EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000017963 (Gene tree)
Gene ID: 101944890
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 14863 bases
Position: chrKK083106.1:1448182-1463044
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025232	SAP	PF02037.27	3.4e-08	1	1
ENSCPBP00000025233	SAP	PF02037.27	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000029734	-	5061	XM_005289264	ENSCPBP00000025232	761 (aa)	XP_005289321	UPI000388D2F7
ENSCPBT00000029735	-	4588	-	ENSCPBP00000025233	761 (aa)	-	UPI000388D2F7

Gene Model

Click here to download ENSCPBG00000017963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000017963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000017963	-	78	51.717	ENSCPBG00000009415	HNRNPU	70	50.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000017963	-	80	81.848	ENSG00000214753	HNRNPUL2	100	76.285	Homo_sapiens
ENSCPBG00000017963	-	93	36.769	ENSAPOG00000005128	si:ch211-107m4.1	69	44.875	Acanthochromis_polyacanthus
ENSCPBG00000017963	-	84	36.707	ENSACIG00000022729	si:ch211-107m4.1	63	42.857	Amphilophus_citrinellus
ENSCPBG00000017963	-	80	73.611	ENSACAG00000000746	-	92	71.649	Anolis_carolinensis
ENSCPBG00000017963	-	80	81.686	ENSANAG00000027153	-	100	76.115	Aotus_nancymaae
ENSCPBG00000017963	-	90	37.159	ENSACLG00000018069	si:ch211-107m4.1	70	44.671	Astatotilapia_calliptera
ENSCPBG00000017963	-	96	37.485	ENSAMXG00000033712	si:ch211-107m4.1	64	44.094	Astyanax_mexicanus
ENSCPBG00000017963	-	79	82.295	ENSBTAG00000002510	HNRNPUL2	100	74.639	Bos_taurus
ENSCPBG00000017963	-	80	81.361	ENSCJAG00000018709	-	100	75.654	Callithrix_jacchus
ENSCPBG00000017963	-	81	81.090	ENSCAFG00000015686	-	100	75.921	Canis_familiaris
ENSCPBG00000017963	-	81	81.090	ENSCAFG00020013120	-	100	75.921	Canis_lupus_dingo
ENSCPBG00000017963	-	79	82.459	ENSCHIG00000020213	-	100	74.770	Capra_hircus
ENSCPBG00000017963	-	78	77.213	ENSCCAG00000037674	-	100	71.673	Cebus_capucinus
ENSCPBG00000017963	-	78	82.382	ENSCATG00000034588	-	100	75.948	Cercocebus_atys
ENSCPBG00000017963	-	78	82.324	ENSCSAG00000006701	-	96	75.885	Chlorocebus_sabaeus
ENSCPBG00000017963	-	97	75.936	ENSCGRG00001017076	Hnrnpul2	100	76.021	Cricetulus_griseus_chok1gshd
ENSCPBG00000017963	-	60	43.534	ENSCSEG00000005686	si:ch211-107m4.1	69	45.012	Cynoglossus_semilaevis
ENSCPBG00000017963	-	67	39.539	ENSCVAG00000006862	si:ch211-107m4.1	67	42.825	Cyprinodon_variegatus
ENSCPBG00000017963	-	94	38.503	ENSDARG00000056830	si:ch211-107m4.1	70	45.079	Danio_rerio
ENSCPBG00000017963	-	97	75.926	ENSDNOG00000006508	-	100	75.926	Dasypus_novemcinctus
ENSCPBG00000017963	-	82	80.190	ENSDORG00000008678	Hnrnpul2	100	74.866	Dipodomys_ordii
ENSCPBG00000017963	-	80	81.818	ENSEASG00005011347	-	100	76.184	Equus_asinus_asinus
ENSCPBG00000017963	-	80	81.818	ENSECAG00000020298	-	100	76.184	Equus_caballus
ENSCPBG00000017963	-	82	57.143	ENSELUG00000008134	si:ch211-107m4.1	67	57.143	Esox_lucius
ENSCPBG00000017963	-	81	80.899	ENSFCAG00000014766	-	100	75.889	Felis_catus
ENSCPBG00000017963	-	88	37.826	ENSFHEG00000014731	si:ch211-107m4.1	69	44.828	Fundulus_heteroclitus
ENSCPBG00000017963	-	91	37.500	ENSGAFG00000016579	si:ch211-107m4.1	71	41.509	Gambusia_affinis
ENSCPBG00000017963	-	99	98.816	ENSGAGG00000016818	-	96	98.816	Gopherus_agassizii
ENSCPBG00000017963	-	80	81.686	ENSGGOG00000011722	HNRNPUL2	100	75.885	Gorilla_gorilla
ENSCPBG00000017963	-	90	38.054	ENSHBUG00000013076	si:ch211-107m4.1	70	44.898	Haplochromis_burtoni
ENSCPBG00000017963	-	77	82.993	ENSHGLG00000003285	-	100	74.366	Heterocephalus_glaber_female
ENSCPBG00000017963	-	96	37.845	ENSIPUG00000009518	si:ch211-107m4.1	60	48.741	Ictalurus_punctatus
ENSCPBG00000017963	-	80	82.201	ENSSTOG00000004327	-	100	76.517	Ictidomys_tridecemlineatus
ENSCPBG00000017963	-	78	81.803	ENSJJAG00000011206	Hnrnpul2	100	75.494	Jaculus_jaculus
ENSCPBG00000017963	-	88	36.496	ENSKMAG00000003651	si:ch211-107m4.1	68	43.318	Kryptolebias_marmoratus
ENSCPBG00000017963	-	95	57.612	ENSLACG00000009304	-	100	56.883	Latimeria_chalumnae
ENSCPBG00000017963	-	97	75.532	ENSLAFG00000005377	-	100	75.164	Loxodonta_africana
ENSCPBG00000017963	-	78	82.382	ENSMFAG00000041014	-	100	75.948	Macaca_fascicularis
ENSCPBG00000017963	-	78	82.382	ENSMNEG00000036955	-	100	75.948	Macaca_nemestrina
ENSCPBG00000017963	-	96	35.753	ENSMAMG00000021489	si:ch211-107m4.1	76	39.366	Mastacembelus_armatus
ENSCPBG00000017963	-	90	37.159	ENSMZEG00005005136	si:ch211-107m4.1	70	44.671	Maylandia_zebra
ENSCPBG00000017963	-	97	76.502	ENSMAUG00000013163	Hnrnpul2	100	75.722	Mesocricetus_auratus
ENSCPBG00000017963	-	97	74.633	ENSMICG00000009943	-	100	74.766	Microcebus_murinus
ENSCPBG00000017963	-	86	87.264	ENSMOCG00000020000	Hnrnpul2	100	87.264	Microtus_ochrogaster
ENSCPBG00000017963	-	53	41.463	ENSMALG00000011564	si:ch211-107m4.1	70	42.105	Monopterus_albus
ENSCPBG00000017963	-	97	74.538	MGP_CAROLIEiJ_G0022656	Hnrnpul2	100	75.889	Mus_caroli
ENSCPBG00000017963	-	97	74.670	ENSMUSG00000071659	Hnrnpul2	100	75.758	Mus_musculus
ENSCPBG00000017963	-	97	74.406	MGP_PahariEiJ_G0014151	Hnrnpul2	100	75.626	Mus_pahari
ENSCPBG00000017963	-	97	74.670	MGP_SPRETEiJ_G0023569	Hnrnpul2	100	75.758	Mus_spretus
ENSCPBG00000017963	-	76	82.333	ENSMPUG00000013707	-	93	75.522	Mustela_putorius_furo
ENSCPBG00000017963	-	76	81.803	ENSMLUG00000000412	-	100	73.987	Myotis_lucifugus
ENSCPBG00000017963	-	78	82.382	ENSNGAG00000012005	Hnrnpul2	100	76.078	Nannospalax_galili
ENSCPBG00000017963	-	88	36.018	ENSNBRG00000000429	si:ch211-107m4.1	60	44.000	Neolamprologus_brichardi
ENSCPBG00000017963	-	77	84.524	ENSNLEG00000004077	-	100	74.771	Nomascus_leucogenys
ENSCPBG00000017963	-	84	38.415	ENSONIG00000005422	si:ch211-107m4.1	70	43.665	Oreochromis_niloticus
ENSCPBG00000017963	-	78	82.951	ENSOCUG00000009474	-	100	76.285	Oryctolagus_cuniculus
ENSCPBG00000017963	-	86	36.953	ENSORLG00000024574	si:ch211-107m4.1	86	36.216	Oryzias_latipes
ENSCPBG00000017963	-	58	43.694	ENSOMEG00000018153	si:ch211-107m4.1	68	43.779	Oryzias_melastigma
ENSCPBG00000017963	-	74	78.902	ENSOGAG00000003302	-	99	73.222	Otolemur_garnettii
ENSCPBG00000017963	-	79	82.730	ENSOARG00000016817	-	100	74.538	Ovis_aries
ENSCPBG00000017963	-	81	80.899	ENSPPRG00000006380	-	100	75.889	Panthera_pardus
ENSCPBG00000017963	-	80	81.686	ENSPTRG00000034359	HNRNPUL2	100	75.984	Pan_troglodytes
ENSCPBG00000017963	-	78	82.324	ENSPANG00000023745	-	100	73.868	Papio_anubis
ENSCPBG00000017963	-	97	76.235	ENSPEMG00000015546	Hnrnpul2	100	75.359	Peromyscus_maniculatus_bairdii
ENSCPBG00000017963	-	73	84.821	ENSPCIG00000015254	-	65	84.973	Phascolarctos_cinereus
ENSCPBG00000017963	-	56	47.344	ENSPFOG00000008050	si:ch211-107m4.1	76	47.032	Poecilia_formosa
ENSCPBG00000017963	-	65	43.976	ENSPLAG00000003485	si:ch211-107m4.1	67	46.897	Poecilia_latipinna
ENSCPBG00000017963	-	66	43.307	ENSPMEG00000005490	si:ch211-107m4.1	66	47.442	Poecilia_mexicana
ENSCPBG00000017963	-	66	42.633	ENSPREG00000014973	si:ch211-107m4.1	66	46.279	Poecilia_reticulata
ENSCPBG00000017963	-	81	77.409	ENSPCAG00000010016	-	100	72.787	Procavia_capensis
ENSCPBG00000017963	-	97	75.632	ENSPCOG00000013502	-	100	75.033	Propithecus_coquereli
ENSCPBG00000017963	-	97	76.197	ENSPVAG00000003475	-	100	75.263	Pteropus_vampyrus
ENSCPBG00000017963	-	97	75.726	ENSRNOG00000019507	Hnrnpul2	100	75.397	Rattus_norvegicus
ENSCPBG00000017963	-	78	82.382	ENSRBIG00000037820	-	100	76.247	Rhinopithecus_bieti
ENSCPBG00000017963	-	78	82.382	ENSRROG00000036561	-	100	76.247	Rhinopithecus_roxellana
ENSCPBG00000017963	-	76	48.403	ENSSFOG00015006544	si:ch211-107m4.1	63	49.911	Scleropages_formosus
ENSCPBG00000017963	-	66	40.347	ENSSMAG00000017226	si:ch211-107m4.1	70	44.138	Scophthalmus_maximus
ENSCPBG00000017963	-	93	36.238	ENSSPAG00000006972	si:ch211-107m4.1	64	44.368	Stegastes_partitus
ENSCPBG00000017963	-	95	69.304	ENSSSCG00000028542	-	84	73.839	Sus_scrofa
ENSCPBG00000017963	-	84	36.308	ENSTRUG00000012843	si:ch211-107m4.1	66	41.781	Takifugu_rubripes
ENSCPBG00000017963	-	83	36.463	ENSTNIG00000000741	si:ch211-107m4.1	75	42.597	Tetraodon_nigroviridis
ENSCPBG00000017963	-	68	85.764	ENSTTRG00000002475	-	87	85.764	Tursiops_truncatus
ENSCPBG00000017963	-	81	81.250	ENSUAMG00000025971	-	100	75.921	Ursus_americanus
ENSCPBG00000017963	-	81	81.250	ENSVVUG00000029847	-	100	75.789	Vulpes_vulpes
ENSCPBG00000017963	-	88	51.176	ENSXETG00000006015	hnrnpul2	65	56.122	Xenopus_tropicalis
ENSCPBG00000017963	-	65	43.058	ENSXMAG00000003224	si:ch211-107m4.1	71	43.678	Xiphophorus_maculatus