EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000018049 (Gene tree)
Gene ID: 101932972
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 62467 bases
Position: chrKK088241.1:5848236-5910702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000027583	ResIII	PF04851.15	4.7e-09	1	1
ENSCPBP00000027523	ResIII	PF04851.15	1.2e-08	1	1
ENSCPBP00000027506	ResIII	PF04851.15	1.5e-08	1	1
ENSCPBP00000027467	ResIII	PF04851.15	1.6e-08	1	1
ENSCPBP00000027460	ResIII	PF04851.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000032387	-	3744	-	ENSCPBP00000027523	1247 (aa)	-	-
ENSCPBT00000032368	-	3951	-	ENSCPBP00000027506	1316 (aa)	-	-
ENSCPBT00000031933	-	5496	-	ENSCPBP00000027125	1831 (aa)	-	-
ENSCPBT00000032328	-	4152	-	ENSCPBP00000027467	1383 (aa)	-	-
ENSCPBT00000032319	-	4215	-	ENSCPBP00000027460	1404 (aa)	-	-
ENSCPBT00000032451	-	2643	-	ENSCPBP00000027583	880 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000018049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000018049	-	64	43.082	ENSCPBG00000027535	SMARCA5	50	44.139
ENSCPBG00000018049	-	60	45.693	ENSCPBG00000002600	CHD1L	57	45.779
ENSCPBG00000018049	-	56	33.333	ENSCPBG00000011965	ERCC6L	77	35.220
ENSCPBG00000018049	-	81	42.707	ENSCPBG00000011966	CHD3	60	43.083
ENSCPBG00000018049	-	95	72.976	ENSCPBG00000015831	CHD1	82	72.944
ENSCPBG00000018049	-	52	32.186	ENSCPBG00000005675	RAD54L	66	33.065
ENSCPBG00000018049	-	53	33.140	ENSCPBG00000003204	-	59	33.333
ENSCPBG00000018049	-	53	36.973	ENSCPBG00000013203	SMARCAD1	50	37.247
ENSCPBG00000018049	-	64	35.938	ENSCPBG00000025739	HELLS	90	36.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018049	-	97	90.385	ENSG00000173575	CHD2	100	97.143	Homo_sapiens
ENSCPBG00000018049	-	95	81.477	ENSAPOG00000008913	chd2	83	76.190	Acanthochromis_polyacanthus
ENSCPBG00000018049	-	95	91.920	ENSAMEG00000010805	-	79	90.351	Ailuropoda_melanoleuca
ENSCPBG00000018049	-	95	81.360	ENSAOCG00000016332	chd2	82	76.101	Amphiprion_ocellaris
ENSCPBG00000018049	-	95	81.360	ENSAPEG00000016676	chd2	82	77.239	Amphiprion_percula
ENSCPBG00000018049	-	95	82.181	ENSATEG00000005246	chd2	81	77.027	Anabas_testudineus
ENSCPBG00000018049	-	97	94.231	ENSAPLG00000011141	-	81	89.264	Anas_platyrhynchos
ENSCPBG00000018049	-	96	94.444	ENSACAG00000000088	-	68	96.154	Anolis_carolinensis
ENSCPBG00000018049	-	97	91.346	ENSANAG00000024017	-	82	88.172	Aotus_nancymaae
ENSCPBG00000018049	-	95	81.486	ENSACLG00000021370	chd2	84	77.001	Astatotilapia_calliptera
ENSCPBG00000018049	-	93	94.168	ENSBTAG00000017776	CHD2	98	94.046	Bos_taurus
ENSCPBG00000018049	-	97	91.346	ENSCJAG00000020444	-	82	88.082	Callithrix_jacchus
ENSCPBG00000018049	-	97	91.346	ENSCAFG00000010998	CHD2	80	88.420	Canis_familiaris
ENSCPBG00000018049	-	97	90.385	ENSCHIG00000022261	-	81	86.933	Capra_hircus
ENSCPBG00000018049	-	97	91.346	ENSTSYG00000003272	-	77	91.346	Carlito_syrichta
ENSCPBG00000018049	-	95	91.090	ENSCPOG00000005800	-	78	88.610	Cavia_porcellus
ENSCPBG00000018049	-	97	91.346	ENSCCAG00000035304	-	82	87.578	Cebus_capucinus
ENSCPBG00000018049	-	97	91.346	ENSCATG00000031069	-	80	88.378	Cercocebus_atys
ENSCPBG00000018049	-	97	95.745	ENSCLAG00000016269	-	73	95.745	Chinchilla_lanigera
ENSCPBG00000018049	-	97	91.346	ENSCSAG00000017007	-	81	87.578	Chlorocebus_sabaeus
ENSCPBG00000018049	-	87	100.000	ENSCHOG00000000608	-	63	100.000	Choloepus_hoffmanni
ENSCPBG00000018049	-	95	64.057	ENSCSAVG00000007580	-	92	59.653	Ciona_savignyi
ENSCPBG00000018049	-	97	90.385	ENSCANG00000038126	-	81	87.768	Colobus_angolensis_palliatus
ENSCPBG00000018049	-	95	91.559	ENSCGRG00001006649	Chd2	81	86.903	Cricetulus_griseus_chok1gshd
ENSCPBG00000018049	-	95	91.559	ENSCGRG00000018154	Chd2	81	86.903	Cricetulus_griseus_crigri
ENSCPBG00000018049	-	95	73.389	ENSCSEG00000003646	chd2	80	69.406	Cynoglossus_semilaevis
ENSCPBG00000018049	-	95	78.520	ENSCVAG00000002427	chd2	81	73.651	Cyprinodon_variegatus
ENSCPBG00000018049	-	95	82.360	ENSDARG00000060687	chd2	80	77.410	Danio_rerio
ENSCPBG00000018049	-	97	90.385	ENSDNOG00000009796	-	81	87.123	Dasypus_novemcinctus
ENSCPBG00000018049	-	77	80.000	ENSEBUG00000014994	chd2	84	73.472	Eptatretus_burgeri
ENSCPBG00000018049	-	97	91.346	ENSEASG00005015526	-	94	90.543	Equus_asinus_asinus
ENSCPBG00000018049	-	97	88.298	ENSELUG00000017981	chd2	82	78.017	Esox_lucius
ENSCPBG00000018049	-	95	93.662	ENSFALG00000010369	-	81	89.343	Ficedula_albicollis
ENSCPBG00000018049	-	97	95.745	ENSFDAG00000020651	-	81	87.111	Fukomys_damarensis
ENSCPBG00000018049	-	96	86.667	ENSFHEG00000002119	chd2	83	73.905	Fundulus_heteroclitus
ENSCPBG00000018049	-	95	78.154	ENSGMOG00000002890	chd2	70	84.043	Gadus_morhua
ENSCPBG00000018049	-	97	93.269	ENSGALG00000006949	CHD2	76	93.269	Gallus_gallus
ENSCPBG00000018049	-	95	81.712	ENSGAFG00000001905	chd2	82	74.185	Gambusia_affinis
ENSCPBG00000018049	-	95	79.508	ENSGACG00000013246	chd2	79	74.617	Gasterosteus_aculeatus
ENSCPBG00000018049	-	96	98.458	ENSGAGG00000013176	-	100	98.458	Gopherus_agassizii
ENSCPBG00000018049	-	97	91.346	ENSGGOG00000015677	CHD2	78	91.346	Gorilla_gorilla
ENSCPBG00000018049	-	95	81.604	ENSHBUG00000017947	chd2	84	77.093	Haplochromis_burtoni
ENSCPBG00000018049	-	97	96.809	ENSHGLG00000004435	CHD2	72	96.809	Heterocephalus_glaber_female
ENSCPBG00000018049	-	97	96.809	ENSHGLG00100016376	-	72	96.809	Heterocephalus_glaber_male
ENSCPBG00000018049	-	95	83.333	ENSHCOG00000008855	chd2	79	74.321	Hippocampus_comes
ENSCPBG00000018049	-	96	85.714	ENSIPUG00000000488	chd2	75	86.170	Ictalurus_punctatus
ENSCPBG00000018049	-	97	96.809	ENSSTOG00000001270	-	72	96.809	Ictidomys_tridecemlineatus
ENSCPBG00000018049	-	97	89.720	ENSJJAG00000000213	Chd2	81	87.022	Jaculus_jaculus
ENSCPBG00000018049	-	92	77.148	ENSKMAG00000015849	chd2	91	77.073	Kryptolebias_marmoratus
ENSCPBG00000018049	-	95	93.198	ENSLAFG00000016885	-	96	93.429	Loxodonta_africana
ENSCPBG00000018049	-	97	91.346	ENSMFAG00000033343	-	81	87.578	Macaca_fascicularis
ENSCPBG00000018049	-	97	91.346	ENSMMUG00000011782	-	81	87.578	Macaca_mulatta
ENSCPBG00000018049	-	97	91.346	ENSMNEG00000036875	-	77	91.346	Macaca_nemestrina
ENSCPBG00000018049	-	97	91.346	ENSMLEG00000035026	-	81	87.578	Mandrillus_leucophaeus
ENSCPBG00000018049	-	95	82.956	ENSMAMG00000009082	chd2	82	76.965	Mastacembelus_armatus
ENSCPBG00000018049	-	95	81.486	ENSMZEG00005021333	chd2	83	77.001	Maylandia_zebra
ENSCPBG00000018049	-	97	93.269	ENSMGAG00000008966	-	76	93.269	Meleagris_gallopavo
ENSCPBG00000018049	-	97	91.346	ENSMICG00000000332	-	77	91.346	Microcebus_murinus
ENSCPBG00000018049	-	95	91.442	ENSMOCG00000015124	Chd2	81	87.168	Microtus_ochrogaster
ENSCPBG00000018049	-	97	94.231	ENSMODG00000013158	-	81	88.968	Monodelphis_domestica
ENSCPBG00000018049	-	96	85.714	ENSMALG00000007755	chd2	73	86.170	Monopterus_albus
ENSCPBG00000018049	-	95	91.559	MGP_CAROLIEiJ_G0029860	Chd2	81	87.467	Mus_caroli
ENSCPBG00000018049	-	95	91.325	ENSMUSG00000078671	Chd2	81	87.289	Mus_musculus
ENSCPBG00000018049	-	95	91.325	MGP_PahariEiJ_G0013082	Chd2	81	86.761	Mus_pahari
ENSCPBG00000018049	-	95	91.325	MGP_SPRETEiJ_G0030962	Chd2	81	87.289	Mus_spretus
ENSCPBG00000018049	-	97	91.346	ENSMPUG00000017577	-	81	87.500	Mustela_putorius_furo
ENSCPBG00000018049	-	97	91.346	ENSMLUG00000009292	-	77	91.346	Myotis_lucifugus
ENSCPBG00000018049	-	97	90.385	ENSNGAG00000010792	Chd2	81	87.467	Nannospalax_galili
ENSCPBG00000018049	-	95	81.125	ENSNBRG00000020591	chd2	82	76.036	Neolamprologus_brichardi
ENSCPBG00000018049	-	97	91.346	ENSNLEG00000012349	-	76	92.625	Nomascus_leucogenys
ENSCPBG00000018049	-	78	88.802	ENSMEUG00000001522	-	60	86.957	Notamacropus_eugenii
ENSCPBG00000018049	-	97	90.385	ENSODEG00000016028	-	81	86.489	Octodon_degus
ENSCPBG00000018049	-	95	81.125	ENSONIG00000015136	chd2	80	76.148	Oreochromis_niloticus
ENSCPBG00000018049	-	97	100.000	ENSOANG00000004385	-	90	96.809	Ornithorhynchus_anatinus
ENSCPBG00000018049	-	95	91.439	ENSOCUG00000001628	-	78	91.511	Oryctolagus_cuniculus
ENSCPBG00000018049	-	94	85.556	ENSORLG00000008403	chd2	80	76.036	Oryzias_latipes
ENSCPBG00000018049	-	94	85.556	ENSORLG00020004138	chd2	79	75.946	Oryzias_latipes_hni
ENSCPBG00000018049	-	95	77.924	ENSOMEG00000005831	chd2	77	74.668	Oryzias_melastigma
ENSCPBG00000018049	-	97	91.346	ENSOGAG00000010399	-	76	91.346	Otolemur_garnettii
ENSCPBG00000018049	-	97	90.385	ENSOARG00000010343	-	83	87.556	Ovis_aries
ENSCPBG00000018049	-	97	91.346	ENSPPAG00000030381	-	83	87.722	Pan_paniscus
ENSCPBG00000018049	-	97	91.346	ENSPTRG00000007478	CHD2	82	88.082	Pan_troglodytes
ENSCPBG00000018049	-	97	91.346	ENSPANG00000033355	-	76	91.346	Papio_anubis
ENSCPBG00000018049	-	95	83.138	ENSPKIG00000000495	chd2	81	78.539	Paramormyrops_kingsleyae
ENSCPBG00000018049	-	88	80.100	ENSPMGG00000009941	chd2	89	74.855	Periophthalmus_magnuspinnatus
ENSCPBG00000018049	-	95	91.442	ENSPEMG00000019507	Chd2	81	87.289	Peromyscus_maniculatus_bairdii
ENSCPBG00000018049	-	60	82.197	ENSPMAG00000003871	-	100	83.302	Petromyzon_marinus
ENSCPBG00000018049	-	97	94.231	ENSPCIG00000009417	-	100	90.510	Phascolarctos_cinereus
ENSCPBG00000018049	-	76	74.256	ENSPFOG00000000291	-	73	74.516	Poecilia_formosa
ENSCPBG00000018049	-	96	85.106	ENSPFOG00000007050	chd2	80	76.148	Poecilia_formosa
ENSCPBG00000018049	-	96	85.106	ENSPLAG00000005067	chd2	80	76.238	Poecilia_latipinna
ENSCPBG00000018049	-	96	85.106	ENSPMEG00000019628	chd2	73	85.106	Poecilia_mexicana
ENSCPBG00000018049	-	97	91.346	ENSPPYG00000006799	-	76	91.346	Pongo_abelii
ENSCPBG00000018049	-	97	90.385	ENSPCOG00000028084	-	81	87.378	Propithecus_coquereli
ENSCPBG00000018049	-	95	81.486	ENSPNYG00000010273	chd2	84	77.001	Pundamilia_nyererei
ENSCPBG00000018049	-	96	87.778	ENSPNAG00000016719	chd2	75	88.298	Pygocentrus_nattereri
ENSCPBG00000018049	-	95	91.325	ENSRNOG00000012716	Chd2	81	87.200	Rattus_norvegicus
ENSCPBG00000018049	-	97	91.346	ENSRBIG00000036875	-	81	88.479	Rhinopithecus_bieti
ENSCPBG00000018049	-	97	90.385	ENSRROG00000041087	-	81	87.578	Rhinopithecus_roxellana
ENSCPBG00000018049	-	97	91.346	ENSSBOG00000023754	-	82	88.172	Saimiri_boliviensis_boliviensis
ENSCPBG00000018049	-	97	93.269	ENSSHAG00000012513	-	81	89.235	Sarcophilus_harrisii
ENSCPBG00000018049	-	97	83.333	ENSSFOG00015023759	chd2	80	78.952	Scleropages_formosus
ENSCPBG00000018049	-	95	80.305	ENSSMAG00000001726	chd2	83	75.960	Scophthalmus_maximus
ENSCPBG00000018049	-	95	81.125	ENSSLDG00000001146	chd2	83	76.148	Seriola_lalandi_dorsalis
ENSCPBG00000018049	-	83	91.700	ENSSARG00000014112	-	59	93.939	Sorex_araneus
ENSCPBG00000018049	-	97	94.231	ENSSPUG00000011266	-	79	94.231	Sphenodon_punctatus
ENSCPBG00000018049	-	96	85.714	ENSSPAG00000016452	chd2	82	76.126	Stegastes_partitus
ENSCPBG00000018049	-	94	94.915	ENSSSCG00000002266	-	93	87.263	Sus_scrofa
ENSCPBG00000018049	-	95	93.662	ENSTGUG00000008540	-	81	89.343	Taeniopygia_guttata
ENSCPBG00000018049	-	95	76.996	ENSTRUG00000008842	chd2	66	83.333	Takifugu_rubripes
ENSCPBG00000018049	-	95	81.406	ENSTNIG00000010760	chd2	81	76.692	Tetraodon_nigroviridis
ENSCPBG00000018049	-	95	75.088	ENSTBEG00000017730	-	66	84.409	Tupaia_belangeri
ENSCPBG00000018049	-	92	96.809	ENSTTRG00000000430	-	73	96.809	Tursiops_truncatus
ENSCPBG00000018049	-	97	91.346	ENSUMAG00000000083	-	83	87.500	Ursus_maritimus
ENSCPBG00000018049	-	75	96.022	ENSVPAG00000009645	-	64	96.022	Vicugna_pacos
ENSCPBG00000018049	-	95	87.201	ENSXETG00000024129	chd2	86	82.804	Xenopus_tropicalis
ENSCPBG00000018049	-	95	81.818	ENSXCOG00000020255	chd2	83	76.471	Xiphophorus_couchianus
ENSCPBG00000018049	-	95	81.477	ENSXMAG00000002707	chd2	82	76.148	Xiphophorus_maculatus