EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017691 (Gene tree)
Gene ID: 101932948
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 20245 bases
Position: chrKK083106.1:641244-661488
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000024888	RRM_1	PF00076.22	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000029312	-	3450	XM_005289220	ENSCPBP00000024888	461 (aa)	XP_005289275	UPI000388BB7B

Gene Model

Click here to download ENSCPBG00000017691's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017691	-	66	62.879	ENSCPBG00000013322	CPSF6	95	43.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017691	-	72	56.395	ENSAPOG00000009771	-	95	43.002	Acanthochromis_polyacanthus
ENSCPBG00000017691	-	72	56.395	ENSAOCG00000024134	-	65	52.604	Amphiprion_ocellaris
ENSCPBG00000017691	-	72	54.857	ENSAPEG00000004361	-	95	43.002	Amphiprion_percula
ENSCPBG00000017691	-	72	56.322	ENSATEG00000014806	-	65	52.332	Anabas_testudineus
ENSCPBG00000017691	-	96	86.577	ENSDORG00000000998	-	97	86.577	Dipodomys_ordii
ENSCPBG00000017691	-	66	62.879	ENSGALG00000019355	CPSF6	95	43.333	Gallus_gallus