EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000017837 (Gene tree)
Gene ID: 101935986
Gene Symbol: SMPD2
Alias: ISC1|nSMase
Full Name: sphingomyelin phosphodiesterase 2
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 19245 bases
Position: chrKK083250.1:344946-364190
Accession: 11121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025066	Exo_endo_phos	PF03372.23	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000029534	SMPD2-201	1732	XM_024112293	ENSCPBP00000025066	406 (aa)	XP_008174017	UPI00046C023B
ENSCPBT00000029535	SMPD2-202	3302	-	ENSCPBP00000025067	404 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000017837's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic00600	Sphingolipid metabolism	KEGG
cpic01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017837's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017837	SMPD2	78	56.563	ENSG00000135587	SMPD2	95	44.845	Homo_sapiens
ENSCPBG00000017837	SMPD2	78	57.188	ENSAMEG00000016431	SMPD2	76	57.188	Ailuropoda_melanoleuca
ENSCPBG00000017837	SMPD2	98	58.065	ENSACIG00000010069	smpd2b	98	56.731	Amphilophus_citrinellus
ENSCPBG00000017837	SMPD2	99	55.663	ENSAOCG00000014544	smpd2b	94	55.663	Amphiprion_ocellaris
ENSCPBG00000017837	SMPD2	99	56.627	ENSAPEG00000023764	smpd2b	94	55.904	Amphiprion_percula
ENSCPBG00000017837	SMPD2	98	55.147	ENSATEG00000025113	smpd2b	93	55.147	Anabas_testudineus
ENSCPBG00000017837	SMPD2	96	71.867	ENSACAG00000009270	SMPD2	97	71.867	Anolis_carolinensis
ENSCPBG00000017837	SMPD2	78	57.500	ENSANAG00000028732	SMPD2	76	57.500	Aotus_nancymaae
ENSCPBG00000017837	SMPD2	99	55.181	ENSACLG00000022892	smpd2b	94	55.181	Astatotilapia_calliptera
ENSCPBG00000017837	SMPD2	99	53.659	ENSAMXG00000013614	smpd2b	95	53.415	Astyanax_mexicanus
ENSCPBG00000017837	SMPD2	77	57.325	ENSBTAG00000008145	SMPD2	51	57.325	Bos_taurus
ENSCPBG00000017837	SMPD2	97	36.580	WBGene00012105	T27F6.6	72	40.823	Caenorhabditis_elegans
ENSCPBG00000017837	SMPD2	78	57.500	ENSCJAG00000005756	SMPD2	76	57.321	Callithrix_jacchus
ENSCPBG00000017837	SMPD2	78	56.875	ENSCAFG00000003816	SMPD2	76	56.875	Canis_familiaris
ENSCPBG00000017837	SMPD2	78	55.763	ENSCHIG00000022563	SMPD2	76	55.763	Capra_hircus
ENSCPBG00000017837	SMPD2	77	58.044	ENSTSYG00000008525	SMPD2	76	57.812	Carlito_syrichta
ENSCPBG00000017837	SMPD2	60	57.025	ENSCAPG00000008057	SMPD2	69	57.025	Cavia_aperea
ENSCPBG00000017837	SMPD2	78	57.500	ENSCPOG00000003102	SMPD2	75	57.321	Cavia_porcellus
ENSCPBG00000017837	SMPD2	78	57.812	ENSCCAG00000036357	SMPD2	76	57.632	Cebus_capucinus
ENSCPBG00000017837	SMPD2	78	57.188	ENSCATG00000015266	SMPD2	76	57.009	Cercocebus_atys
ENSCPBG00000017837	SMPD2	69	59.929	ENSCLAG00000009948	SMPD2	62	59.929	Chinchilla_lanigera
ENSCPBG00000017837	SMPD2	78	56.875	ENSCSAG00000015322	SMPD2	76	56.698	Chlorocebus_sabaeus
ENSCPBG00000017837	SMPD2	78	56.698	ENSCANG00000029491	SMPD2	76	56.698	Colobus_angolensis_palliatus
ENSCPBG00000017837	SMPD2	99	50.611	ENSCGRG00001019999	Smpd2	77	58.879	Cricetulus_griseus_chok1gshd
ENSCPBG00000017837	SMPD2	99	50.611	ENSCGRG00000008928	Smpd2	77	58.879	Cricetulus_griseus_crigri
ENSCPBG00000017837	SMPD2	98	54.902	ENSCSEG00000016030	smpd2b	93	54.699	Cynoglossus_semilaevis
ENSCPBG00000017837	SMPD2	98	55.419	ENSCVAG00000020815	smpd2b	92	55.419	Cyprinodon_variegatus
ENSCPBG00000017837	SMPD2	99	56.650	ENSDARG00000052701	smpd2b	94	56.650	Danio_rerio
ENSCPBG00000017837	SMPD2	99	50.873	ENSDARG00000040523	smpd2a	92	50.990	Danio_rerio
ENSCPBG00000017837	SMPD2	78	60.000	ENSDNOG00000003948	SMPD2	75	60.000	Dasypus_novemcinctus
ENSCPBG00000017837	SMPD2	78	56.563	ENSDORG00000006485	Smpd2	76	56.563	Dipodomys_ordii
ENSCPBG00000017837	SMPD2	67	38.989	FBgn0035421	CG12034	64	38.276	Drosophila_melanogaster
ENSCPBG00000017837	SMPD2	98	51.232	ENSEBUG00000002962	smpd2b	95	51.478	Eptatretus_burgeri
ENSCPBG00000017837	SMPD2	78	57.009	ENSEASG00005006484	SMPD2	76	57.009	Equus_asinus_asinus
ENSCPBG00000017837	SMPD2	78	57.321	ENSECAG00000016972	SMPD2	76	57.321	Equus_caballus
ENSCPBG00000017837	SMPD2	99	56.901	ENSELUG00000021534	smpd2b	92	57.317	Esox_lucius
ENSCPBG00000017837	SMPD2	78	57.944	ENSFCAG00000006358	SMPD2	76	57.944	Felis_catus
ENSCPBG00000017837	SMPD2	99	70.750	ENSFALG00000003639	SMPD2	98	70.750	Ficedula_albicollis
ENSCPBG00000017837	SMPD2	97	56.436	ENSFHEG00000017395	smpd2b	92	56.436	Fundulus_heteroclitus
ENSCPBG00000017837	SMPD2	98	48.500	ENSGMOG00000015239	smpd2b	94	48.500	Gadus_morhua
ENSCPBG00000017837	SMPD2	99	69.500	ENSGALG00000033245	SMPD2	98	69.500	Gallus_gallus
ENSCPBG00000017837	SMPD2	98	55.172	ENSGAFG00000016345	smpd2b	92	55.172	Gambusia_affinis
ENSCPBG00000017837	SMPD2	99	56.204	ENSGACG00000005132	smpd2b	95	56.204	Gasterosteus_aculeatus
ENSCPBG00000017837	SMPD2	100	94.377	ENSGAGG00000023942	SMPD2	100	94.377	Gopherus_agassizii
ENSCPBG00000017837	SMPD2	78	56.563	ENSGGOG00000003394	SMPD2	76	56.563	Gorilla_gorilla
ENSCPBG00000017837	SMPD2	78	55.625	ENSHGLG00000000226	SMPD2	76	55.625	Heterocephalus_glaber_female
ENSCPBG00000017837	SMPD2	78	55.625	ENSHGLG00100016698	SMPD2	76	55.625	Heterocephalus_glaber_male
ENSCPBG00000017837	SMPD2	100	53.253	ENSHCOG00000001358	smpd2b	96	53.253	Hippocampus_comes
ENSCPBG00000017837	SMPD2	98	46.782	ENSIPUG00000017284	smpd2a	93	46.115	Ictalurus_punctatus
ENSCPBG00000017837	SMPD2	99	53.941	ENSIPUG00000024794	smpd2b	95	53.941	Ictalurus_punctatus
ENSCPBG00000017837	SMPD2	78	56.250	ENSSTOG00000028661	SMPD2	77	56.075	Ictidomys_tridecemlineatus
ENSCPBG00000017837	SMPD2	82	55.988	ENSJJAG00000019368	Smpd2	75	57.778	Jaculus_jaculus
ENSCPBG00000017837	SMPD2	99	56.311	ENSKMAG00000015753	smpd2b	94	56.311	Kryptolebias_marmoratus
ENSCPBG00000017837	SMPD2	98	54.863	ENSLBEG00000024878	smpd2b	93	54.863	Labrus_bergylta
ENSCPBG00000017837	SMPD2	99	62.500	ENSLACG00000016351	smpd2b	97	62.500	Latimeria_chalumnae
ENSCPBG00000017837	SMPD2	98	58.955	ENSLOCG00000009741	smpd2b	93	58.809	Lepisosteus_oculatus
ENSCPBG00000017837	SMPD2	78	53.106	ENSLAFG00000003298	SMPD2	77	53.106	Loxodonta_africana
ENSCPBG00000017837	SMPD2	78	57.188	ENSMFAG00000033236	SMPD2	76	57.188	Macaca_fascicularis
ENSCPBG00000017837	SMPD2	78	57.188	ENSMNEG00000042401	SMPD2	76	57.188	Macaca_nemestrina
ENSCPBG00000017837	SMPD2	66	56.827	ENSMLEG00000039457	SMPD2	72	56.827	Mandrillus_leucophaeus
ENSCPBG00000017837	SMPD2	99	56.386	ENSMAMG00000004710	smpd2b	94	56.386	Mastacembelus_armatus
ENSCPBG00000017837	SMPD2	99	55.181	ENSMZEG00005002958	smpd2b	94	55.181	Maylandia_zebra
ENSCPBG00000017837	SMPD2	99	67.581	ENSMGAG00000006821	SMPD2	98	67.581	Meleagris_gallopavo
ENSCPBG00000017837	SMPD2	78	57.944	ENSMAUG00000008721	Smpd2	77	57.944	Mesocricetus_auratus
ENSCPBG00000017837	SMPD2	78	57.188	ENSMICG00000014442	SMPD2	76	57.188	Microcebus_murinus
ENSCPBG00000017837	SMPD2	78	57.321	ENSMOCG00000019666	Smpd2	78	57.321	Microtus_ochrogaster
ENSCPBG00000017837	SMPD2	97	57.286	ENSMMOG00000012679	smpd2b	92	57.286	Mola_mola
ENSCPBG00000017837	SMPD2	98	49.275	ENSMODG00000017971	SMPD2	93	49.275	Monodelphis_domestica
ENSCPBG00000017837	SMPD2	99	56.490	ENSMALG00000000267	smpd2b	99	56.490	Monopterus_albus
ENSCPBG00000017837	SMPD2	78	57.500	MGP_CAROLIEiJ_G0015268	Smpd2	76	57.500	Mus_caroli
ENSCPBG00000017837	SMPD2	78	58.125	ENSMUSG00000019822	Smpd2	76	58.125	Mus_musculus
ENSCPBG00000017837	SMPD2	78	57.632	MGP_PahariEiJ_G0030686	Smpd2	77	57.632	Mus_pahari
ENSCPBG00000017837	SMPD2	97	50.503	MGP_SPRETEiJ_G0016077	Smpd2	79	56.970	Mus_spretus
ENSCPBG00000017837	SMPD2	78	57.680	ENSMPUG00000010005	SMPD2	76	57.680	Mustela_putorius_furo
ENSCPBG00000017837	SMPD2	76	59.744	ENSMLUG00000003793	SMPD2	74	59.744	Myotis_lucifugus
ENSCPBG00000017837	SMPD2	60	63.786	ENSNGAG00000013670	Smpd2	92	63.786	Nannospalax_galili
ENSCPBG00000017837	SMPD2	96	55.112	ENSNBRG00000008403	smpd2b	92	55.250	Neolamprologus_brichardi
ENSCPBG00000017837	SMPD2	78	57.321	ENSNLEG00000012570	SMPD2	76	57.321	Nomascus_leucogenys
ENSCPBG00000017837	SMPD2	98	47.880	ENSMEUG00000004602	SMPD2	93	47.382	Notamacropus_eugenii
ENSCPBG00000017837	SMPD2	78	55.000	ENSOPRG00000012612	SMPD2	75	55.000	Ochotona_princeps
ENSCPBG00000017837	SMPD2	98	55.501	ENSONIG00000014702	smpd2b	92	55.501	Oreochromis_niloticus
ENSCPBG00000017837	SMPD2	78	56.698	ENSOCUG00000008607	SMPD2	76	56.698	Oryctolagus_cuniculus
ENSCPBG00000017837	SMPD2	98	55.528	ENSORLG00000006334	smpd2b	92	55.528	Oryzias_latipes
ENSCPBG00000017837	SMPD2	98	55.037	ENSORLG00020015231	smpd2b	92	55.037	Oryzias_latipes_hni
ENSCPBG00000017837	SMPD2	98	55.283	ENSORLG00015010424	smpd2b	94	55.072	Oryzias_latipes_hsok
ENSCPBG00000017837	SMPD2	97	57.320	ENSOMEG00000016121	smpd2b	93	57.073	Oryzias_melastigma
ENSCPBG00000017837	SMPD2	98	51.358	ENSOGAG00000015505	SMPD2	77	58.104	Otolemur_garnettii
ENSCPBG00000017837	SMPD2	78	51.692	ENSOARG00000010409	SMPD2	76	51.692	Ovis_aries
ENSCPBG00000017837	SMPD2	78	56.875	ENSPPAG00000031363	SMPD2	76	56.875	Pan_paniscus
ENSCPBG00000017837	SMPD2	78	57.321	ENSPPRG00000000099	SMPD2	76	57.321	Panthera_pardus
ENSCPBG00000017837	SMPD2	78	57.500	ENSPTIG00000008954	SMPD2	76	57.500	Panthera_tigris_altaica
ENSCPBG00000017837	SMPD2	78	56.875	ENSPTRG00000018484	SMPD2	76	56.875	Pan_troglodytes
ENSCPBG00000017837	SMPD2	78	57.188	ENSPANG00000024480	SMPD2	76	57.188	Papio_anubis
ENSCPBG00000017837	SMPD2	99	56.829	ENSPKIG00000011322	smpd2a	91	56.829	Paramormyrops_kingsleyae
ENSCPBG00000017837	SMPD2	95	55.897	ENSPMGG00000000230	smpd2b	94	56.331	Periophthalmus_magnuspinnatus
ENSCPBG00000017837	SMPD2	77	60.317	ENSPEMG00000018109	Smpd2	77	60.317	Peromyscus_maniculatus_bairdii
ENSCPBG00000017837	SMPD2	78	55.836	ENSPMAG00000002460	smpd2b	91	55.836	Petromyzon_marinus
ENSCPBG00000017837	SMPD2	98	51.724	ENSPCIG00000005984	SMPD2	93	51.232	Phascolarctos_cinereus
ENSCPBG00000017837	SMPD2	98	55.419	ENSPFOG00000014164	smpd2b	92	55.419	Poecilia_formosa
ENSCPBG00000017837	SMPD2	98	55.419	ENSPLAG00000014950	smpd2b	92	55.419	Poecilia_latipinna
ENSCPBG00000017837	SMPD2	98	55.419	ENSPMEG00000002286	smpd2b	92	55.419	Poecilia_mexicana
ENSCPBG00000017837	SMPD2	98	55.419	ENSPREG00000012181	smpd2b	92	55.419	Poecilia_reticulata
ENSCPBG00000017837	SMPD2	77	57.778	ENSPPYG00000016908	-	55	57.778	Pongo_abelii
ENSCPBG00000017837	SMPD2	78	55.937	ENSPCAG00000011808	SMPD2	77	55.937	Procavia_capensis
ENSCPBG00000017837	SMPD2	78	57.812	ENSPCOG00000001714	SMPD2	76	57.812	Propithecus_coquereli
ENSCPBG00000017837	SMPD2	94	51.688	ENSPVAG00000006556	SMPD2	74	57.325	Pteropus_vampyrus
ENSCPBG00000017837	SMPD2	99	55.774	ENSPNYG00000005567	smpd2b	94	55.774	Pundamilia_nyererei
ENSCPBG00000017837	SMPD2	100	54.940	ENSPNAG00000007986	smpd2b	94	54.940	Pygocentrus_nattereri
ENSCPBG00000017837	SMPD2	78	58.750	ENSRNOG00000000306	Smpd2	76	58.750	Rattus_norvegicus
ENSCPBG00000017837	SMPD2	78	57.500	ENSRBIG00000033388	SMPD2	76	57.321	Rhinopithecus_bieti
ENSCPBG00000017837	SMPD2	78	57.188	ENSRROG00000037705	SMPD2	76	57.009	Rhinopithecus_roxellana
ENSCPBG00000017837	SMPD2	78	57.188	ENSSBOG00000033929	SMPD2	76	57.188	Saimiri_boliviensis_boliviensis
ENSCPBG00000017837	SMPD2	99	56.311	ENSSFOG00015022890	smpd2	94	56.311	Scleropages_formosus
ENSCPBG00000017837	SMPD2	98	56.373	ENSSMAG00000008963	smpd2b	93	56.373	Scophthalmus_maximus
ENSCPBG00000017837	SMPD2	97	56.511	ENSSDUG00000000098	smpd2b	92	56.511	Seriola_dumerili
ENSCPBG00000017837	SMPD2	97	57.789	ENSSLDG00000009497	smpd2b	92	57.789	Seriola_lalandi_dorsalis
ENSCPBG00000017837	SMPD2	77	56.782	ENSSARG00000006192	SMPD2	75	56.782	Sorex_araneus
ENSCPBG00000017837	SMPD2	99	78.803	ENSSPUG00000013852	SMPD2	98	78.803	Sphenodon_punctatus
ENSCPBG00000017837	SMPD2	99	55.181	ENSSPAG00000001844	smpd2b	94	55.181	Stegastes_partitus
ENSCPBG00000017837	SMPD2	77	57.325	ENSSSCG00000004408	SMPD2	74	57.325	Sus_scrofa
ENSCPBG00000017837	SMPD2	99	67.750	ENSTGUG00000001713	SMPD2	99	67.750	Taeniopygia_guttata
ENSCPBG00000017837	SMPD2	99	57.178	ENSTRUG00000025701	smpd2b	95	57.178	Takifugu_rubripes
ENSCPBG00000017837	SMPD2	98	57.750	ENSTNIG00000018297	smpd2b	98	57.750	Tetraodon_nigroviridis
ENSCPBG00000017837	SMPD2	77	58.675	ENSTBEG00000009336	SMPD2	75	58.675	Tupaia_belangeri
ENSCPBG00000017837	SMPD2	77	53.628	ENSTTRG00000004183	SMPD2	75	53.628	Tursiops_truncatus
ENSCPBG00000017837	SMPD2	78	57.812	ENSUAMG00000018011	SMPD2	76	57.632	Ursus_americanus
ENSCPBG00000017837	SMPD2	67	57.509	ENSUMAG00000025505	SMPD2	67	57.509	Ursus_maritimus
ENSCPBG00000017837	SMPD2	98	48.995	ENSXETG00000000421	smpd2	99	49.123	Xenopus_tropicalis
ENSCPBG00000017837	SMPD2	95	55.527	ENSXCOG00000015987	smpd2b	92	55.527	Xiphophorus_couchianus
ENSCPBG00000017837	SMPD2	98	54.680	ENSXMAG00000018088	smpd2b	92	54.680	Xiphophorus_maculatus