EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000018200 (Gene tree)
Gene ID: 101942745
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 4243 bases
Position: chrKK082922.1:5548032-5552274
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025601	RRM_1	PF00076.22	1.2e-31	1	2
ENSCPBP00000025601	RRM_1	PF00076.22	1.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000030154	SRSF6-201	1372	-	ENSCPBP00000025601	346 (aa)	XP_005295416	UPI000388E419

Gene Model

Click here to download ENSCPBG00000018200's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG
cpic05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000018200	SRSF6	53	65.385	ENSCPBG00000021518	-	69	64.481
ENSCPBG00000018200	SRSF6	68	54.237	ENSCPBG00000021653	SRSF5	67	62.162
ENSCPBG00000018200	SRSF6	58	40.758	ENSCPBG00000009851	-	78	41.063
ENSCPBG00000018200	SRSF6	50	42.135	ENSCPBG00000011340	SRSF9	74	39.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018200	SRSF6	94	85.061	ENSG00000124193	SRSF6	58	97.436	Homo_sapiens
ENSCPBG00000018200	SRSF6	94	71.343	ENSAMEG00000003710	SRSF6	54	73.545	Ailuropoda_melanoleuca
ENSCPBG00000018200	SRSF6	96	68.955	ENSACIG00000023658	-	56	85.792	Amphilophus_citrinellus
ENSCPBG00000018200	SRSF6	73	73.622	ENSACIG00000020091	-	95	77.692	Amphilophus_citrinellus
ENSCPBG00000018200	SRSF6	54	84.409	ENSAOCG00000004309	-	57	82.888	Amphiprion_ocellaris
ENSCPBG00000018200	SRSF6	54	89.785	ENSAPEG00000013086	-	53	87.701	Amphiprion_percula
ENSCPBG00000018200	SRSF6	55	82.632	ENSAPEG00000020746	-	65	83.422	Amphiprion_percula
ENSCPBG00000018200	SRSF6	53	82.162	ENSATEG00000007255	-	71	81.818	Anabas_testudineus
ENSCPBG00000018200	SRSF6	94	92.049	ENSACAG00000002061	SRSF6	91	90.712	Anolis_carolinensis
ENSCPBG00000018200	SRSF6	94	85.061	ENSANAG00000024080	SRSF6	58	97.436	Aotus_nancymaae
ENSCPBG00000018200	SRSF6	93	68.902	ENSAMXG00000042692	-	96	82.963	Astyanax_mexicanus
ENSCPBG00000018200	SRSF6	93	85.231	ENSBTAG00000008527	SRSF6	58	96.154	Bos_taurus
ENSCPBG00000018200	SRSF6	55	94.737	ENSCJAG00000048403	SRSF6	68	92.553	Callithrix_jacchus
ENSCPBG00000018200	SRSF6	94	84.969	ENSCAFG00000009289	SRSF6	58	96.154	Canis_familiaris
ENSCPBG00000018200	SRSF6	94	84.969	ENSCAFG00020013559	SRSF6	58	96.154	Canis_lupus_dingo
ENSCPBG00000018200	SRSF6	94	85.015	ENSCHIG00000015890	-	58	96.154	Capra_hircus
ENSCPBG00000018200	SRSF6	94	84.404	ENSCHIG00000009148	-	54	90.426	Capra_hircus
ENSCPBG00000018200	SRSF6	94	72.308	ENSCPOG00000011761	SRSF6	58	97.436	Cavia_porcellus
ENSCPBG00000018200	SRSF6	94	85.061	ENSCCAG00000026018	-	58	97.436	Cebus_capucinus
ENSCPBG00000018200	SRSF6	54	83.598	ENSCCAG00000018540	-	61	82.011	Cebus_capucinus
ENSCPBG00000018200	SRSF6	94	85.015	ENSCATG00000030794	SRSF6	58	97.436	Cercocebus_atys
ENSCPBG00000018200	SRSF6	94	85.410	ENSCLAG00000010247	SRSF6	58	97.436	Chinchilla_lanigera
ENSCPBG00000018200	SRSF6	94	85.015	ENSCSAG00000014022	SRSF6	54	92.553	Chlorocebus_sabaeus
ENSCPBG00000018200	SRSF6	94	84.709	ENSCANG00000037774	-	54	91.489	Colobus_angolensis_palliatus
ENSCPBG00000018200	SRSF6	94	84.709	ENSCGRG00001022339	Srsf6	58	94.872	Cricetulus_griseus_chok1gshd
ENSCPBG00000018200	SRSF6	54	84.492	ENSDARG00000016783	srsf6b	82	91.026	Danio_rerio
ENSCPBG00000018200	SRSF6	94	86.018	ENSDNOG00000008410	SRSF6	53	92.553	Dasypus_novemcinctus
ENSCPBG00000018200	SRSF6	94	85.455	ENSDORG00000028378	Srsf6	58	97.436	Dipodomys_ordii
ENSCPBG00000018200	SRSF6	93	83.591	ENSETEG00000006221	SRSF6	53	87.234	Echinops_telfairi
ENSCPBG00000018200	SRSF6	94	72.086	ENSEASG00005023429	SRSF6	54	91.489	Equus_asinus_asinus
ENSCPBG00000018200	SRSF6	94	72.086	ENSECAG00000023932	SRSF6	57	91.489	Equus_caballus
ENSCPBG00000018200	SRSF6	53	83.696	ENSELUG00000013506	SRSF6	70	88.462	Esox_lucius
ENSCPBG00000018200	SRSF6	54	83.938	ENSELUG00000024182	SRSF6	90	82.114	Esox_lucius
ENSCPBG00000018200	SRSF6	94	84.969	ENSFCAG00000032814	SRSF6	54	91.489	Felis_catus
ENSCPBG00000018200	SRSF6	90	71.019	ENSFHEG00000023065	srsf6a	55	85.561	Fundulus_heteroclitus
ENSCPBG00000018200	SRSF6	66	64.192	ENSGMOG00000006105	srsf6a	62	71.038	Gadus_morhua
ENSCPBG00000018200	SRSF6	53	83.333	ENSGMOG00000014458	srsf6a	52	80.208	Gadus_morhua
ENSCPBG00000018200	SRSF6	93	90.798	ENSGALG00000000990	SRSF6	67	95.556	Gallus_gallus
ENSCPBG00000018200	SRSF6	87	63.422	ENSGACG00000006084	srsf6a	53	83.422	Gasterosteus_aculeatus
ENSCPBG00000018200	SRSF6	100	100.000	ENSGAGG00000003238	SRSF6	100	100.000	Gopherus_agassizii
ENSCPBG00000018200	SRSF6	94	85.061	ENSGGOG00000009808	SRSF6	58	97.436	Gorilla_gorilla
ENSCPBG00000018200	SRSF6	64	73.593	ENSHBUG00000006386	-	58	83.422	Haplochromis_burtoni
ENSCPBG00000018200	SRSF6	88	72.039	ENSHGLG00000007701	-	57	70.745	Heterocephalus_glaber_female
ENSCPBG00000018200	SRSF6	94	85.410	ENSHGLG00000007348	SRSF6	58	97.436	Heterocephalus_glaber_female
ENSCPBG00000018200	SRSF6	87	68.874	ENSHCOG00000002740	srsf6a	57	83.422	Hippocampus_comes
ENSCPBG00000018200	SRSF6	54	86.096	ENSIPUG00000004776	-	64	84.492	Ictalurus_punctatus
ENSCPBG00000018200	SRSF6	94	84.756	ENSSTOG00000010866	SRSF6	58	97.436	Ictidomys_tridecemlineatus
ENSCPBG00000018200	SRSF6	55	78.534	ENSJJAG00000020690	Srsf6	89	77.778	Jaculus_jaculus
ENSCPBG00000018200	SRSF6	53	87.568	ENSLBEG00000007356	srsf6a	52	86.096	Labrus_bergylta
ENSCPBG00000018200	SRSF6	93	82.609	ENSLACG00000005466	SRSF6	54	91.444	Latimeria_chalumnae
ENSCPBG00000018200	SRSF6	67	85.654	ENSLAFG00000006682	SRSF6	87	86.726	Loxodonta_africana
ENSCPBG00000018200	SRSF6	94	85.015	ENSMFAG00000036925	SRSF6	58	97.436	Macaca_fascicularis
ENSCPBG00000018200	SRSF6	94	85.015	ENSMMUG00000006742	SRSF6	58	97.436	Macaca_mulatta
ENSCPBG00000018200	SRSF6	94	84.404	ENSMNEG00000027392	-	58	94.872	Macaca_nemestrina
ENSCPBG00000018200	SRSF6	93	84.000	ENSMNEG00000038270	-	54	91.489	Macaca_nemestrina
ENSCPBG00000018200	SRSF6	54	89.247	ENSMAMG00000017161	srsf6a	53	87.166	Mastacembelus_armatus
ENSCPBG00000018200	SRSF6	68	76.496	ENSMZEG00005008032	-	57	83.422	Maylandia_zebra
ENSCPBG00000018200	SRSF6	87	63.455	ENSMZEG00005020658	-	60	82.609	Maylandia_zebra
ENSCPBG00000018200	SRSF6	66	87.391	ENSMGAG00000000888	SRSF6	82	84.000	Meleagris_gallopavo
ENSCPBG00000018200	SRSF6	94	84.709	ENSMICG00000008537	SRSF6	58	97.436	Microcebus_murinus
ENSCPBG00000018200	SRSF6	100	89.306	ENSMODG00000003107	SRSF6	100	85.549	Monodelphis_domestica
ENSCPBG00000018200	SRSF6	94	84.404	MGP_CAROLIEiJ_G0024606	Srsf6	58	94.872	Mus_caroli
ENSCPBG00000018200	SRSF6	94	84.404	ENSMUSG00000016921	Srsf6	58	94.872	Mus_musculus
ENSCPBG00000018200	SRSF6	94	84.709	MGP_PahariEiJ_G0026050	Srsf6	58	94.872	Mus_pahari
ENSCPBG00000018200	SRSF6	94	84.404	MGP_SPRETEiJ_G0025528	Srsf6	58	94.872	Mus_spretus
ENSCPBG00000018200	SRSF6	55	93.684	ENSMPUG00000017692	SRSF6	64	91.489	Mustela_putorius_furo
ENSCPBG00000018200	SRSF6	93	69.670	ENSMLUG00000016618	SRSF6	54	61.860	Myotis_lucifugus
ENSCPBG00000018200	SRSF6	94	84.404	ENSNGAG00000017560	Srsf6	58	97.436	Nannospalax_galili
ENSCPBG00000018200	SRSF6	53	89.674	ENSNBRG00000001846	-	52	87.166	Neolamprologus_brichardi
ENSCPBG00000018200	SRSF6	54	82.258	ENSNBRG00000014709	-	58	83.422	Neolamprologus_brichardi
ENSCPBG00000018200	SRSF6	94	85.061	ENSNLEG00000006524	SRSF6	58	97.436	Nomascus_leucogenys
ENSCPBG00000018200	SRSF6	54	95.745	ENSMEUG00000014615	SRSF6	61	93.617	Notamacropus_eugenii
ENSCPBG00000018200	SRSF6	87	69.333	ENSONIG00000020247	-	53	83.957	Oreochromis_niloticus
ENSCPBG00000018200	SRSF6	63	52.968	ENSOCUG00000023999	-	70	53.261	Oryctolagus_cuniculus
ENSCPBG00000018200	SRSF6	55	71.220	ENSOCUG00000009785	-	63	73.846	Oryctolagus_cuniculus
ENSCPBG00000018200	SRSF6	55	94.211	ENSOGAG00000014468	SRSF6	54	92.021	Otolemur_garnettii
ENSCPBG00000018200	SRSF6	93	81.846	ENSOARG00000003117	SRSF6	53	87.766	Ovis_aries
ENSCPBG00000018200	SRSF6	94	84.756	ENSPPAG00000034327	-	54	92.021	Pan_paniscus
ENSCPBG00000018200	SRSF6	90	73.397	ENSPPAG00000043131	-	58	79.894	Pan_paniscus
ENSCPBG00000018200	SRSF6	94	84.969	ENSPPRG00000008917	SRSF6	54	91.489	Panthera_pardus
ENSCPBG00000018200	SRSF6	94	84.756	ENSPTRG00000044686	-	58	97.436	Pan_troglodytes
ENSCPBG00000018200	SRSF6	90	73.397	ENSPTRG00000046274	-	58	79.894	Pan_troglodytes
ENSCPBG00000018200	SRSF6	94	85.015	ENSPANG00000035224	SRSF6	58	97.436	Papio_anubis
ENSCPBG00000018200	SRSF6	100	70.000	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSCPBG00000018200	SRSF6	89	72.492	ENSPMGG00000014963	srsf6a	55	87.166	Periophthalmus_magnuspinnatus
ENSCPBG00000018200	SRSF6	100	89.017	ENSPCIG00000003820	SRSF6	100	85.260	Phascolarctos_cinereus
ENSCPBG00000018200	SRSF6	89	64.350	ENSPLAG00000009243	srsf6a	80	84.252	Poecilia_latipinna
ENSCPBG00000018200	SRSF6	54	88.710	ENSPMEG00000006042	SRSF6	54	86.631	Poecilia_mexicana
ENSCPBG00000018200	SRSF6	94	85.061	ENSPPYG00000011019	SRSF6	54	92.553	Pongo_abelii
ENSCPBG00000018200	SRSF6	54	94.149	ENSPCAG00000010954	SRSF6	56	92.021	Procavia_capensis
ENSCPBG00000018200	SRSF6	94	84.709	ENSPCOG00000026364	SRSF6	58	97.436	Propithecus_coquereli
ENSCPBG00000018200	SRSF6	94	83.692	ENSPVAG00000015232	SRSF6	54	92.021	Pteropus_vampyrus
ENSCPBG00000018200	SRSF6	54	82.258	ENSPNYG00000004944	-	58	83.422	Pundamilia_nyererei
ENSCPBG00000018200	SRSF6	94	84.404	ENSRNOG00000006380	Srsf6	55	91.489	Rattus_norvegicus
ENSCPBG00000018200	SRSF6	93	82.353	ENSRBIG00000041414	SRSF6	62	97.500	Rhinopithecus_bieti
ENSCPBG00000018200	SRSF6	94	84.615	ENSRROG00000029989	SRSF6	58	97.436	Rhinopithecus_roxellana
ENSCPBG00000018200	SRSF6	93	62.928	ENSSBOG00000034078	-	54	73.370	Saimiri_boliviensis_boliviensis
ENSCPBG00000018200	SRSF6	94	85.061	ENSSBOG00000033708	-	58	97.436	Saimiri_boliviensis_boliviensis
ENSCPBG00000018200	SRSF6	100	89.306	ENSSHAG00000012805	SRSF6	100	85.549	Sarcophilus_harrisii
ENSCPBG00000018200	SRSF6	93	65.915	ENSSFOG00015019681	-	70	67.315	Scleropages_formosus
ENSCPBG00000018200	SRSF6	68	74.262	ENSSMAG00000017447	-	55	79.144	Scophthalmus_maximus
ENSCPBG00000018200	SRSF6	54	89.247	ENSSLDG00000022841	srsf6a	59	72.428	Seriola_lalandi_dorsalis
ENSCPBG00000018200	SRSF6	100	95.115	ENSSPUG00000004967	SRSF6	67	95.556	Sphenodon_punctatus
ENSCPBG00000018200	SRSF6	77	70.787	ENSSPAG00000002362	srsf6a	67	86.772	Stegastes_partitus
ENSCPBG00000018200	SRSF6	94	85.015	ENSSSCG00000007362	SRSF6	61	91.489	Sus_scrofa
ENSCPBG00000018200	SRSF6	93	92.000	ENSTGUG00000003455	SRSF6	53	95.213	Taeniopygia_guttata
ENSCPBG00000018200	SRSF6	89	74.757	ENSTNIG00000001692	srsf6a	57	85.561	Tetraodon_nigroviridis
ENSCPBG00000018200	SRSF6	94	84.969	ENSUAMG00000003559	SRSF6	58	96.154	Ursus_americanus
ENSCPBG00000018200	SRSF6	54	87.097	ENSXMAG00000021849	srsf6a	55	85.561	Xiphophorus_maculatus