EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPBG00000018291 (Gene tree)
Gene ID: 101936103
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chrysemys_picta_bellii
Status: putative
Strand: Plus strand
Length: 16635 bases
Position: chr19:1302611-1319245
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPBP00000025924	SF3a60_bindingd	PF12108.8	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPBT00000030535	-	1404	-	ENSCPBP00000025924	467 (aa)	-	-

Gene Model

Click here to download ENSCPBG00000018291's gene model file

Pathways

Pathway ID	Pathway Name	Source
cpic03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCPBG00000018291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPBG00000018291	-	68	71.254	ENSCPBG00000007472	-	95	71.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPBG00000018291	-	100	88.623	ENSG00000183431	SF3A3	100	88.623	Homo_sapiens
ENSCPBG00000018291	-	100	83.633	ENSAPOG00000015608	sf3a3	100	83.633	Acanthochromis_polyacanthus
ENSCPBG00000018291	-	100	88.822	ENSAMEG00000001262	SF3A3	100	88.822	Ailuropoda_melanoleuca
ENSCPBG00000018291	-	95	77.712	ENSACIG00000009061	sf3a3	99	77.712	Amphilophus_citrinellus
ENSCPBG00000018291	-	100	84.032	ENSAOCG00000013954	sf3a3	100	84.032	Amphiprion_ocellaris
ENSCPBG00000018291	-	100	84.032	ENSAPEG00000007297	sf3a3	100	84.032	Amphiprion_percula
ENSCPBG00000018291	-	100	83.871	ENSATEG00000008754	sf3a3	100	83.871	Anabas_testudineus
ENSCPBG00000018291	-	93	91.068	ENSAPLG00000014900	SF3A3	98	91.068	Anas_platyrhynchos
ENSCPBG00000018291	-	100	89.022	ENSACAG00000017058	SF3A3	100	89.022	Anolis_carolinensis
ENSCPBG00000018291	-	100	67.465	ENSANAG00000036903	-	100	67.465	Aotus_nancymaae
ENSCPBG00000018291	-	99	86.885	ENSANAG00000014878	SF3A3	100	86.885	Aotus_nancymaae
ENSCPBG00000018291	-	100	83.832	ENSACLG00000017977	sf3a3	100	83.832	Astatotilapia_calliptera
ENSCPBG00000018291	-	100	83.433	ENSAMXG00000016855	sf3a3	87	83.433	Astyanax_mexicanus
ENSCPBG00000018291	-	100	89.022	ENSBTAG00000007299	SF3A3	100	89.022	Bos_taurus
ENSCPBG00000018291	-	100	49.304	WBGene00011758	T13H5.4	100	49.304	Caenorhabditis_elegans
ENSCPBG00000018291	-	100	88.623	ENSCJAG00000002176	SF3A3	100	88.623	Callithrix_jacchus
ENSCPBG00000018291	-	100	88.822	ENSCAFG00000003222	-	100	88.822	Canis_familiaris
ENSCPBG00000018291	-	100	88.822	ENSCAFG00000000683	-	100	88.822	Canis_familiaris
ENSCPBG00000018291	-	100	88.822	ENSCAFG00020006186	SF3A3	100	88.822	Canis_lupus_dingo
ENSCPBG00000018291	-	100	90.631	ENSCHIG00000020638	SF3A3	100	90.631	Capra_hircus
ENSCPBG00000018291	-	100	82.435	ENSTSYG00000008417	SF3A3	100	82.435	Carlito_syrichta
ENSCPBG00000018291	-	86	59.286	ENSCAPG00000003466	SF3A3	100	56.190	Cavia_aperea
ENSCPBG00000018291	-	100	88.623	ENSCPOG00000008660	SF3A3	100	88.623	Cavia_porcellus
ENSCPBG00000018291	-	100	88.623	ENSCCAG00000033732	SF3A3	100	88.623	Cebus_capucinus
ENSCPBG00000018291	-	100	66.876	ENSCCAG00000034048	-	100	63.522	Cebus_capucinus
ENSCPBG00000018291	-	100	65.587	ENSCATG00000043537	-	100	66.194	Cercocebus_atys
ENSCPBG00000018291	-	100	88.623	ENSCATG00000043496	SF3A3	100	88.623	Cercocebus_atys
ENSCPBG00000018291	-	93	72.926	ENSCATG00000041660	-	100	74.454	Cercocebus_atys
ENSCPBG00000018291	-	100	88.623	ENSCLAG00000010838	SF3A3	100	88.623	Chinchilla_lanigera
ENSCPBG00000018291	-	95	88.025	ENSCSAG00000001120	SF3A3	100	88.025	Chlorocebus_sabaeus
ENSCPBG00000018291	-	72	88.360	ENSCHOG00000006849	SF3A3	69	88.360	Choloepus_hoffmanni
ENSCPBG00000018291	-	100	62.151	ENSCING00000002730	-	100	62.151	Ciona_intestinalis
ENSCPBG00000018291	-	100	62.675	ENSCSAVG00000005063	-	100	62.675	Ciona_savignyi
ENSCPBG00000018291	-	100	62.880	ENSCANG00000035535	-	100	62.880	Colobus_angolensis_palliatus
ENSCPBG00000018291	-	100	88.623	ENSCANG00000042083	SF3A3	100	88.623	Colobus_angolensis_palliatus
ENSCPBG00000018291	-	100	88.423	ENSCGRG00001011320	Sf3a3	100	88.423	Cricetulus_griseus_chok1gshd
ENSCPBG00000018291	-	100	88.423	ENSCGRG00000012156	Sf3a3	100	88.423	Cricetulus_griseus_crigri
ENSCPBG00000018291	-	100	82.036	ENSCSEG00000010401	sf3a3	100	82.036	Cynoglossus_semilaevis
ENSCPBG00000018291	-	95	82.479	ENSCVAG00000010239	sf3a3	95	82.479	Cyprinodon_variegatus
ENSCPBG00000018291	-	100	82.435	ENSDARG00000100114	sf3a3	100	85.203	Danio_rerio
ENSCPBG00000018291	-	91	87.746	ENSDNOG00000046628	SF3A3	99	87.746	Dasypus_novemcinctus
ENSCPBG00000018291	-	100	88.822	ENSDORG00000008798	Sf3a3	100	88.822	Dipodomys_ordii
ENSCPBG00000018291	-	100	60.594	FBgn0014366	noi	100	60.396	Drosophila_melanogaster
ENSCPBG00000018291	-	100	75.299	ENSEBUG00000015411	sf3a3	92	75.896	Eptatretus_burgeri
ENSCPBG00000018291	-	100	88.822	ENSEASG00005012906	SF3A3	100	88.822	Equus_asinus_asinus
ENSCPBG00000018291	-	100	90.428	ENSECAG00000017333	SF3A3	100	90.428	Equus_caballus
ENSCPBG00000018291	-	100	81.637	ENSELUG00000010024	sf3a3	100	81.637	Esox_lucius
ENSCPBG00000018291	-	100	88.822	ENSFCAG00000027772	SF3A3	100	88.822	Felis_catus
ENSCPBG00000018291	-	100	89.820	ENSFALG00000001003	SF3A3	100	89.820	Ficedula_albicollis
ENSCPBG00000018291	-	100	88.623	ENSFDAG00000020908	SF3A3	100	88.623	Fukomys_damarensis
ENSCPBG00000018291	-	100	82.834	ENSFHEG00000019107	sf3a3	100	82.834	Fundulus_heteroclitus
ENSCPBG00000018291	-	100	81.437	ENSGMOG00000015540	sf3a3	100	81.437	Gadus_morhua
ENSCPBG00000018291	-	100	89.222	ENSGALG00000001540	SF3A3	100	89.222	Gallus_gallus
ENSCPBG00000018291	-	100	83.034	ENSGAFG00000002320	sf3a3	100	83.034	Gambusia_affinis
ENSCPBG00000018291	-	100	83.633	ENSGACG00000007842	sf3a3	100	83.633	Gasterosteus_aculeatus
ENSCPBG00000018291	-	100	91.417	ENSGAGG00000014980	SF3A3	100	91.417	Gopherus_agassizii
ENSCPBG00000018291	-	100	88.623	ENSGGOG00000013928	SF3A3	100	88.623	Gorilla_gorilla
ENSCPBG00000018291	-	100	68.064	ENSGGOG00000022611	-	100	67.465	Gorilla_gorilla
ENSCPBG00000018291	-	100	83.832	ENSHBUG00000018158	sf3a3	99	86.534	Haplochromis_burtoni
ENSCPBG00000018291	-	100	88.423	ENSHGLG00000012502	SF3A3	100	88.423	Heterocephalus_glaber_female
ENSCPBG00000018291	-	100	88.423	ENSHGLG00100010546	SF3A3	100	88.423	Heterocephalus_glaber_male
ENSCPBG00000018291	-	100	80.838	ENSHCOG00000015109	sf3a3	100	80.838	Hippocampus_comes
ENSCPBG00000018291	-	100	81.836	ENSIPUG00000011603	sf3a3	100	81.836	Ictalurus_punctatus
ENSCPBG00000018291	-	100	88.623	ENSSTOG00000001691	SF3A3	100	88.623	Ictidomys_tridecemlineatus
ENSCPBG00000018291	-	100	88.423	ENSJJAG00000012404	Sf3a3	100	88.423	Jaculus_jaculus
ENSCPBG00000018291	-	100	82.435	ENSKMAG00000007632	sf3a3	100	82.435	Kryptolebias_marmoratus
ENSCPBG00000018291	-	100	77.328	ENSLBEG00000000816	sf3a3	100	77.328	Labrus_bergylta
ENSCPBG00000018291	-	100	84.431	ENSLOCG00000003273	sf3a3	100	84.431	Lepisosteus_oculatus
ENSCPBG00000018291	-	100	77.046	ENSLAFG00000008094	SF3A3	100	77.046	Loxodonta_africana
ENSCPBG00000018291	-	100	88.623	ENSMFAG00000043047	SF3A3	100	88.623	Macaca_fascicularis
ENSCPBG00000018291	-	93	73.799	ENSMFAG00000036706	-	100	75.546	Macaca_fascicularis
ENSCPBG00000018291	-	100	88.623	ENSMMUG00000023199	SF3A3	100	88.623	Macaca_mulatta
ENSCPBG00000018291	-	100	73.482	ENSMMUG00000038820	-	100	73.684	Macaca_mulatta
ENSCPBG00000018291	-	93	75.947	ENSMNEG00000028686	-	100	75.955	Macaca_nemestrina
ENSCPBG00000018291	-	100	88.623	ENSMNEG00000044291	SF3A3	100	88.623	Macaca_nemestrina
ENSCPBG00000018291	-	100	88.623	ENSMLEG00000030641	SF3A3	100	88.623	Mandrillus_leucophaeus
ENSCPBG00000018291	-	100	75.709	ENSMLEG00000036714	-	100	76.122	Mandrillus_leucophaeus
ENSCPBG00000018291	-	100	65.580	ENSMLEG00000028631	-	100	66.191	Mandrillus_leucophaeus
ENSCPBG00000018291	-	100	83.433	ENSMAMG00000001942	sf3a3	100	83.433	Mastacembelus_armatus
ENSCPBG00000018291	-	100	83.832	ENSMZEG00005016987	sf3a3	100	83.832	Maylandia_zebra
ENSCPBG00000018291	-	100	87.149	ENSMGAG00000002875	SF3A3	100	87.149	Meleagris_gallopavo
ENSCPBG00000018291	-	100	82.635	ENSMICG00000043548	-	100	82.635	Microcebus_murinus
ENSCPBG00000018291	-	100	84.431	ENSMICG00000001485	-	100	84.431	Microcebus_murinus
ENSCPBG00000018291	-	91	85.590	ENSMICG00000026541	-	100	85.590	Microcebus_murinus
ENSCPBG00000018291	-	94	82.869	ENSMOCG00000014565	-	97	81.370	Microtus_ochrogaster
ENSCPBG00000018291	-	100	85.887	ENSMOCG00000019939	-	100	85.887	Microtus_ochrogaster
ENSCPBG00000018291	-	100	83.234	ENSMMOG00000014307	sf3a3	100	83.234	Mola_mola
ENSCPBG00000018291	-	100	82.635	ENSMODG00000024045	-	100	82.635	Monodelphis_domestica
ENSCPBG00000018291	-	100	69.515	ENSMODG00000017729	-	100	68.544	Monodelphis_domestica
ENSCPBG00000018291	-	100	82.834	ENSMALG00000004836	sf3a3	99	85.651	Monopterus_albus
ENSCPBG00000018291	-	100	88.423	MGP_CAROLIEiJ_G0026449	Sf3a3	100	88.423	Mus_caroli
ENSCPBG00000018291	-	100	88.423	ENSMUSG00000028902	Sf3a3	100	88.423	Mus_musculus
ENSCPBG00000018291	-	100	91.494	MGP_PahariEiJ_G0028780	Sf3a3	100	91.494	Mus_pahari
ENSCPBG00000018291	-	100	88.423	MGP_SPRETEiJ_G0027428	Sf3a3	100	88.423	Mus_spretus
ENSCPBG00000018291	-	100	88.822	ENSMLUG00000000991	SF3A3	100	88.822	Myotis_lucifugus
ENSCPBG00000018291	-	100	87.657	ENSNGAG00000018032	Sf3a3	100	87.657	Nannospalax_galili
ENSCPBG00000018291	-	100	79.840	ENSNLEG00000011720	SF3A3	100	79.840	Nomascus_leucogenys
ENSCPBG00000018291	-	100	88.423	ENSOPRG00000012785	SF3A3	100	88.423	Ochotona_princeps
ENSCPBG00000018291	-	100	82.834	ENSODEG00000006854	-	100	85.429	Octodon_degus
ENSCPBG00000018291	-	100	73.307	ENSODEG00000000937	-	100	75.896	Octodon_degus
ENSCPBG00000018291	-	100	86.327	ENSODEG00000007470	-	100	86.327	Octodon_degus
ENSCPBG00000018291	-	100	77.890	ENSODEG00000018393	-	100	77.890	Octodon_degus
ENSCPBG00000018291	-	88	86.437	ENSONIG00000010296	sf3a3	100	86.437	Oreochromis_niloticus
ENSCPBG00000018291	-	93	90.414	ENSOANG00000002473	SF3A3	98	90.414	Ornithorhynchus_anatinus
ENSCPBG00000018291	-	100	88.423	ENSOCUG00000005407	SF3A3	100	88.423	Oryctolagus_cuniculus
ENSCPBG00000018291	-	100	82.036	ENSORLG00000008175	sf3a3	100	82.036	Oryzias_latipes
ENSCPBG00000018291	-	100	82.036	ENSORLG00020013708	sf3a3	100	82.036	Oryzias_latipes_hni
ENSCPBG00000018291	-	100	81.836	ENSORLG00015004104	sf3a3	100	81.836	Oryzias_latipes_hsok
ENSCPBG00000018291	-	100	82.435	ENSOMEG00000020177	sf3a3	100	82.435	Oryzias_melastigma
ENSCPBG00000018291	-	100	89.022	ENSOARG00000019950	SF3A3	100	89.022	Ovis_aries
ENSCPBG00000018291	-	100	67.465	ENSPPAG00000039955	-	100	66.866	Pan_paniscus
ENSCPBG00000018291	-	100	88.623	ENSPPAG00000034066	SF3A3	100	88.623	Pan_paniscus
ENSCPBG00000018291	-	100	88.822	ENSPPRG00000001258	SF3A3	100	88.822	Panthera_pardus
ENSCPBG00000018291	-	100	88.822	ENSPTIG00000007515	SF3A3	100	88.822	Panthera_tigris_altaica
ENSCPBG00000018291	-	100	88.623	ENSPTRG00000000559	SF3A3	100	88.623	Pan_troglodytes
ENSCPBG00000018291	-	100	68.463	ENSPTRG00000046013	-	100	67.864	Pan_troglodytes
ENSCPBG00000018291	-	100	88.623	ENSPANG00000021859	SF3A3	100	88.623	Papio_anubis
ENSCPBG00000018291	-	100	77.143	ENSPANG00000029393	-	100	78.571	Papio_anubis
ENSCPBG00000018291	-	86	82.955	ENSPANG00000031214	-	96	82.955	Papio_anubis
ENSCPBG00000018291	-	100	84.232	ENSPKIG00000004719	sf3a3	100	84.232	Paramormyrops_kingsleyae
ENSCPBG00000018291	-	100	89.066	ENSPSIG00000004273	SF3A3	100	89.066	Pelodiscus_sinensis
ENSCPBG00000018291	-	91	81.400	ENSPMGG00000003610	sf3a3	94	81.400	Periophthalmus_magnuspinnatus
ENSCPBG00000018291	-	100	88.423	ENSPEMG00000020805	Sf3a3	100	88.423	Peromyscus_maniculatus_bairdii
ENSCPBG00000018291	-	51	70.370	ENSPMAG00000001044	sf3a3	98	70.370	Petromyzon_marinus
ENSCPBG00000018291	-	100	89.621	ENSPCIG00000025719	SF3A3	100	89.621	Phascolarctos_cinereus
ENSCPBG00000018291	-	100	83.034	ENSPFOG00000005284	sf3a3	100	83.034	Poecilia_formosa
ENSCPBG00000018291	-	99	79.678	ENSPLAG00000003979	sf3a3	92	79.678	Poecilia_latipinna
ENSCPBG00000018291	-	77	80.418	ENSPMEG00000021132	sf3a3	88	80.418	Poecilia_mexicana
ENSCPBG00000018291	-	100	82.834	ENSPREG00000013802	sf3a3	100	82.834	Poecilia_reticulata
ENSCPBG00000018291	-	100	85.828	ENSPPYG00000001519	SF3A3	100	85.828	Pongo_abelii
ENSCPBG00000018291	-	100	83.433	ENSPCAG00000010734	SF3A3	100	83.433	Procavia_capensis
ENSCPBG00000018291	-	100	86.042	ENSPCOG00000020389	-	100	86.042	Propithecus_coquereli
ENSCPBG00000018291	-	100	72.854	ENSPCOG00000017131	-	100	72.854	Propithecus_coquereli
ENSCPBG00000018291	-	100	76.846	ENSPVAG00000010158	SF3A3	100	76.846	Pteropus_vampyrus
ENSCPBG00000018291	-	100	83.832	ENSPNYG00000000786	sf3a3	100	83.832	Pundamilia_nyererei
ENSCPBG00000018291	-	100	83.234	ENSPNAG00000010298	sf3a3	100	83.234	Pygocentrus_nattereri
ENSCPBG00000018291	-	100	88.423	ENSRNOG00000007629	Sf3a3	100	88.423	Rattus_norvegicus
ENSCPBG00000018291	-	100	88.623	ENSRBIG00000043567	SF3A3	100	88.623	Rhinopithecus_bieti
ENSCPBG00000018291	-	100	71.069	ENSRBIG00000041123	-	100	70.860	Rhinopithecus_bieti
ENSCPBG00000018291	-	100	65.424	ENSRBIG00000043833	-	100	65.424	Rhinopithecus_bieti
ENSCPBG00000018291	-	93	71.087	ENSRROG00000032346	-	100	71.304	Rhinopithecus_roxellana
ENSCPBG00000018291	-	100	88.623	ENSRROG00000033888	SF3A3	100	88.623	Rhinopithecus_roxellana
ENSCPBG00000018291	-	100	65.182	ENSSBOG00000026932	-	100	63.563	Saimiri_boliviensis_boliviensis
ENSCPBG00000018291	-	100	81.132	ENSSBOG00000032688	SF3A3	100	81.132	Saimiri_boliviensis_boliviensis
ENSCPBG00000018291	-	92	92.053	ENSSHAG00000014530	SF3A3	100	92.053	Sarcophilus_harrisii
ENSCPBG00000018291	-	100	85.163	ENSSFOG00015005975	sf3a3	100	85.163	Scleropages_formosus
ENSCPBG00000018291	-	100	83.034	ENSSMAG00000020213	sf3a3	100	83.034	Scophthalmus_maximus
ENSCPBG00000018291	-	100	81.048	ENSSDUG00000011590	sf3a3	100	81.048	Seriola_dumerili
ENSCPBG00000018291	-	100	83.633	ENSSLDG00000020635	sf3a3	100	83.633	Seriola_lalandi_dorsalis
ENSCPBG00000018291	-	100	89.621	ENSSPUG00000004010	SF3A3	100	89.621	Sphenodon_punctatus
ENSCPBG00000018291	-	100	83.633	ENSSPAG00000018653	sf3a3	100	83.633	Stegastes_partitus
ENSCPBG00000018291	-	100	88.822	ENSSSCG00000003643	SF3A3	100	88.822	Sus_scrofa
ENSCPBG00000018291	-	88	91.954	ENSTGUG00000001466	SF3A3	99	91.954	Taeniopygia_guttata
ENSCPBG00000018291	-	100	82.036	ENSTRUG00000009089	sf3a3	100	82.036	Takifugu_rubripes
ENSCPBG00000018291	-	100	81.113	ENSTNIG00000009800	sf3a3	100	81.113	Tetraodon_nigroviridis
ENSCPBG00000018291	-	100	76.693	ENSTBEG00000007614	SF3A3	100	76.693	Tupaia_belangeri
ENSCPBG00000018291	-	100	88.623	ENSTTRG00000013519	SF3A3	100	88.623	Tursiops_truncatus
ENSCPBG00000018291	-	100	88.822	ENSUAMG00000006134	SF3A3	100	88.822	Ursus_americanus
ENSCPBG00000018291	-	100	88.822	ENSUMAG00000021250	SF3A3	100	88.822	Ursus_maritimus
ENSCPBG00000018291	-	66	97.674	ENSVPAG00000004778	SF3A3	73	97.674	Vicugna_pacos
ENSCPBG00000018291	-	100	85.230	ENSVVUG00000022908	SF3A3	100	85.230	Vulpes_vulpes
ENSCPBG00000018291	-	100	84.431	ENSXETG00000022923	sf3a3	100	84.431	Xenopus_tropicalis
ENSCPBG00000018291	-	100	83.034	ENSXMAG00000017165	sf3a3	100	83.034	Xiphophorus_maculatus