Stegastes_partitus
ENSCPBG00000017497	TNPO3	100	94.866	ENSSSCG00000016572	TNPO3	100	94.866	Sus_scrofa
ENSCPBG00000017497	TNPO3	100	83.140	ENSTNIG00000003347	tnpo3	93	83.140	Tetraodon_nigroviridis
ENSCPBG00000017497	TNPO3	87	95.469	ENSTBEG00000007220	TNPO3	83	95.469	Tupaia_belangeri
ENSCPBG00000017497	TNPO3	99	79.233	ENSTTRG00000014618	TNPO3	92	79.233	Tursiops_truncatus
ENSCPBG00000017497	TNPO3	100	94.866	ENSUAMG00000021281	TNPO3	93	94.866	Ursus_americanus
ENSCPBG00000017497	TNPO3	100	94.866	ENSUMAG00000006882	TNPO3	93	94.866	Ursus_maritimus
ENSCPBG00000017497	TNPO3	88	80.742	ENSVPAG00000006166	TNPO3	85	80.742	Vicugna_pacos
ENSCPBG00000017497	TNPO3	100	94.866	ENSVVUG00000011004	TNPO3	95	94.723	Vulpes_vulpes
ENSCPBG00000017497	TNPO3	100	81.395	ENSXETG00000015009	tnpo3	93	81.395	Xenopus_tropicalis
ENSCPBG00000017497	TNPO3	100	84.247	ENSXMAG00000013062	tnpo3	93	84.247	Xiphophorus_maculatus