EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017909 (Gene tree)
Gene ID: 101938980
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 5239 bases
Position: chrKK083106.1:1274096-1279334
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025172	zf-met	PF12874.7	7.3e-06	1	1
ENSCPBP00000025172	PAP_assoc	PF03828.19	1.2e-10	1	1
ENSCPBP00000025172	RRM_1	PF00076.22	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000029664	-	2439	-	ENSCPBP00000025172	766 (aa)	XP_008172327	UPI00046C2B5E

Gene Model

Click here to download ENSCPBG00000017909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017909	-	66	30.784	ENSCPBG00000015871	MTPAP	90	30.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017909	-	61	61.961	ENSG00000149016	TUT1	90	67.778	Homo_sapiens
ENSCPBG00000017909	-	99	47.081	ENSAPOG00000016423	tut1	99	47.081	Acanthochromis_polyacanthus
ENSCPBG00000017909	-	76	60.930	ENSAMEG00000006723	-	85	47.121	Ailuropoda_melanoleuca
ENSCPBG00000017909	-	99	47.342	ENSACIG00000000948	tut1	99	47.342	Amphilophus_citrinellus
ENSCPBG00000017909	-	99	47.395	ENSAOCG00000021912	tut1	99	47.395	Amphiprion_ocellaris
ENSCPBG00000017909	-	99	48.416	ENSAPEG00000005144	tut1	99	48.416	Amphiprion_percula
ENSCPBG00000017909	-	99	46.724	ENSATEG00000014590	tut1	98	47.184	Anabas_testudineus
ENSCPBG00000017909	-	82	61.569	ENSANAG00000029063	-	89	48.036	Aotus_nancymaae
ENSCPBG00000017909	-	99	47.886	ENSACLG00000013406	tut1	99	47.886	Astatotilapia_calliptera
ENSCPBG00000017909	-	99	46.183	ENSAMXG00000042139	tut1	99	46.809	Astyanax_mexicanus
ENSCPBG00000017909	-	90	60.465	ENSBTAG00000011846	TUT1	89	56.809	Bos_taurus
ENSCPBG00000017909	-	76	61.569	ENSCJAG00000033294	-	81	56.173	Callithrix_jacchus
ENSCPBG00000017909	-	76	61.961	ENSCAFG00000015822	TUT1	74	56.923	Canis_familiaris
ENSCPBG00000017909	-	76	61.961	ENSCAFG00020013039	-	74	56.923	Canis_lupus_dingo
ENSCPBG00000017909	-	97	60.930	ENSCHIG00000006765	-	90	57.198	Capra_hircus
ENSCPBG00000017909	-	67	57.798	ENSTSYG00000000147	-	77	50.912	Carlito_syrichta
ENSCPBG00000017909	-	74	52.484	ENSCAPG00000013001	-	74	54.741	Cavia_aperea
ENSCPBG00000017909	-	99	53.285	ENSCPOG00000014281	-	92	53.285	Cavia_porcellus
ENSCPBG00000017909	-	61	61.961	ENSCCAG00000018819	-	85	56.923	Cebus_capucinus
ENSCPBG00000017909	-	61	61.569	ENSCATG00000036770	-	95	48.343	Cercocebus_atys
ENSCPBG00000017909	-	96	56.809	ENSCLAG00000000215	-	89	56.809	Chinchilla_lanigera
ENSCPBG00000017909	-	51	61.961	ENSCSAG00000006566	-	99	45.439	Chlorocebus_sabaeus
ENSCPBG00000017909	-	68	46.939	ENSCHOG00000007746	-	54	48.214	Choloepus_hoffmanni
ENSCPBG00000017909	-	61	61.176	ENSCANG00000043244	-	81	48.042	Colobus_angolensis_palliatus
ENSCPBG00000017909	-	61	61.569	ENSCGRG00001017583	Tut1	99	42.011	Cricetulus_griseus_chok1gshd
ENSCPBG00000017909	-	61	61.569	ENSCGRG00000015008	Tut1	99	42.011	Cricetulus_griseus_crigri
ENSCPBG00000017909	-	99	47.236	ENSCSEG00000012807	tut1	98	47.362	Cynoglossus_semilaevis
ENSCPBG00000017909	-	99	46.809	ENSCVAG00000005396	tut1	99	47.059	Cyprinodon_variegatus
ENSCPBG00000017909	-	99	47.572	ENSDARG00000057321	tut1	99	47.572	Danio_rerio
ENSCPBG00000017909	-	93	62.500	ENSDNOG00000038908	-	89	58.527	Dasypus_novemcinctus
ENSCPBG00000017909	-	81	60.784	ENSDORG00000004018	Tut1	70	59.925	Dipodomys_ordii
ENSCPBG00000017909	-	99	42.199	ENSEBUG00000014170	tut1	95	41.962	Eptatretus_burgeri
ENSCPBG00000017909	-	81	62.353	ENSEASG00005007531	-	80	57.692	Equus_asinus_asinus
ENSCPBG00000017909	-	81	62.745	ENSECAG00000009471	-	78	58.140	Equus_caballus
ENSCPBG00000017909	-	84	60.674	ENSEEUG00000001238	-	86	52.444	Erinaceus_europaeus
ENSCPBG00000017909	-	99	48.005	ENSELUG00000011532	tut1	99	48.005	Esox_lucius
ENSCPBG00000017909	-	93	61.574	ENSFCAG00000008859	-	85	57.308	Felis_catus
ENSCPBG00000017909	-	99	36.186	ENSFDAG00000021131	-	99	36.186	Fukomys_damarensis
ENSCPBG00000017909	-	99	47.015	ENSFHEG00000006279	tut1	99	47.264	Fundulus_heteroclitus
ENSCPBG00000017909	-	99	48.101	ENSGMOG00000013378	tut1	99	47.793	Gadus_morhua
ENSCPBG00000017909	-	99	47.661	ENSGACG00000009956	tut1	99	47.661	Gasterosteus_aculeatus
ENSCPBG00000017909	-	100	90.256	ENSGAGG00000007912	-	99	90.256	Gopherus_agassizii
ENSCPBG00000017909	-	61	61.961	ENSGGOG00000013564	-	74	66.942	Gorilla_gorilla
ENSCPBG00000017909	-	99	47.637	ENSHBUG00000022855	tut1	99	47.637	Haplochromis_burtoni
ENSCPBG00000017909	-	98	57.692	ENSHGLG00000002742	-	89	57.692	Heterocephalus_glaber_female
ENSCPBG00000017909	-	98	57.692	ENSHGLG00100017588	-	89	57.692	Heterocephalus_glaber_male
ENSCPBG00000017909	-	99	46.809	ENSHCOG00000016358	tut1	98	47.184	Hippocampus_comes
ENSCPBG00000017909	-	99	47.696	ENSIPUG00000017671	tut1	99	47.945	Ictalurus_punctatus
ENSCPBG00000017909	-	81	61.961	ENSSTOG00000002859	-	89	57.308	Ictidomys_tridecemlineatus
ENSCPBG00000017909	-	78	60.930	ENSJJAG00000022329	Tut1	91	57.198	Jaculus_jaculus
ENSCPBG00000017909	-	99	46.592	ENSKMAG00000010023	tut1	99	47.037	Kryptolebias_marmoratus
ENSCPBG00000017909	-	99	45.205	ENSLBEG00000014969	tut1	98	45.363	Labrus_bergylta
ENSCPBG00000017909	-	99	55.909	ENSLACG00000011278	tut1	92	65.844	Latimeria_chalumnae
ENSCPBG00000017909	-	99	52.334	ENSLOCG00000013105	tut1	99	52.334	Lepisosteus_oculatus
ENSCPBG00000017909	-	76	62.353	ENSLAFG00000003340	-	71	60.619	Loxodonta_africana
ENSCPBG00000017909	-	61	61.569	ENSMFAG00000000912	-	95	47.892	Macaca_fascicularis
ENSCPBG00000017909	-	61	61.569	ENSMMUG00000006595	-	95	41.925	Macaca_mulatta
ENSCPBG00000017909	-	61	61.569	ENSMNEG00000029841	-	95	47.892	Macaca_nemestrina
ENSCPBG00000017909	-	61	61.961	ENSMLEG00000040498	-	95	48.042	Mandrillus_leucophaeus
ENSCPBG00000017909	-	99	46.824	ENSMAMG00000008173	tut1	98	47.118	Mastacembelus_armatus
ENSCPBG00000017909	-	99	47.886	ENSMZEG00005009777	tut1	99	47.886	Maylandia_zebra
ENSCPBG00000017909	-	70	62.037	ENSMICG00000009841	-	74	58.140	Microcebus_murinus
ENSCPBG00000017909	-	93	58.140	ENSMOCG00000015834	Tut1	89	55.253	Microtus_ochrogaster
ENSCPBG00000017909	-	99	47.494	ENSMMOG00000002589	tut1	98	47.494	Mola_mola
ENSCPBG00000017909	-	94	50.610	ENSMODG00000007710	-	99	44.170	Monodelphis_domestica
ENSCPBG00000017909	-	99	47.519	ENSMALG00000003624	tut1	99	47.270	Monopterus_albus
ENSCPBG00000017909	-	68	51.265	MGP_CAROLIEiJ_G0022670	Tut1	99	43.596	Mus_caroli
ENSCPBG00000017909	-	77	62.745	ENSMUSG00000071645	Tut1	86	61.435	Mus_musculus
ENSCPBG00000017909	-	61	63.137	MGP_PahariEiJ_G0014164	Tut1	86	61.883	Mus_pahari
ENSCPBG00000017909	-	77	61.961	MGP_SPRETEiJ_G0023583	Tut1	86	61.435	Mus_spretus
ENSCPBG00000017909	-	76	60.784	ENSMPUG00000013938	-	85	47.424	Mustela_putorius_furo
ENSCPBG00000017909	-	67	71.765	ENSMLUG00000000349	-	56	71.765	Myotis_lucifugus
ENSCPBG00000017909	-	67	63.529	ENSNGAG00000002988	Tut1	62	57.588	Nannospalax_galili
ENSCPBG00000017909	-	99	47.329	ENSNBRG00000022055	tut1	99	47.329	Neolamprologus_brichardi
ENSCPBG00000017909	-	61	61.961	ENSNLEG00000003780	-	74	66.942	Nomascus_leucogenys
ENSCPBG00000017909	-	82	68.675	ENSMEUG00000012756	-	78	67.857	Notamacropus_eugenii
ENSCPBG00000017909	-	54	59.364	ENSOPRG00000011835	-	69	46.516	Ochotona_princeps
ENSCPBG00000017909	-	99	42.135	ENSODEG00000002204	-	99	42.250	Octodon_degus
ENSCPBG00000017909	-	99	48.861	ENSONIG00000019913	tut1	99	48.861	Oreochromis_niloticus
ENSCPBG00000017909	-	81	61.176	ENSOCUG00000017215	-	82	51.930	Oryctolagus_cuniculus
ENSCPBG00000017909	-	99	45.932	ENSORLG00000004342	tut1	98	46.308	Oryzias_latipes
ENSCPBG00000017909	-	99	46.375	ENSORLG00015018834	tut1	98	46.625	Oryzias_latipes_hsok
ENSCPBG00000017909	-	99	47.771	ENSOMEG00000005129	tut1	98	47.771	Oryzias_melastigma
ENSCPBG00000017909	-	77	61.395	ENSOGAG00000000828	-	71	61.049	Otolemur_garnettii
ENSCPBG00000017909	-	90	60.930	ENSOARG00000015269	-	89	57.198	Ovis_aries
ENSCPBG00000017909	-	61	61.961	ENSPPAG00000037200	-	74	66.942	Pan_paniscus
ENSCPBG00000017909	-	85	61.574	ENSPPRG00000000257	-	89	57.752	Panthera_pardus
ENSCPBG00000017909	-	93	61.574	ENSPTIG00000017573	-	85	57.752	Panthera_tigris_altaica
ENSCPBG00000017909	-	61	61.961	ENSPTRG00000003770	TUT1	74	66.942	Pan_troglodytes
ENSCPBG00000017909	-	60	60.092	ENSPANG00000010908	-	75	45.181	Papio_anubis
ENSCPBG00000017909	-	99	50.611	ENSPKIG00000022062	tut1	99	50.611	Paramormyrops_kingsleyae
ENSCPBG00000017909	-	100	88.295	ENSPSIG00000004972	-	97	88.295	Pelodiscus_sinensis
ENSCPBG00000017909	-	99	46.506	ENSPMGG00000004299	tut1	98	46.506	Periophthalmus_magnuspinnatus
ENSCPBG00000017909	-	77	48.416	ENSPEMG00000018332	Tut1	99	42.094	Peromyscus_maniculatus_bairdii
ENSCPBG00000017909	-	88	45.897	ENSPMAG00000005825	tut1	99	45.341	Petromyzon_marinus
ENSCPBG00000017909	-	99	43.843	ENSPCIG00000017805	-	98	44.740	Phascolarctos_cinereus
ENSCPBG00000017909	-	99	47.462	ENSPFOG00000016195	tut1	99	47.462	Poecilia_formosa
ENSCPBG00000017909	-	99	47.389	ENSPLAG00000022064	tut1	99	47.389	Poecilia_latipinna
ENSCPBG00000017909	-	99	47.765	ENSPMEG00000019175	tut1	99	47.765	Poecilia_mexicana
ENSCPBG00000017909	-	99	47.402	ENSPREG00000020464	tut1	99	47.402	Poecilia_reticulata
ENSCPBG00000017909	-	76	61.574	ENSPPYG00000003162	-	74	57.308	Pongo_abelii
ENSCPBG00000017909	-	75	61.579	ENSPCAG00000002956	-	89	57.328	Procavia_capensis
ENSCPBG00000017909	-	63	61.574	ENSPCOG00000017464	-	68	59.420	Propithecus_coquereli
ENSCPBG00000017909	-	64	67.308	ENSPVAG00000003444	-	60	67.308	Pteropus_vampyrus
ENSCPBG00000017909	-	99	47.139	ENSPNYG00000018764	tut1	99	47.139	Pundamilia_nyererei
ENSCPBG00000017909	-	99	48.676	ENSPNAG00000011889	tut1	99	48.676	Pygocentrus_nattereri
ENSCPBG00000017909	-	61	62.353	ENSRNOG00000020047	Tut1	86	61.435	Rattus_norvegicus
ENSCPBG00000017909	-	70	60.092	ENSRBIG00000021240	-	91	46.888	Rhinopithecus_bieti
ENSCPBG00000017909	-	70	60.092	ENSRROG00000043315	-	91	46.888	Rhinopithecus_roxellana
ENSCPBG00000017909	-	61	61.961	ENSSBOG00000003827	-	89	57.198	Saimiri_boliviensis_boliviensis
ENSCPBG00000017909	-	89	62.105	ENSSHAG00000003368	-	86	63.636	Sarcophilus_harrisii
ENSCPBG00000017909	-	99	52.718	ENSSFOG00015005639	tut1	99	52.399	Scleropages_formosus
ENSCPBG00000017909	-	99	46.700	ENSSMAG00000011449	tut1	99	46.832	Scophthalmus_maximus
ENSCPBG00000017909	-	99	46.354	ENSSDUG00000003613	tut1	99	46.354	Seriola_dumerili
ENSCPBG00000017909	-	99	46.354	ENSSLDG00000022487	tut1	99	46.354	Seriola_lalandi_dorsalis
ENSCPBG00000017909	-	99	66.873	ENSSPUG00000008143	-	99	66.377	Sphenodon_punctatus
ENSCPBG00000017909	-	99	47.342	ENSSPAG00000023390	tut1	99	47.342	Stegastes_partitus
ENSCPBG00000017909	-	98	47.843	ENSTRUG00000016451	tut1	97	47.843	Takifugu_rubripes
ENSCPBG00000017909	-	77	49.674	ENSTNIG00000012852	tut1	99	49.674	Tetraodon_nigroviridis
ENSCPBG00000017909	-	61	61.860	ENSTTRG00000002460	-	59	63.229	Tursiops_truncatus
ENSCPBG00000017909	-	76	61.176	ENSUAMG00000027237	-	85	47.360	Ursus_americanus
ENSCPBG00000017909	-	76	61.176	ENSUMAG00000012710	-	85	47.360	Ursus_maritimus
ENSCPBG00000017909	-	61	60.648	ENSVPAG00000005413	-	74	59.664	Vicugna_pacos
ENSCPBG00000017909	-	76	61.961	ENSVVUG00000029882	-	74	56.538	Vulpes_vulpes
ENSCPBG00000017909	-	77	45.603	ENSXETG00000005640	tut1	82	45.603	Xenopus_tropicalis
ENSCPBG00000017909	-	51	49.522	ENSXCOG00000017824	tut1	90	49.522	Xiphophorus_couchianus
ENSCPBG00000017909	-	99	47.643	ENSXMAG00000027272	tut1	99	47.643	Xiphophorus_maculatus