EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000017519 (Gene tree)
Gene ID: 101943873
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 17018 bases
Position: chrKK083104.1:1073322-1090339
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024602	zf-C3HC	PF07967.13	7.1e-35	1	1
ENSCPBP00000024602	Rsm1	PF08600.10	4.7e-18	1	2
ENSCPBP00000024602	Rsm1	PF08600.10	4.7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000028981	ZC3HC1-201	2208	-	ENSCPBP00000024602	498 (aa)	XP_005281366	UPI000388FDC4

Gene Model

Click here to download ENSCPBG00000017519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017519	ZC3HC1	99	67.793	ENSG00000091732	ZC3HC1	96	68.866	Homo_sapiens
ENSCPBG00000017519	ZC3HC1	97	45.059	ENSAPOG00000009078	zc3hc1	97	45.257	Acanthochromis_polyacanthus
ENSCPBG00000017519	ZC3HC1	100	66.798	ENSAMEG00000005425	ZC3HC1	96	67.623	Ailuropoda_melanoleuca
ENSCPBG00000017519	ZC3HC1	97	41.732	ENSACIG00000019513	zc3hc1	97	41.929	Amphilophus_citrinellus
ENSCPBG00000017519	ZC3HC1	97	45.040	ENSAOCG00000024310	zc3hc1	97	45.238	Amphiprion_ocellaris
ENSCPBG00000017519	ZC3HC1	97	45.040	ENSAPEG00000004907	zc3hc1	97	43.452	Amphiprion_percula
ENSCPBG00000017519	ZC3HC1	82	46.714	ENSATEG00000016898	zc3hc1	85	46.244	Anabas_testudineus
ENSCPBG00000017519	ZC3HC1	89	67.873	ENSAPLG00000003832	ZC3HC1	99	67.873	Anas_platyrhynchos
ENSCPBG00000017519	ZC3HC1	100	69.080	ENSACAG00000001638	ZC3HC1	96	70.204	Anolis_carolinensis
ENSCPBG00000017519	ZC3HC1	100	66.337	ENSANAG00000022213	ZC3HC1	96	67.146	Aotus_nancymaae
ENSCPBG00000017519	ZC3HC1	87	46.532	ENSACLG00000025033	zc3hc1	95	46.548	Astatotilapia_calliptera
ENSCPBG00000017519	ZC3HC1	95	41.042	ENSAMXG00000036792	zc3hc1	97	41.042	Astyanax_mexicanus
ENSCPBG00000017519	ZC3HC1	96	68.050	ENSBTAG00000011247	ZC3HC1	96	68.050	Bos_taurus
ENSCPBG00000017519	ZC3HC1	100	67.262	ENSCJAG00000010536	ZC3HC1	96	68.107	Callithrix_jacchus
ENSCPBG00000017519	ZC3HC1	100	68.452	ENSCAFG00000031850	-	96	69.342	Canis_familiaris
ENSCPBG00000017519	ZC3HC1	100	67.653	ENSCAFG00000001499	-	95	68.507	Canis_familiaris
ENSCPBG00000017519	ZC3HC1	100	68.452	ENSCAFG00000028735	-	96	69.342	Canis_familiaris
ENSCPBG00000017519	ZC3HC1	100	68.452	ENSCAFG00000029401	-	95	69.342	Canis_familiaris
ENSCPBG00000017519	ZC3HC1	100	66.601	ENSCAFG00020023333	-	96	67.418	Canis_lupus_dingo
ENSCPBG00000017519	ZC3HC1	100	68.254	ENSCAFG00020006829	-	96	69.136	Canis_lupus_dingo
ENSCPBG00000017519	ZC3HC1	100	60.317	ENSCHIG00000014103	ZC3HC1	95	61.411	Capra_hircus
ENSCPBG00000017519	ZC3HC1	100	66.468	ENSTSYG00000002843	ZC3HC1	96	67.284	Carlito_syrichta
ENSCPBG00000017519	ZC3HC1	91	50.000	ENSCAPG00000016300	ZC3HC1	100	49.455	Cavia_aperea
ENSCPBG00000017519	ZC3HC1	100	64.215	ENSCPOG00000014034	ZC3HC1	96	64.742	Cavia_porcellus
ENSCPBG00000017519	ZC3HC1	100	53.373	ENSCCAG00000020384	ZC3HC1	100	64.912	Cebus_capucinus
ENSCPBG00000017519	ZC3HC1	100	67.460	ENSCATG00000023130	ZC3HC1	96	68.824	Cercocebus_atys
ENSCPBG00000017519	ZC3HC1	100	46.918	ENSCLAG00000008260	ZC3HC1	95	46.708	Chinchilla_lanigera
ENSCPBG00000017519	ZC3HC1	73	66.848	ENSCSAG00000009881	ZC3HC1	97	66.848	Chlorocebus_sabaeus
ENSCPBG00000017519	ZC3HC1	90	68.212	ENSCHOG00000011846	ZC3HC1	99	68.212	Choloepus_hoffmanni
ENSCPBG00000017519	ZC3HC1	100	67.262	ENSCANG00000029091	ZC3HC1	96	68.107	Colobus_angolensis_palliatus
ENSCPBG00000017519	ZC3HC1	97	66.872	ENSCGRG00001018805	Zc3hc1	96	66.872	Cricetulus_griseus_chok1gshd
ENSCPBG00000017519	ZC3HC1	97	65.844	ENSCGRG00000017114	Zc3hc1	96	65.844	Cricetulus_griseus_crigri
ENSCPBG00000017519	ZC3HC1	96	43.849	ENSCSEG00000009284	zc3hc1	94	44.177	Cynoglossus_semilaevis
ENSCPBG00000017519	ZC3HC1	97	43.426	ENSCVAG00000011566	zc3hc1	97	42.147	Cyprinodon_variegatus
ENSCPBG00000017519	ZC3HC1	99	47.162	ENSDARG00000062651	zc3hc1	96	47.571	Danio_rerio
ENSCPBG00000017519	ZC3HC1	100	66.865	ENSDNOG00000045016	ZC3HC1	96	67.695	Dasypus_novemcinctus
ENSCPBG00000017519	ZC3HC1	100	60.913	ENSDORG00000008697	Zc3hc1	96	61.728	Dipodomys_ordii
ENSCPBG00000017519	ZC3HC1	91	68.722	ENSEASG00005008789	ZC3HC1	97	68.722	Equus_asinus_asinus
ENSCPBG00000017519	ZC3HC1	100	67.525	ENSECAG00000017886	ZC3HC1	96	68.737	Equus_caballus
ENSCPBG00000017519	ZC3HC1	83	64.198	ENSEEUG00000003123	ZC3HC1	80	64.198	Erinaceus_europaeus
ENSCPBG00000017519	ZC3HC1	99	44.574	ENSELUG00000023168	zc3hc1	96	47.610	Esox_lucius
ENSCPBG00000017519	ZC3HC1	100	67.659	ENSFCAG00000010429	ZC3HC1	100	66.034	Felis_catus
ENSCPBG00000017519	ZC3HC1	91	66.452	ENSFALG00000005006	ZC3HC1	100	66.452	Ficedula_albicollis
ENSCPBG00000017519	ZC3HC1	97	67.835	ENSFDAG00000019897	ZC3HC1	96	67.847	Fukomys_damarensis
ENSCPBG00000017519	ZC3HC1	96	43.600	ENSFHEG00000020149	zc3hc1	97	43.478	Fundulus_heteroclitus
ENSCPBG00000017519	ZC3HC1	97	41.734	ENSGMOG00000002914	zc3hc1	95	42.945	Gadus_morhua
ENSCPBG00000017519	ZC3HC1	98	71.429	ENSGALG00000008003	ZC3HC1	97	71.726	Gallus_gallus
ENSCPBG00000017519	ZC3HC1	96	42.944	ENSGAFG00000016095	zc3hc1	96	43.373	Gambusia_affinis
ENSCPBG00000017519	ZC3HC1	95	45.325	ENSGACG00000019706	zc3hc1	95	44.130	Gasterosteus_aculeatus
ENSCPBG00000017519	ZC3HC1	78	95.630	ENSGAGG00000016106	ZC3HC1	100	95.630	Gopherus_agassizii
ENSCPBG00000017519	ZC3HC1	99	67.992	ENSGGOG00000015504	ZC3HC1	96	69.072	Gorilla_gorilla
ENSCPBG00000017519	ZC3HC1	96	44.758	ENSHBUG00000008347	zc3hc1	96	44.779	Haplochromis_burtoni
ENSCPBG00000017519	ZC3HC1	100	66.600	ENSHGLG00000005085	ZC3HC1	96	67.629	Heterocephalus_glaber_female
ENSCPBG00000017519	ZC3HC1	100	66.402	ENSHGLG00100011395	ZC3HC1	96	67.423	Heterocephalus_glaber_male
ENSCPBG00000017519	ZC3HC1	98	44.130	ENSHCOG00000014309	zc3hc1	97	44.960	Hippocampus_comes
ENSCPBG00000017519	ZC3HC1	98	66.735	ENSSTOG00000023599	-	96	67.078	Ictidomys_tridecemlineatus
ENSCPBG00000017519	ZC3HC1	97	44.311	ENSKMAG00000015315	zc3hc1	91	42.315	Kryptolebias_marmoratus
ENSCPBG00000017519	ZC3HC1	97	44.181	ENSLBEG00000017325	zc3hc1	97	43.195	Labrus_bergylta
ENSCPBG00000017519	ZC3HC1	78	58.477	ENSLACG00000013032	ZC3HC1	95	58.706	Latimeria_chalumnae
ENSCPBG00000017519	ZC3HC1	99	53.242	ENSLOCG00000015963	zc3hc1	97	54.032	Lepisosteus_oculatus
ENSCPBG00000017519	ZC3HC1	100	66.078	ENSLAFG00000001292	ZC3HC1	96	67.480	Loxodonta_africana
ENSCPBG00000017519	ZC3HC1	100	67.460	ENSMFAG00000030176	ZC3HC1	97	67.325	Macaca_fascicularis
ENSCPBG00000017519	ZC3HC1	100	66.337	ENSMMUG00000006155	ZC3HC1	99	66.940	Macaca_mulatta
ENSCPBG00000017519	ZC3HC1	100	67.659	ENSMNEG00000011833	ZC3HC1	96	68.824	Macaca_nemestrina
ENSCPBG00000017519	ZC3HC1	100	67.659	ENSMLEG00000027328	ZC3HC1	98	67.391	Mandrillus_leucophaeus
ENSCPBG00000017519	ZC3HC1	96	45.783	ENSMAMG00000010691	zc3hc1	96	45.984	Mastacembelus_armatus
ENSCPBG00000017519	ZC3HC1	96	44.556	ENSMZEG00005007142	zc3hc1	96	44.578	Maylandia_zebra
ENSCPBG00000017519	ZC3HC1	98	68.750	ENSMGAG00000002977	ZC3HC1	97	70.226	Meleagris_gallopavo
ENSCPBG00000017519	ZC3HC1	82	62.350	ENSMAUG00000017032	Zc3hc1	92	62.350	Mesocricetus_auratus
ENSCPBG00000017519	ZC3HC1	100	67.063	ENSMICG00000009167	ZC3HC1	96	67.901	Microcebus_murinus
ENSCPBG00000017519	ZC3HC1	100	65.873	ENSMOCG00000015239	Zc3hc1	96	66.872	Microtus_ochrogaster
ENSCPBG00000017519	ZC3HC1	87	43.267	ENSMMOG00000002204	zc3hc1	99	42.605	Mola_mola
ENSCPBG00000017519	ZC3HC1	99	57.834	ENSMODG00000014630	ZC3HC1	95	58.600	Monodelphis_domestica
ENSCPBG00000017519	ZC3HC1	94	44.877	ENSMALG00000014447	zc3hc1	96	44.153	Monopterus_albus
ENSCPBG00000017519	ZC3HC1	97	65.844	MGP_CAROLIEiJ_G0028183	Zc3hc1	96	65.844	Mus_caroli
ENSCPBG00000017519	ZC3HC1	97	65.638	ENSMUSG00000039130	Zc3hc1	96	65.638	Mus_musculus
ENSCPBG00000017519	ZC3HC1	97	60.494	MGP_PahariEiJ_G0021941	Zc3hc1	96	60.494	Mus_pahari
ENSCPBG00000017519	ZC3HC1	96	65.975	MGP_SPRETEiJ_G0029183	Zc3hc1	96	65.975	Mus_spretus
ENSCPBG00000017519	ZC3HC1	95	66.250	ENSMPUG00000005297	ZC3HC1	94	65.344	Mustela_putorius_furo
ENSCPBG00000017519	ZC3HC1	100	66.667	ENSMLUG00000000063	-	96	67.485	Myotis_lucifugus
ENSCPBG00000017519	ZC3HC1	67	60.350	ENSMLUG00000029228	-	99	60.350	Myotis_lucifugus
ENSCPBG00000017519	ZC3HC1	100	65.873	ENSNGAG00000019014	Zc3hc1	96	66.667	Nannospalax_galili
ENSCPBG00000017519	ZC3HC1	96	44.106	ENSNBRG00000004577	zc3hc1	96	44.332	Neolamprologus_brichardi
ENSCPBG00000017519	ZC3HC1	99	66.998	ENSNLEG00000012698	ZC3HC1	97	67.123	Nomascus_leucogenys
ENSCPBG00000017519	ZC3HC1	99	68.938	ENSMEUG00000011023	ZC3HC1	96	69.753	Notamacropus_eugenii
ENSCPBG00000017519	ZC3HC1	65	64.341	ENSOPRG00000007867	-	63	66.250	Ochotona_princeps
ENSCPBG00000017519	ZC3HC1	100	64.215	ENSODEG00000014604	ZC3HC1	96	64.948	Octodon_degus
ENSCPBG00000017519	ZC3HC1	97	44.088	ENSONIG00000011644	zc3hc1	97	44.311	Oreochromis_niloticus
ENSCPBG00000017519	ZC3HC1	91	62.876	ENSOANG00000011460	ZC3HC1	100	62.876	Ornithorhynchus_anatinus
ENSCPBG00000017519	ZC3HC1	100	63.708	ENSOCUG00000017137	ZC3HC1	96	64.622	Oryctolagus_cuniculus
ENSCPBG00000017519	ZC3HC1	95	44.286	ENSORLG00000014409	zc3hc1	95	44.130	Oryzias_latipes
ENSCPBG00000017519	ZC3HC1	95	44.286	ENSORLG00020015874	zc3hc1	95	44.130	Oryzias_latipes_hni
ENSCPBG00000017519	ZC3HC1	95	44.082	ENSORLG00015014641	zc3hc1	95	43.927	Oryzias_latipes_hsok
ENSCPBG00000017519	ZC3HC1	97	44.559	ENSOMEG00000020604	zc3hc1	96	44.603	Oryzias_melastigma
ENSCPBG00000017519	ZC3HC1	97	44.559	ENSOMEG00000000215	zc3hc1	96	44.603	Oryzias_melastigma
ENSCPBG00000017519	ZC3HC1	100	61.706	ENSOGAG00000026193	ZC3HC1	96	62.757	Otolemur_garnettii
ENSCPBG00000017519	ZC3HC1	100	66.864	ENSOARG00000004907	ZC3HC1	95	67.689	Ovis_aries
ENSCPBG00000017519	ZC3HC1	99	67.793	ENSPPAG00000043172	ZC3HC1	96	68.866	Pan_paniscus
ENSCPBG00000017519	ZC3HC1	100	67.460	ENSPPRG00000001004	ZC3HC1	100	65.823	Panthera_pardus
ENSCPBG00000017519	ZC3HC1	100	67.659	ENSPTIG00000007823	ZC3HC1	100	66.034	Panthera_tigris_altaica
ENSCPBG00000017519	ZC3HC1	99	67.793	ENSPTRG00000019685	ZC3HC1	96	68.866	Pan_troglodytes
ENSCPBG00000017519	ZC3HC1	100	66.337	ENSPANG00000014229	ZC3HC1	97	67.325	Papio_anubis
ENSCPBG00000017519	ZC3HC1	96	48.676	ENSPKIG00000007172	zc3hc1	96	48.676	Paramormyrops_kingsleyae
ENSCPBG00000017519	ZC3HC1	96	77.618	ENSPSIG00000016646	ZC3HC1	97	78.093	Pelodiscus_sinensis
ENSCPBG00000017519	ZC3HC1	91	43.789	ENSPMGG00000003548	zc3hc1	97	39.796	Periophthalmus_magnuspinnatus
ENSCPBG00000017519	ZC3HC1	100	66.071	ENSPEMG00000000514	Zc3hc1	96	67.284	Peromyscus_maniculatus_bairdii
ENSCPBG00000017519	ZC3HC1	98	66.667	ENSPCIG00000020619	ZC3HC1	100	70.332	Phascolarctos_cinereus
ENSCPBG00000017519	ZC3HC1	96	42.944	ENSPFOG00000003466	zc3hc1	96	43.145	Poecilia_formosa
ENSCPBG00000017519	ZC3HC1	96	42.540	ENSPLAG00000022211	zc3hc1	96	42.742	Poecilia_latipinna
ENSCPBG00000017519	ZC3HC1	96	42.742	ENSPMEG00000001458	zc3hc1	96	42.944	Poecilia_mexicana
ENSCPBG00000017519	ZC3HC1	96	42.742	ENSPREG00000004004	zc3hc1	96	43.173	Poecilia_reticulata
ENSCPBG00000017519	ZC3HC1	99	61.386	ENSPPYG00000017998	ZC3HC1	96	62.218	Pongo_abelii
ENSCPBG00000017519	ZC3HC1	92	65.142	ENSPCAG00000001182	ZC3HC1	99	65.142	Procavia_capensis
ENSCPBG00000017519	ZC3HC1	100	67.262	ENSPCOG00000017354	ZC3HC1	96	68.107	Propithecus_coquereli
ENSCPBG00000017519	ZC3HC1	99	63.581	ENSPVAG00000003195	ZC3HC1	96	63.786	Pteropus_vampyrus
ENSCPBG00000017519	ZC3HC1	96	44.556	ENSPNYG00000020692	zc3hc1	96	44.578	Pundamilia_nyererei
ENSCPBG00000017519	ZC3HC1	89	45.572	ENSPNAG00000020746	zc3hc1	96	44.376	Pygocentrus_nattereri
ENSCPBG00000017519	ZC3HC1	97	64.476	ENSRNOG00000010154	Zc3hc1	96	64.476	Rattus_norvegicus
ENSCPBG00000017519	ZC3HC1	91	68.571	ENSRBIG00000029409	ZC3HC1	100	68.571	Rhinopithecus_bieti
ENSCPBG00000017519	ZC3HC1	100	67.262	ENSRROG00000041831	ZC3HC1	99	65.867	Rhinopithecus_roxellana
ENSCPBG00000017519	ZC3HC1	88	66.912	ENSSBOG00000032787	ZC3HC1	96	70.339	Saimiri_boliviensis_boliviensis
ENSCPBG00000017519	ZC3HC1	93	68.951	ENSSHAG00000002529	ZC3HC1	100	68.951	Sarcophilus_harrisii
ENSCPBG00000017519	ZC3HC1	97	51.423	ENSSFOG00015003667	zc3hc1	92	51.220	Scleropages_formosus
ENSCPBG00000017519	ZC3HC1	97	44.334	ENSSMAG00000000647	zc3hc1	87	44.533	Scophthalmus_maximus
ENSCPBG00000017519	ZC3HC1	96	45.272	ENSSDUG00000004241	zc3hc1	94	45.473	Seriola_dumerili
ENSCPBG00000017519	ZC3HC1	96	45.070	ENSSLDG00000025056	zc3hc1	94	45.272	Seriola_lalandi_dorsalis
ENSCPBG00000017519	ZC3HC1	97	61.100	ENSSARG00000012013	ZC3HC1	96	61.100	Sorex_araneus
ENSCPBG00000017519	ZC3HC1	88	67.568	ENSSPUG00000000778	ZC3HC1	88	67.568	Sphenodon_punctatus
ENSCPBG00000017519	ZC3HC1	97	44.444	ENSSPAG00000020041	zc3hc1	97	44.444	Stegastes_partitus
ENSCPBG00000017519	ZC3HC1	100	66.270	ENSSSCG00000016565	ZC3HC1	100	67.519	Sus_scrofa
ENSCPBG00000017519	ZC3HC1	95	44.191	ENSTRUG00000020077	zc3hc1	95	44.191	Takifugu_rubripes
ENSCPBG00000017519	ZC3HC1	95	44.792	ENSTNIG00000007585	zc3hc1	99	45.208	Tetraodon_nigroviridis
ENSCPBG00000017519	ZC3HC1	99	57.738	ENSTBEG00000005216	ZC3HC1	96	58.230	Tupaia_belangeri
ENSCPBG00000017519	ZC3HC1	96	67.983	ENSTTRG00000008458	ZC3HC1	100	67.983	Tursiops_truncatus
ENSCPBG00000017519	ZC3HC1	100	67.063	ENSUAMG00000020249	ZC3HC1	96	67.901	Ursus_americanus
ENSCPBG00000017519	ZC3HC1	100	66.667	ENSUMAG00000009268	ZC3HC1	96	67.490	Ursus_maritimus
ENSCPBG00000017519	ZC3HC1	78	60.411	ENSVPAG00000010846	ZC3HC1	73	62.069	Vicugna_pacos
ENSCPBG00000017519	ZC3HC1	95	67.708	ENSVVUG00000012386	ZC3HC1	95	68.615	Vulpes_vulpes
ENSCPBG00000017519	ZC3HC1	91	54.978	ENSXETG00000033900	zc3hc1	95	54.978	Xenopus_tropicalis
ENSCPBG00000017519	ZC3HC1	96	42.369	ENSXCOG00000013570	zc3hc1	96	42.570	Xiphophorus_couchianus
ENSCPBG00000017519	ZC3HC1	87	45.333	ENSXMAG00000010979	zc3hc1	94	45.556	Xiphophorus_maculatus