EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000017636 (Gene tree)
Gene ID: 101947829
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 12853 bases
Position: chrKK082921.1:11009791-11022643
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024796	PolyA_pol	PF01743.20	1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000029202	TRNT1-201	3286	-	ENSCPBP00000024796	438 (aa)	XP_005288584	UPI000389082F

Gene Model

Click here to download ENSCPBG00000017636's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017636	TRNT1	98	79.167	ENSG00000072756	TRNT1	99	79.167	Homo_sapiens
ENSCPBG00000017636	TRNT1	94	67.153	ENSAPOG00000013687	trnt1	96	67.153	Acanthochromis_polyacanthus
ENSCPBG00000017636	TRNT1	98	77.367	ENSAMEG00000014520	TRNT1	99	77.367	Ailuropoda_melanoleuca
ENSCPBG00000017636	TRNT1	96	67.780	ENSACIG00000021706	trnt1	98	67.780	Amphilophus_citrinellus
ENSCPBG00000017636	TRNT1	94	68.039	ENSAOCG00000024612	trnt1	97	68.039	Amphiprion_ocellaris
ENSCPBG00000017636	TRNT1	91	61.250	ENSAPEG00000022627	trnt1	93	61.250	Amphiprion_percula
ENSCPBG00000017636	TRNT1	92	69.975	ENSATEG00000008928	trnt1	99	69.975	Anabas_testudineus
ENSCPBG00000017636	TRNT1	88	83.204	ENSAPLG00000004258	TRNT1	96	83.204	Anas_platyrhynchos
ENSCPBG00000017636	TRNT1	94	82.195	ENSACAG00000005657	TRNT1	94	82.195	Anolis_carolinensis
ENSCPBG00000017636	TRNT1	98	78.241	ENSANAG00000024802	TRNT1	99	78.241	Aotus_nancymaae
ENSCPBG00000017636	TRNT1	93	68.382	ENSACLG00000022227	trnt1	96	68.382	Astatotilapia_calliptera
ENSCPBG00000017636	TRNT1	94	68.049	ENSAMXG00000003960	trnt1	95	68.215	Astyanax_mexicanus
ENSCPBG00000017636	TRNT1	93	80.392	ENSBTAG00000019534	TRNT1	94	80.392	Bos_taurus
ENSCPBG00000017636	TRNT1	92	44.524	WBGene00010089	hpo-31	94	44.524	Caenorhabditis_elegans
ENSCPBG00000017636	TRNT1	98	78.472	ENSCJAG00000015466	TRNT1	99	78.472	Callithrix_jacchus
ENSCPBG00000017636	TRNT1	95	79.426	ENSCAFG00000005985	TRNT1	96	79.426	Canis_familiaris
ENSCPBG00000017636	TRNT1	95	79.426	ENSCAFG00020014746	TRNT1	96	79.426	Canis_lupus_dingo
ENSCPBG00000017636	TRNT1	93	80.392	ENSCHIG00000007030	TRNT1	94	80.392	Capra_hircus
ENSCPBG00000017636	TRNT1	93	81.127	ENSTSYG00000013390	TRNT1	94	81.127	Carlito_syrichta
ENSCPBG00000017636	TRNT1	86	66.048	ENSCAPG00000006891	TRNT1	99	66.048	Cavia_aperea
ENSCPBG00000017636	TRNT1	93	79.853	ENSCPOG00000007849	TRNT1	94	79.853	Cavia_porcellus
ENSCPBG00000017636	TRNT1	98	75.870	ENSCCAG00000002919	TRNT1	100	80.050	Cebus_capucinus
ENSCPBG00000017636	TRNT1	98	79.350	ENSCATG00000031985	TRNT1	98	79.350	Cercocebus_atys
ENSCPBG00000017636	TRNT1	95	81.159	ENSCLAG00000005186	TRNT1	95	81.159	Chinchilla_lanigera
ENSCPBG00000017636	TRNT1	98	79.398	ENSCSAG00000011052	TRNT1	99	79.398	Chlorocebus_sabaeus
ENSCPBG00000017636	TRNT1	78	86.364	ENSCHOG00000005712	TRNT1	79	86.364	Choloepus_hoffmanni
ENSCPBG00000017636	TRNT1	91	45.658	ENSCING00000007069	-	99	45.658	Ciona_intestinalis
ENSCPBG00000017636	TRNT1	93	45.122	ENSCSAVG00000007494	-	96	45.122	Ciona_savignyi
ENSCPBG00000017636	TRNT1	98	79.398	ENSCANG00000039030	TRNT1	99	79.398	Colobus_angolensis_palliatus
ENSCPBG00000017636	TRNT1	94	81.707	ENSCGRG00001009998	Trnt1	94	81.707	Cricetulus_griseus_chok1gshd
ENSCPBG00000017636	TRNT1	94	81.707	ENSCGRG00000013410	Trnt1	94	81.707	Cricetulus_griseus_crigri
ENSCPBG00000017636	TRNT1	93	68.137	ENSCSEG00000008157	trnt1	97	67.766	Cynoglossus_semilaevis
ENSCPBG00000017636	TRNT1	93	70.098	ENSCVAG00000019770	trnt1	96	70.098	Cyprinodon_variegatus
ENSCPBG00000017636	TRNT1	99	67.277	ENSDARG00000075297	trnt1	99	67.277	Danio_rerio
ENSCPBG00000017636	TRNT1	93	82.555	ENSDNOG00000008837	TRNT1	94	82.555	Dasypus_novemcinctus
ENSCPBG00000017636	TRNT1	94	81.463	ENSDORG00000014035	Trnt1	94	81.463	Dipodomys_ordii
ENSCPBG00000017636	TRNT1	92	49.020	FBgn0037369	CG2100	84	49.020	Drosophila_melanogaster
ENSCPBG00000017636	TRNT1	55	83.817	ENSETEG00000018177	TRNT1	97	83.817	Echinops_telfairi
ENSCPBG00000017636	TRNT1	99	62.529	ENSEBUG00000012779	-	99	62.529	Eptatretus_burgeri
ENSCPBG00000017636	TRNT1	98	79.446	ENSEASG00005003577	TRNT1	99	79.446	Equus_asinus_asinus
ENSCPBG00000017636	TRNT1	98	79.677	ENSECAG00000014420	TRNT1	99	79.677	Equus_caballus
ENSCPBG00000017636	TRNT1	93	81.081	ENSEEUG00000009567	TRNT1	94	81.081	Erinaceus_europaeus
ENSCPBG00000017636	TRNT1	94	69.512	ENSELUG00000003802	trnt1	95	69.512	Esox_lucius
ENSCPBG00000017636	TRNT1	93	81.081	ENSFCAG00000026805	TRNT1	93	81.081	Felis_catus
ENSCPBG00000017636	TRNT1	88	81.039	ENSFALG00000013539	TRNT1	100	81.039	Ficedula_albicollis
ENSCPBG00000017636	TRNT1	93	81.572	ENSFDAG00000018412	TRNT1	94	81.572	Fukomys_damarensis
ENSCPBG00000017636	TRNT1	93	68.873	ENSFHEG00000019294	trnt1	96	68.873	Fundulus_heteroclitus
ENSCPBG00000017636	TRNT1	95	67.386	ENSGMOG00000007460	trnt1	98	67.386	Gadus_morhua
ENSCPBG00000017636	TRNT1	100	76.941	ENSGALG00000017368	TRNT1	100	76.941	Gallus_gallus
ENSCPBG00000017636	TRNT1	93	70.588	ENSGAFG00000008647	trnt1	96	70.588	Gambusia_affinis
ENSCPBG00000017636	TRNT1	93	67.892	ENSGACG00000011903	trnt1	96	68.586	Gasterosteus_aculeatus
ENSCPBG00000017636	TRNT1	100	96.364	ENSGAGG00000020942	TRNT1	100	96.364	Gopherus_agassizii
ENSCPBG00000017636	TRNT1	98	79.167	ENSGGOG00000015286	TRNT1	99	79.167	Gorilla_gorilla
ENSCPBG00000017636	TRNT1	93	68.382	ENSHBUG00000002797	trnt1	96	68.382	Haplochromis_burtoni
ENSCPBG00000017636	TRNT1	93	81.174	ENSHGLG00000003649	TRNT1	94	81.174	Heterocephalus_glaber_female
ENSCPBG00000017636	TRNT1	93	75.245	ENSHGLG00000000221	-	94	75.245	Heterocephalus_glaber_female
ENSCPBG00000017636	TRNT1	93	80.196	ENSHGLG00100016421	TRNT1	94	80.196	Heterocephalus_glaber_male
ENSCPBG00000017636	TRNT1	93	66.667	ENSHCOG00000010618	trnt1	96	66.667	Hippocampus_comes
ENSCPBG00000017636	TRNT1	93	67.726	ENSIPUG00000000971	trnt1	95	67.726	Ictalurus_punctatus
ENSCPBG00000017636	TRNT1	94	80.244	ENSSTOG00000000150	TRNT1	94	80.244	Ictidomys_tridecemlineatus
ENSCPBG00000017636	TRNT1	94	80.488	ENSJJAG00000018561	Trnt1	94	80.488	Jaculus_jaculus
ENSCPBG00000017636	TRNT1	93	68.873	ENSKMAG00000011307	trnt1	96	68.873	Kryptolebias_marmoratus
ENSCPBG00000017636	TRNT1	96	61.466	ENSLBEG00000019457	trnt1	97	61.466	Labrus_bergylta
ENSCPBG00000017636	TRNT1	94	75.854	ENSLACG00000013227	TRNT1	94	75.854	Latimeria_chalumnae
ENSCPBG00000017636	TRNT1	100	69.406	ENSLOCG00000011105	trnt1	99	69.406	Lepisosteus_oculatus
ENSCPBG00000017636	TRNT1	93	82.555	ENSLAFG00000023191	TRNT1	94	82.555	Loxodonta_africana
ENSCPBG00000017636	TRNT1	98	79.350	ENSMFAG00000045113	TRNT1	98	79.350	Macaca_fascicularis
ENSCPBG00000017636	TRNT1	98	79.350	ENSMMUG00000017983	TRNT1	98	79.350	Macaca_mulatta
ENSCPBG00000017636	TRNT1	98	79.350	ENSMNEG00000037805	TRNT1	98	79.350	Macaca_nemestrina
ENSCPBG00000017636	TRNT1	87	83.246	ENSMLEG00000033671	TRNT1	99	83.246	Mandrillus_leucophaeus
ENSCPBG00000017636	TRNT1	96	67.303	ENSMAMG00000023401	trnt1	98	67.303	Mastacembelus_armatus
ENSCPBG00000017636	TRNT1	93	68.382	ENSMZEG00005009141	trnt1	96	68.382	Maylandia_zebra
ENSCPBG00000017636	TRNT1	73	80.997	ENSMGAG00000009971	TRNT1	100	80.997	Meleagris_gallopavo
ENSCPBG00000017636	TRNT1	99	78.341	ENSMAUG00000020707	Trnt1	100	78.341	Mesocricetus_auratus
ENSCPBG00000017636	TRNT1	93	82.152	ENSMICG00000016615	TRNT1	94	82.152	Microcebus_murinus
ENSCPBG00000017636	TRNT1	94	81.707	ENSMOCG00000004539	Trnt1	94	81.707	Microtus_ochrogaster
ENSCPBG00000017636	TRNT1	99	65.826	ENSMMOG00000010742	trnt1	99	65.826	Mola_mola
ENSCPBG00000017636	TRNT1	95	81.205	ENSMODG00000004368	TRNT1	96	81.205	Monodelphis_domestica
ENSCPBG00000017636	TRNT1	93	67.402	ENSMALG00000008376	trnt1	95	67.402	Monopterus_albus
ENSCPBG00000017636	TRNT1	94	80.976	MGP_CAROLIEiJ_G0028698	Trnt1	94	80.976	Mus_caroli
ENSCPBG00000017636	TRNT1	94	80.976	ENSMUSG00000013736	Trnt1	94	80.976	Mus_musculus
ENSCPBG00000017636	TRNT1	94	81.707	MGP_PahariEiJ_G0022449	Trnt1	88	88.268	Mus_pahari
ENSCPBG00000017636	TRNT1	94	81.220	MGP_SPRETEiJ_G0029726	Trnt1	94	81.220	Mus_spretus
ENSCPBG00000017636	TRNT1	93	81.081	ENSMPUG00000017017	TRNT1	93	81.081	Mustela_putorius_furo
ENSCPBG00000017636	TRNT1	88	79.481	ENSMLUG00000011864	TRNT1	99	79.481	Myotis_lucifugus
ENSCPBG00000017636	TRNT1	94	80.976	ENSNGAG00000000537	Trnt1	94	80.976	Nannospalax_galili
ENSCPBG00000017636	TRNT1	75	67.988	ENSNBRG00000023606	trnt1	95	67.988	Neolamprologus_brichardi
ENSCPBG00000017636	TRNT1	93	82.598	ENSNLEG00000003226	TRNT1	94	82.598	Nomascus_leucogenys
ENSCPBG00000017636	TRNT1	95	80.241	ENSMEUG00000004684	TRNT1	96	80.241	Notamacropus_eugenii
ENSCPBG00000017636	TRNT1	87	72.846	ENSOPRG00000015067	TRNT1	99	72.846	Ochotona_princeps
ENSCPBG00000017636	TRNT1	93	82.064	ENSODEG00000007597	TRNT1	94	82.064	Octodon_degus
ENSCPBG00000017636	TRNT1	99	65.982	ENSONIG00000020273	trnt1	98	65.982	Oreochromis_niloticus
ENSCPBG00000017636	TRNT1	93	77.586	ENSOANG00000007514	TRNT1	94	77.586	Ornithorhynchus_anatinus
ENSCPBG00000017636	TRNT1	98	74.884	ENSOCUG00000008580	TRNT1	99	74.884	Oryctolagus_cuniculus
ENSCPBG00000017636	TRNT1	95	67.703	ENSORLG00000003165	trnt1	99	67.703	Oryzias_latipes
ENSCPBG00000017636	TRNT1	95	67.943	ENSORLG00020022060	trnt1	99	67.943	Oryzias_latipes_hni
ENSCPBG00000017636	TRNT1	95	67.225	ENSORLG00015018915	trnt1	98	67.225	Oryzias_latipes_hsok
ENSCPBG00000017636	TRNT1	94	67.397	ENSOMEG00000003331	trnt1	97	67.397	Oryzias_melastigma
ENSCPBG00000017636	TRNT1	93	80.392	ENSOARG00000008631	TRNT1	94	80.392	Ovis_aries
ENSCPBG00000017636	TRNT1	98	79.167	ENSPPAG00000043566	TRNT1	99	79.167	Pan_paniscus
ENSCPBG00000017636	TRNT1	98	77.262	ENSPPRG00000001327	TRNT1	99	77.262	Panthera_pardus
ENSCPBG00000017636	TRNT1	93	80.835	ENSPTIG00000011448	TRNT1	93	80.835	Panthera_tigris_altaica
ENSCPBG00000017636	TRNT1	98	79.167	ENSPTRG00000014564	TRNT1	99	79.167	Pan_troglodytes
ENSCPBG00000017636	TRNT1	98	79.350	ENSPANG00000025944	TRNT1	98	79.350	Papio_anubis
ENSCPBG00000017636	TRNT1	99	67.735	ENSPKIG00000020015	trnt1	99	67.735	Paramormyrops_kingsleyae
ENSCPBG00000017636	TRNT1	91	91.688	ENSPSIG00000017356	TRNT1	99	94.429	Pelodiscus_sinensis
ENSCPBG00000017636	TRNT1	93	67.892	ENSPMGG00000008888	trnt1	94	67.892	Periophthalmus_magnuspinnatus
ENSCPBG00000017636	TRNT1	99	78.111	ENSPEMG00000019845	Trnt1	100	78.111	Peromyscus_maniculatus_bairdii
ENSCPBG00000017636	TRNT1	95	80.964	ENSPCIG00000030436	TRNT1	96	80.964	Phascolarctos_cinereus
ENSCPBG00000017636	TRNT1	93	70.343	ENSPFOG00000006194	trnt1	96	70.343	Poecilia_formosa
ENSCPBG00000017636	TRNT1	93	70.343	ENSPLAG00000015623	trnt1	99	70.471	Poecilia_latipinna
ENSCPBG00000017636	TRNT1	93	70.098	ENSPMEG00000012216	trnt1	99	70.223	Poecilia_mexicana
ENSCPBG00000017636	TRNT1	93	70.098	ENSPREG00000021470	trnt1	96	70.098	Poecilia_reticulata
ENSCPBG00000017636	TRNT1	98	79.630	ENSPPYG00000013702	TRNT1	99	79.630	Pongo_abelii
ENSCPBG00000017636	TRNT1	87	81.984	ENSPCAG00000001951	TRNT1	100	81.984	Procavia_capensis
ENSCPBG00000017636	TRNT1	93	82.555	ENSPCOG00000022228	TRNT1	94	82.555	Propithecus_coquereli
ENSCPBG00000017636	TRNT1	88	80.208	ENSPVAG00000008784	TRNT1	100	80.208	Pteropus_vampyrus
ENSCPBG00000017636	TRNT1	93	68.382	ENSPNYG00000003120	trnt1	96	68.382	Pundamilia_nyererei
ENSCPBG00000017636	TRNT1	99	65.217	ENSPNAG00000000565	trnt1	99	65.217	Pygocentrus_nattereri
ENSCPBG00000017636	TRNT1	94	81.463	ENSRNOG00000006432	Trnt1	94	81.463	Rattus_norvegicus
ENSCPBG00000017636	TRNT1	98	77.778	ENSRBIG00000042632	TRNT1	99	77.778	Rhinopithecus_bieti
ENSCPBG00000017636	TRNT1	98	78.935	ENSRROG00000036866	TRNT1	99	78.935	Rhinopithecus_roxellana
ENSCPBG00000017636	TRNT1	98	78.241	ENSSBOG00000021208	TRNT1	99	78.241	Saimiri_boliviensis_boliviensis
ENSCPBG00000017636	TRNT1	93	81.618	ENSSHAG00000018861	TRNT1	94	81.618	Sarcophilus_harrisii
ENSCPBG00000017636	TRNT1	99	67.816	ENSSFOG00015020844	trnt1	99	67.816	Scleropages_formosus
ENSCPBG00000017636	TRNT1	93	69.118	ENSSMAG00000015432	trnt1	94	69.118	Scophthalmus_maximus
ENSCPBG00000017636	TRNT1	99	64.840	ENSSDUG00000012320	trnt1	100	64.840	Seriola_dumerili
ENSCPBG00000017636	TRNT1	55	64.854	ENSSLDG00000016463	-	91	64.854	Seriola_lalandi_dorsalis
ENSCPBG00000017636	TRNT1	99	64.840	ENSSLDG00000009325	trnt1	100	64.840	Seriola_lalandi_dorsalis
ENSCPBG00000017636	TRNT1	88	88.021	ENSSPUG00000014153	TRNT1	100	88.021	Sphenodon_punctatus
ENSCPBG00000017636	TRNT1	94	66.586	ENSSPAG00000021005	trnt1	97	66.586	Stegastes_partitus
ENSCPBG00000017636	TRNT1	93	80.882	ENSSSCG00000011529	TRNT1	94	80.882	Sus_scrofa
ENSCPBG00000017636	TRNT1	93	81.034	ENSTGUG00000010192	TRNT1	100	81.034	Taeniopygia_guttata
ENSCPBG00000017636	TRNT1	93	68.382	ENSTRUG00000001088	trnt1	96	68.382	Takifugu_rubripes
ENSCPBG00000017636	TRNT1	99	66.204	ENSTNIG00000007363	trnt1	99	66.204	Tetraodon_nigroviridis
ENSCPBG00000017636	TRNT1	55	70.124	ENSTBEG00000006367	TRNT1	80	70.124	Tupaia_belangeri
ENSCPBG00000017636	TRNT1	93	79.902	ENSTTRG00000007803	TRNT1	94	79.902	Tursiops_truncatus
ENSCPBG00000017636	TRNT1	98	77.958	ENSUAMG00000022574	TRNT1	99	77.958	Ursus_americanus
ENSCPBG00000017636	TRNT1	98	77.726	ENSUMAG00000024092	TRNT1	99	77.726	Ursus_maritimus
ENSCPBG00000017636	TRNT1	95	79.426	ENSVVUG00000012810	TRNT1	96	79.426	Vulpes_vulpes
ENSCPBG00000017636	TRNT1	96	65.083	ENSXETG00000025091	trnt1	99	66.914	Xenopus_tropicalis
ENSCPBG00000017636	TRNT1	93	70.588	ENSXCOG00000010150	trnt1	96	70.588	Xiphophorus_couchianus
ENSCPBG00000017636	TRNT1	93	70.343	ENSXMAG00000002227	trnt1	96	70.343	Xiphophorus_maculatus