EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPBG00000018215 (Gene tree)
Gene ID: -
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Minus strand
Length: 33659 bases
Position: chrKK088209.1:21265636-21299294
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025646	MA3	PF02847.17	8.3e-27	1	1
ENSCPBP00000025646	MIF4G	PF02854.19	4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000030201	NOM1-201	2628	-	ENSCPBP00000025646	875 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000018215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018215	NOM1	82	76.415	ENSG00000146909	NOM1	70	76.415	Homo_sapiens
ENSCPBG00000018215	NOM1	83	68.821	ENSAPOG00000012073	nom1	71	68.821	Acanthochromis_polyacanthus
ENSCPBG00000018215	NOM1	70	70.566	ENSAMEG00000001412	NOM1	81	70.566	Ailuropoda_melanoleuca
ENSCPBG00000018215	NOM1	60	69.392	ENSACIG00000018050	nom1	80	61.963	Amphilophus_citrinellus
ENSCPBG00000018215	NOM1	72	67.871	ENSAOCG00000006229	nom1	68	67.871	Amphiprion_ocellaris
ENSCPBG00000018215	NOM1	83	67.871	ENSAPEG00000015994	nom1	69	67.871	Amphiprion_percula
ENSCPBG00000018215	NOM1	73	68.311	ENSATEG00000005405	nom1	82	59.265	Anabas_testudineus
ENSCPBG00000018215	NOM1	71	72.086	ENSAPLG00000006585	NOM1	80	82.319	Anas_platyrhynchos
ENSCPBG00000018215	NOM1	69	82.298	ENSACAG00000011192	NOM1	73	82.298	Anolis_carolinensis
ENSCPBG00000018215	NOM1	74	67.228	ENSACLG00000000033	nom1	68	69.328	Astatotilapia_calliptera
ENSCPBG00000018215	NOM1	78	65.530	ENSAMXG00000041486	nom1	66	65.530	Astyanax_mexicanus
ENSCPBG00000018215	NOM1	88	60.245	ENSBTAG00000016435	NOM1	80	63.289	Bos_taurus
ENSCPBG00000018215	NOM1	60	75.189	ENSCJAG00000004336	NOM1	61	75.189	Callithrix_jacchus
ENSCPBG00000018215	NOM1	88	58.072	ENSCAFG00020005121	NOM1	71	71.645	Canis_lupus_dingo
ENSCPBG00000018215	NOM1	70	70.377	ENSCHIG00000020102	NOM1	85	70.377	Capra_hircus
ENSCPBG00000018215	NOM1	88	63.329	ENSTSYG00000000227	NOM1	79	68.120	Carlito_syrichta
ENSCPBG00000018215	NOM1	59	73.166	ENSCAPG00000016273	NOM1	99	72.885	Cavia_aperea
ENSCPBG00000018215	NOM1	87	57.355	ENSCPOG00000025538	NOM1	78	62.651	Cavia_porcellus
ENSCPBG00000018215	NOM1	75	60.894	ENSCLAG00000000267	NOM1	68	71.676	Chinchilla_lanigera
ENSCPBG00000018215	NOM1	58	40.588	ENSCING00000005248	-	68	40.705	Ciona_intestinalis
ENSCPBG00000018215	NOM1	60	75.047	ENSCANG00000041984	NOM1	91	75.047	Colobus_angolensis_palliatus
ENSCPBG00000018215	NOM1	73	62.319	ENSCGRG00001020293	Nom1	80	62.882	Cricetulus_griseus_chok1gshd
ENSCPBG00000018215	NOM1	59	73.988	ENSCGRG00000005405	Nom1	97	73.988	Cricetulus_griseus_crigri
ENSCPBG00000018215	NOM1	69	58.880	ENSCSEG00000000932	nom1	78	59.133	Cynoglossus_semilaevis
ENSCPBG00000018215	NOM1	84	68.491	ENSCVAG00000007562	nom1	70	68.362	Cyprinodon_variegatus
ENSCPBG00000018215	NOM1	60	67.742	ENSDARG00000060027	nom1	100	68.583	Danio_rerio
ENSCPBG00000018215	NOM1	59	61.154	ENSDORG00000015682	Nom1	98	56.090	Dipodomys_ordii
ENSCPBG00000018215	NOM1	59	40.789	FBgn0035336	CG9004	62	40.789	Drosophila_melanogaster
ENSCPBG00000018215	NOM1	61	54.906	ENSETEG00000003104	NOM1	69	67.797	Echinops_telfairi
ENSCPBG00000018215	NOM1	69	75.849	ENSEASG00005001489	NOM1	87	75.564	Equus_asinus_asinus
ENSCPBG00000018215	NOM1	67	75.614	ENSECAG00000007596	NOM1	81	75.614	Equus_caballus
ENSCPBG00000018215	NOM1	72	69.318	ENSELUG00000006266	nom1	71	69.318	Esox_lucius
ENSCPBG00000018215	NOM1	80	72.264	ENSFCAG00000006467	NOM1	83	72.264	Felis_catus
ENSCPBG00000018215	NOM1	75	69.330	ENSFALG00000006904	NOM1	85	79.696	Ficedula_albicollis
ENSCPBG00000018215	NOM1	88	57.041	ENSFDAG00000016241	NOM1	81	63.528	Fukomys_damarensis
ENSCPBG00000018215	NOM1	84	67.110	ENSFHEG00000015974	nom1	72	67.110	Fundulus_heteroclitus
ENSCPBG00000018215	NOM1	71	62.977	ENSGMOG00000005129	nom1	73	62.977	Gadus_morhua
ENSCPBG00000018215	NOM1	99	61.435	ENSGALG00000006437	NOM1	98	60.335	Gallus_gallus
ENSCPBG00000018215	NOM1	81	66.856	ENSGAFG00000003211	nom1	72	66.856	Gambusia_affinis
ENSCPBG00000018215	NOM1	87	94.872	ENSGAGG00000014347	NOM1	91	94.872	Gopherus_agassizii
ENSCPBG00000018215	NOM1	93	75.660	ENSGGOG00000010920	NOM1	65	75.660	Gorilla_gorilla
ENSCPBG00000018215	NOM1	73	67.228	ENSHBUG00000014616	nom1	74	67.228	Haplochromis_burtoni
ENSCPBG00000018215	NOM1	89	57.294	ENSHGLG00000007392	NOM1	70	70.755	Heterocephalus_glaber_female
ENSCPBG00000018215	NOM1	76	72.669	ENSHGLG00100014407	NOM1	70	70.755	Heterocephalus_glaber_male
ENSCPBG00000018215	NOM1	83	63.636	ENSIPUG00000013980	nom1	69	63.636	Ictalurus_punctatus
ENSCPBG00000018215	NOM1	60	73.714	ENSSTOG00000031736	NOM1	92	73.435	Ictidomys_tridecemlineatus
ENSCPBG00000018215	NOM1	55	75.413	ENSJJAG00000011716	Nom1	98	75.103	Jaculus_jaculus
ENSCPBG00000018215	NOM1	80	69.187	ENSLBEG00000009252	nom1	68	69.187	Labrus_bergylta
ENSCPBG00000018215	NOM1	60	75.810	ENSLACG00000011777	NOM1	64	75.810	Latimeria_chalumnae
ENSCPBG00000018215	NOM1	78	60.674	ENSLOCG00000012452	nom1	72	71.429	Lepisosteus_oculatus
ENSCPBG00000018215	NOM1	88	58.955	ENSLAFG00000007119	NOM1	83	63.181	Loxodonta_africana
ENSCPBG00000018215	NOM1	83	71.186	ENSMMUG00000039033	NOM1	69	75.000	Macaca_mulatta
ENSCPBG00000018215	NOM1	60	75.947	ENSMLEG00000037062	NOM1	99	75.947	Mandrillus_leucophaeus
ENSCPBG00000018215	NOM1	88	51.069	ENSMAMG00000004118	nom1	72	64.376	Mastacembelus_armatus
ENSCPBG00000018215	NOM1	74	67.041	ENSMZEG00005000384	nom1	70	67.041	Maylandia_zebra
ENSCPBG00000018215	NOM1	75	67.571	ENSMGAG00000005051	NOM1	98	69.643	Meleagris_gallopavo
ENSCPBG00000018215	NOM1	85	74.181	ENSMAUG00000017988	Nom1	62	74.181	Mesocricetus_auratus
ENSCPBG00000018215	NOM1	84	73.624	ENSMICG00000017531	NOM1	95	60.907	Microcebus_murinus
ENSCPBG00000018215	NOM1	88	58.373	ENSMOCG00000015962	Nom1	79	66.069	Microtus_ochrogaster
ENSCPBG00000018215	NOM1	85	64.273	ENSMMOG00000004419	nom1	73	64.273	Mola_mola
ENSCPBG00000018215	NOM1	82	80.916	ENSMODG00000005177	NOM1	99	62.098	Monodelphis_domestica
ENSCPBG00000018215	NOM1	69	59.568	ENSMALG00000008800	nom1	67	70.084	Monopterus_albus
ENSCPBG00000018215	NOM1	83	73.603	MGP_CAROLIEiJ_G0027043	Nom1	70	73.603	Mus_caroli
ENSCPBG00000018215	NOM1	90	58.303	ENSMUSG00000001569	Nom1	70	73.410	Mus_musculus
ENSCPBG00000018215	NOM1	90	57.952	MGP_SPRETEiJ_G0028039	Nom1	70	73.410	Mus_spretus
ENSCPBG00000018215	NOM1	66	81.633	ENSMPUG00000009745	NOM1	84	82.353	Mustela_putorius_furo
ENSCPBG00000018215	NOM1	60	73.962	ENSMLUG00000009129	NOM1	88	73.962	Myotis_lucifugus
ENSCPBG00000018215	NOM1	74	65.889	ENSNBRG00000016429	nom1	94	68.441	Neolamprologus_brichardi
ENSCPBG00000018215	NOM1	82	73.308	ENSNLEG00000000238	NOM1	70	73.611	Nomascus_leucogenys
ENSCPBG00000018215	NOM1	59	82.283	ENSMEUG00000001108	NOM1	85	62.570	Notamacropus_eugenii
ENSCPBG00000018215	NOM1	78	52.593	ENSOPRG00000014676	NOM1	69	53.275	Ochotona_princeps
ENSCPBG00000018215	NOM1	73	64.583	ENSODEG00000009399	NOM1	84	72.881	Octodon_degus
ENSCPBG00000018215	NOM1	74	67.228	ENSONIG00000005958	nom1	78	67.228	Oreochromis_niloticus
ENSCPBG00000018215	NOM1	53	79.221	ENSOANG00000006139	-	97	79.221	Ornithorhynchus_anatinus
ENSCPBG00000018215	NOM1	84	55.218	ENSOCUG00000021448	-	91	57.122	Oryctolagus_cuniculus
ENSCPBG00000018215	NOM1	88	62.410	ENSOCUG00000004071	-	73	76.836	Oryctolagus_cuniculus
ENSCPBG00000018215	NOM1	67	68.061	ENSORLG00000010541	nom1	73	68.061	Oryzias_latipes
ENSCPBG00000018215	NOM1	67	68.061	ENSORLG00020010789	nom1	79	68.061	Oryzias_latipes_hni
ENSCPBG00000018215	NOM1	80	68.061	ENSORLG00015010475	nom1	93	56.414	Oryzias_latipes_hsok
ENSCPBG00000018215	NOM1	71	68.821	ENSOMEG00000004219	nom1	70	68.821	Oryzias_melastigma
ENSCPBG00000018215	NOM1	61	73.774	ENSOGAG00000001124	NOM1	87	73.774	Otolemur_garnettii
ENSCPBG00000018215	NOM1	70	70.377	ENSOARG00000007261	NOM1	78	76.000	Ovis_aries
ENSCPBG00000018215	NOM1	82	75.660	ENSPPAG00000041374	NOM1	70	75.660	Pan_paniscus
ENSCPBG00000018215	NOM1	66	72.340	ENSPTIG00000013532	NOM1	79	73.469	Panthera_tigris_altaica
ENSCPBG00000018215	NOM1	82	75.660	ENSPTRG00000019917	NOM1	70	75.660	Pan_troglodytes
ENSCPBG00000018215	NOM1	61	75.660	ENSPANG00000007605	NOM1	68	75.660	Papio_anubis
ENSCPBG00000018215	NOM1	61	62.900	ENSPKIG00000005825	nom1	74	62.900	Paramormyrops_kingsleyae
ENSCPBG00000018215	NOM1	61	93.258	ENSPSIG00000017848	NOM1	89	93.097	Pelodiscus_sinensis
ENSCPBG00000018215	NOM1	75	60.673	ENSPMGG00000002577	nom1	65	69.697	Periophthalmus_magnuspinnatus
ENSCPBG00000018215	NOM1	87	58.053	ENSPEMG00000024180	Nom1	98	55.336	Peromyscus_maniculatus_bairdii
ENSCPBG00000018215	NOM1	86	79.317	ENSPCIG00000027941	NOM1	86	79.317	Phascolarctos_cinereus
ENSCPBG00000018215	NOM1	86	67.803	ENSPFOG00000015771	nom1	73	67.803	Poecilia_formosa
ENSCPBG00000018215	NOM1	82	67.803	ENSPLAG00000007856	nom1	74	67.803	Poecilia_latipinna
ENSCPBG00000018215	NOM1	84	67.803	ENSPMEG00000014155	nom1	74	67.803	Poecilia_mexicana
ENSCPBG00000018215	NOM1	84	67.614	ENSPREG00000008850	nom1	74	67.614	Poecilia_reticulata
ENSCPBG00000018215	NOM1	82	69.811	ENSPPYG00000018222	NOM1	69	73.611	Pongo_abelii
ENSCPBG00000018215	NOM1	70	69.464	ENSPCAG00000000440	NOM1	61	69.464	Procavia_capensis
ENSCPBG00000018215	NOM1	60	73.106	ENSPCOG00000015222	NOM1	99	73.106	Propithecus_coquereli
ENSCPBG00000018215	NOM1	88	57.952	ENSPVAG00000014760	NOM1	95	57.598	Pteropus_vampyrus
ENSCPBG00000018215	NOM1	74	66.667	ENSPNYG00000006975	nom1	96	66.791	Pundamilia_nyererei
ENSCPBG00000018215	NOM1	68	65.655	ENSPNAG00000011085	nom1	64	65.655	Pygocentrus_nattereri
ENSCPBG00000018215	NOM1	88	56.501	ENSRNOG00000048969	AABR07059041.1	64	69.231	Rattus_norvegicus
ENSCPBG00000018215	NOM1	88	60.943	ENSRBIG00000037042	NOM1	70	74.858	Rhinopithecus_bieti
ENSCPBG00000018215	NOM1	88	60.701	ENSRROG00000037293	NOM1	70	74.480	Rhinopithecus_roxellana
ENSCPBG00000018215	NOM1	52	33.068	YLR336C	-	55	33.466	Saccharomyces_cerevisiae
ENSCPBG00000018215	NOM1	73	79.811	ENSSHAG00000017998	-	99	70.238	Sarcophilus_harrisii
ENSCPBG00000018215	NOM1	55	66.049	ENSSFOG00015003196	nom1	100	66.049	Scleropages_formosus
ENSCPBG00000018215	NOM1	88	52.878	ENSSMAG00000011047	nom1	66	70.726	Scophthalmus_maximus
ENSCPBG00000018215	NOM1	72	68.352	ENSSDUG00000006834	nom1	69	68.352	Seriola_dumerili
ENSCPBG00000018215	NOM1	72	67.790	ENSSLDG00000021812	nom1	70	67.598	Seriola_lalandi_dorsalis
ENSCPBG00000018215	NOM1	89	61.374	ENSSPUG00000002556	NOM1	90	85.489	Sphenodon_punctatus
ENSCPBG00000018215	NOM1	85	68.441	ENSSPAG00000000953	nom1	67	68.441	Stegastes_partitus
ENSCPBG00000018215	NOM1	88	64.749	ENSTGUG00000000702	-	99	64.671	Taeniopygia_guttata
ENSCPBG00000018215	NOM1	70	66.604	ENSTRUG00000010239	nom1	70	66.604	Takifugu_rubripes
ENSCPBG00000018215	NOM1	75	57.817	ENSTNIG00000012783	nom1	74	65.530	Tetraodon_nigroviridis
ENSCPBG00000018215	NOM1	89	58.852	ENSTTRG00000009691	NOM1	89	63.263	Tursiops_truncatus
ENSCPBG00000018215	NOM1	85	71.645	ENSUAMG00000025450	NOM1	84	71.645	Ursus_americanus
ENSCPBG00000018215	NOM1	76	71.698	ENSUMAG00000014275	NOM1	99	65.789	Ursus_maritimus
ENSCPBG00000018215	NOM1	88	56.783	ENSVVUG00000002608	NOM1	68	71.887	Vulpes_vulpes
ENSCPBG00000018215	NOM1	84	73.038	ENSXETG00000021611	nom1	82	77.561	Xenopus_tropicalis
ENSCPBG00000018215	NOM1	83	66.920	ENSXMAG00000002451	nom1	72	66.920	Xiphophorus_maculatus